RNA–Protein interactions for RNA: ENST00000568622.1

KIAA0556-208, Transcript of KIAA0556, humanhuman

TSL 2

Gene KIAA0556, Length 570 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA0556-208ENST00000568622 CCL23P55773 120 aa13.16□□□□□ -0.3
KIAA0556-208ENST00000568622 NSMFQ6X4W1 530 aa13.16□□□□□ -0.3
KIAA0556-208ENST00000568622 NOL8Q76FK4 1167 aaKnown RBP13.16□□□□□ -0.3
KIAA0556-208ENST00000568622 OTOP2Q7RTS6 562 aa13.16□□□□□ -0.3
KIAA0556-208ENST00000568622 ASB2Q96Q27 587 aa13.16□□□□□ -0.3
KIAA0556-208ENST00000568622 TMEM47Q9BQJ4 181 aa13.16□□□□□ -0.3
KIAA0556-208ENST00000568622 NKX2-4Q9H2Z4 354 aa13.16□□□□□ -0.3
KIAA0556-208ENST00000568622 THEGQ9P2T0 379 aa13.16□□□□□ -0.3
KIAA0556-208ENST00000568622 RAPGEFL1Q9UHV5 662 aa13.16□□□□□ -0.3
KIAA0556-208ENST00000568622 MSRAQ9UJ68 235 aa13.16□□□□□ -0.3
KIAA0556-208ENST00000568622 SCN10AQ9Y5Y9 1956 aa13.16□□□□□ -0.3
KIAA0556-208ENST00000568622 TNFRSF10AO00220 468 aa13.15□□□□□ -0.3
KIAA0556-208ENST00000568622 FGAP02671 866 aa13.15□□□□□ -0.3
KIAA0556-208ENST00000568622 PFKMP08237 780 aa13.15□□□□□ -0.3
KIAA0556-208ENST00000568622 PDHBP11177 359 aa13.15□□□□□ -0.3
KIAA0556-208ENST00000568622 TOP1P11387 765 aaKnown RBP13.15□□□□□ -0.3
KIAA0556-208ENST00000568622 SLC16A2P36021 539 aa13.15□□□□□ -0.3
KIAA0556-208ENST00000568622 SYDE2Q5VT97 1194 aa13.15□□□□□ -0.3
KIAA0556-208ENST00000568622 KIAA1211Q6ZU35 1233 aa13.15□□□□□ -0.3
KIAA0556-208ENST00000568622 CHMP4CQ96CF2 233 aa13.15□□□□□ -0.3
KIAA0556-208ENST00000568622 EVI5LQ96CN4 794 aa13.15□□□□□ -0.3
KIAA0556-208ENST00000568622 SLC28A3Q9HAS3 691 aa13.15□□□□□ -0.3
KIAA0556-208ENST00000568622 HELLSQ9NRZ9 838 aa13.15□□□□□ -0.3
KIAA0556-208ENST00000568622 POLR3EQ9NVU0 708 aa13.15□□□□□ -0.3
KIAA0556-208ENST00000568622 ADD3Q9UEY8 706 aaKnown RBP13.15□□□□□ -0.3
KIAA0556-208ENST00000568622 PCDHA11Q9Y5I1 949 aa13.15□□□□□ -0.3
KIAA0556-208ENST00000568622 WDR19Q8NEZ3 1342 aa13.14□□□□□ -0.31
KIAA0556-208ENST00000568622 A6NJR5 290 aa13.14□□□□□ -0.31
KIAA0556-208ENST00000568622 RANBP6O60518 1105 aaKnown RBP13.14□□□□□ -0.31
KIAA0556-208ENST00000568622 SUPT20HL2P0C7V6 817 aa13.14□□□□□ -0.31
KIAA0556-208ENST00000568622 POU3F3P20264 500 aaPredicted RBP13.14□□□□□ -0.31
KIAA0556-208ENST00000568622 COL9A1P20849 921 aa13.14□□□□□ -0.31
KIAA0556-208ENST00000568622 SLC30A10Q6XR72 485 aa13.14□□□□□ -0.31
KIAA0556-208ENST00000568622 RPUSD2Q8IZ73 545 aaKnown RBP13.14□□□□□ -0.31
KIAA0556-208ENST00000568622 SCLYQ96I15 445 aa13.14□□□□□ -0.31
KIAA0556-208ENST00000568622 WDR11Q9BZH6 1224 aa13.14□□□□□ -0.31
KIAA0556-208ENST00000568622 TRMT13Q9NUP7 481 aaKnown RBP13.14□□□□□ -0.31
KIAA0556-208ENST00000568622 PNMA2Q9UL42 364 aa13.14□□□□□ -0.31
KIAA0556-208ENST00000568622 ISY1Q9ULR0 285 aaKnown RBP13.14□□□□□ -0.31
KIAA0556-208ENST00000568622 TNKSO95271 1327 aa13.13□□□□□ -0.31
KIAA0556-208ENST00000568622 NKRFO15226 690 aaKnown RBP eCLIP13.13□□□□□ -0.31
KIAA0556-208ENST00000568622 CYP2C9P11712 490 aa13.13□□□□□ -0.31
KIAA0556-208ENST00000568622 CPT1AP50416 773 aa13.13□□□□□ -0.31
KIAA0556-208ENST00000568622 RABGGTBP53611 331 aa13.13□□□□□ -0.31
KIAA0556-208ENST00000568622 ZNF543Q08ER8 600 aa13.13□□□□□ -0.31
KIAA0556-208ENST00000568622 CCDC96Q2M329 555 aa13.13□□□□□ -0.31
KIAA0556-208ENST00000568622 NFRKBQ6P4R8 1299 aa13.13□□□□□ -0.31
KIAA0556-208ENST00000568622 DNERQ8NFT8 737 aa13.13□□□□□ -0.31
KIAA0556-208ENST00000568622 FAM227BQ96M60 508 aa13.13□□□□□ -0.31
KIAA0556-208ENST00000568622 TTC14Q96N46 770 aa13.13□□□□□ -0.31
KIAA0556-208ENST00000568622 MAF1Q9H063 256 aa13.13□□□□□ -0.31
KIAA0556-208ENST00000568622 SLC4A7Q9Y6M7 1214 aa13.13□□□□□ -0.31
KIAA0556-208ENST00000568622 A0A0D9SFI3 127 aa13.12□□□□□ -0.31
KIAA0556-208ENST00000568622 PITPNM1O00562 1244 aa13.12□□□□□ -0.31
KIAA0556-208ENST00000568622 HSPD1P10809 573 aaKnown RBP13.12□□□□□ -0.31
KIAA0556-208ENST00000568622 PCP11498 1178 aaKnown RBP13.12□□□□□ -0.31
KIAA0556-208ENST00000568622 MYOGP15173 224 aa13.12□□□□□ -0.31
KIAA0556-208ENST00000568622 PDE1AP54750 535 aa13.12□□□□□ -0.31
KIAA0556-208ENST00000568622 RPS6P62753 249 aaKnown RBP13.12□□□□□ -0.31
KIAA0556-208ENST00000568622 MRPS5P82675 430 aaKnown RBP13.12□□□□□ -0.31
KIAA0556-208ENST00000568622 PTPN11Q06124 597 aaPredicted RBP13.12□□□□□ -0.31
KIAA0556-208ENST00000568622 TTLL4Q14679 1199 aa13.12□□□□□ -0.31
KIAA0556-208ENST00000568622 MCMDC2Q4G0Z9 681 aa13.12□□□□□ -0.31
KIAA0556-208ENST00000568622 ZNF589Q86UQ0 364 aaPredicted RBP13.12□□□□□ -0.31
KIAA0556-208ENST00000568622 RGS22Q8NE09 1264 aa13.12□□□□□ -0.31
KIAA0556-208ENST00000568622 CTAGE1Q96RT6 745 aa13.12□□□□□ -0.31
KIAA0556-208ENST00000568622 MTG1Q9BT17 334 aaPredicted RBP13.12□□□□□ -0.31
KIAA0556-208ENST00000568622 TANC1Q9C0D5 1861 aa13.12□□□□□ -0.31
KIAA0556-208ENST00000568622 FRMPD2Q68DX3 1309 aaPredicted RBP13.12□□□□□ -0.31
KIAA0556-208ENST00000568622 IQCF3P0C7M6 154 aa13.11□□□□□ -0.31
KIAA0556-208ENST00000568622 ATP2A2P16615 1042 aaKnown RBP13.11□□□□□ -0.31
KIAA0556-208ENST00000568622 RFC2P35250 354 aa13.11□□□□□ -0.31
KIAA0556-208ENST00000568622 NBPF20Q3BBV1 942 aa13.11□□□□□ -0.31
KIAA0556-208ENST00000568622 PPP2R2DQ66LE6 453 aa13.11□□□□□ -0.31
KIAA0556-208ENST00000568622 CCDC62Q6P9F0 684 aa13.11□□□□□ -0.31
KIAA0556-208ENST00000568622 RNF207Q6ZRF8 634 aa13.11□□□□□ -0.31
KIAA0556-208ENST00000568622 OR6J1Q8NGC5 347 aa13.11□□□□□ -0.31
KIAA0556-208ENST00000568622 PHOSPHO2Q8TCD6 241 aa13.11□□□□□ -0.31
KIAA0556-208ENST00000568622 ADAMTS19Q8TE59 1207 aa13.11□□□□□ -0.31
KIAA0556-208ENST00000568622 SCFD2Q8WU76 684 aa13.11□□□□□ -0.31
KIAA0556-208ENST00000568622 PPM1EQ8WY54 764 aa13.11□□□□□ -0.31
KIAA0556-208ENST00000568622 GPCPD1Q9NPB8 672 aa13.11□□□□□ -0.31
KIAA0556-208ENST00000568622 MYO9BQ13459 2157 aa13.1□□□□□ -0.31
KIAA0556-208ENST00000568622 PTPDC1A2A3K4 754 aa13.1□□□□□ -0.31
KIAA0556-208ENST00000568622 KPNA6O60684 536 aa13.1□□□□□ -0.31
KIAA0556-208ENST00000568622 ARIH2O95376 493 aa13.1□□□□□ -0.31
KIAA0556-208ENST00000568622 BMP1P13497 986 aa13.1□□□□□ -0.31
KIAA0556-208ENST00000568622 IGFBP4P22692 258 aa13.1□□□□□ -0.31
KIAA0556-208ENST00000568622 NT5C2P49902 561 aa13.1□□□□□ -0.31
KIAA0556-208ENST00000568622 RBL2Q08999 1139 aa13.1□□□□□ -0.31
KIAA0556-208ENST00000568622 HDAC1Q13547 482 aaPredicted RBP13.1□□□□□ -0.31
KIAA0556-208ENST00000568622 GPNMBQ14956 572 aa13.1□□□□□ -0.31
KIAA0556-208ENST00000568622 PPP2R5BQ15173 497 aa13.1□□□□□ -0.31
KIAA0556-208ENST00000568622 SESTD1Q86VW0 696 aa13.1□□□□□ -0.31
KIAA0556-208ENST00000568622 TBC1D10CQ8IV04 446 aa13.1□□□□□ -0.31
KIAA0556-208ENST00000568622 COPS5Q92905 334 aa13.1□□□□□ -0.31
KIAA0556-208ENST00000568622 MTMR7Q9Y216 660 aa13.1□□□□□ -0.31
KIAA0556-208ENST00000568622 XIRP2A4UGR9 3374 aa13.1□□□□□ -0.31
KIAA0556-208ENST00000568622 REV3LO60673 3130 aa13.1□□□□□ -0.31
KIAA0556-208ENST00000568622 SCN5AQ14524 2016 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms