RNA–Protein interactions for RNA: ENST00000568535.1

BBS4-214, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 2

Gene BBS4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-214ENST00000568535 SHC4Q6S5L8 630 aa9.34□□□□□ -0.91
BBS4-214ENST00000568535 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.34□□□□□ -0.91
BBS4-214ENST00000568535 ERO1BQ86YB8 467 aa9.34□□□□□ -0.91
BBS4-214ENST00000568535 ELOA2Q8IYF1 753 aaPredicted RBP9.34□□□□□ -0.91
BBS4-214ENST00000568535 ANP32BQ92688 251 aaKnown RBP9.34□□□□□ -0.91
BBS4-214ENST00000568535 AK8Q96MA6 479 aa9.34□□□□□ -0.91
BBS4-214ENST00000568535 CLIC6Q96NY7 704 aa9.34□□□□□ -0.91
BBS4-214ENST00000568535 RAB34Q9BZG1 259 aa9.34□□□□□ -0.91
BBS4-214ENST00000568535 GOLPH3LQ9H4A5 285 aa9.34□□□□□ -0.91
BBS4-214ENST00000568535 TMEM260Q9NX78 707 aa9.34□□□□□ -0.91
BBS4-214ENST00000568535 MAP3K20Q9NYL2 800 aaKnown RBP9.34□□□□□ -0.91
BBS4-214ENST00000568535 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.34□□□□□ -0.91
BBS4-214ENST00000568535 USP25Q9UHP3 1055 aa9.34□□□□□ -0.91
BBS4-214ENST00000568535 PPP1R9AQ9ULJ8 1098 aa9.34□□□□□ -0.91
BBS4-214ENST00000568535 HPSEQ9Y251 543 aa9.34□□□□□ -0.91
BBS4-214ENST00000568535 RABGAP1Q9Y3P9 1069 aa9.34□□□□□ -0.91
BBS4-214ENST00000568535 TCHHQ07283 1943 aa9.33□□□□□ -0.92
BBS4-214ENST00000568535 FSD2A1L4K1 749 aa9.33□□□□□ -0.92
BBS4-214ENST00000568535 VWA3AA6NCI4 1184 aa9.33□□□□□ -0.92
BBS4-214ENST00000568535 CXCL11O14625 94 aa9.33□□□□□ -0.92
BBS4-214ENST00000568535 OR52Z1P0C646 297 aa9.33□□□□□ -0.92
BBS4-214ENST00000568535 OAZ1P54368 228 aa9.33□□□□□ -0.92
BBS4-214ENST00000568535 HMGCS2P54868 508 aa9.33□□□□□ -0.92
BBS4-214ENST00000568535 SNAP25P60880 206 aa9.33□□□□□ -0.92
BBS4-214ENST00000568535 UBE2SQ16763 222 aa9.33□□□□□ -0.92
BBS4-214ENST00000568535 TMEM266Q2M3C6 531 aa9.33□□□□□ -0.92
BBS4-214ENST00000568535 NOM1Q5C9Z4 860 aaKnown RBP9.33□□□□□ -0.92
BBS4-214ENST00000568535 MOXD1Q6UVY6 613 aa9.33□□□□□ -0.92
BBS4-214ENST00000568535 RBM43Q6ZSC3 357 aaKnown RBP9.33□□□□□ -0.92
BBS4-214ENST00000568535 LDHDQ86WU2 507 aa9.33□□□□□ -0.92
BBS4-214ENST00000568535 CNNM3Q8NE01 707 aa9.33□□□□□ -0.92
BBS4-214ENST00000568535 MAF1Q9H063 256 aa9.33□□□□□ -0.92
BBS4-214ENST00000568535 CSRNP2Q9H175 543 aa9.33□□□□□ -0.92
BBS4-214ENST00000568535 SLC38A10Q9HBR0 1119 aa9.33□□□□□ -0.92
BBS4-214ENST00000568535 CCDC39Q9UFE4 941 aa9.33□□□□□ -0.92
BBS4-214ENST00000568535 CCPG1Q9ULG6 757 aa9.33□□□□□ -0.92
BBS4-214ENST00000568535 MYH15Q9Y2K3 1946 aa9.33□□□□□ -0.92
BBS4-214ENST00000568535 MYPNQ86TC9 1320 aa9.32□□□□□ -0.92
BBS4-214ENST00000568535 CYP3A7-CYP3A51PA0A087WV96 503 aa9.32□□□□□ -0.92
BBS4-214ENST00000568535 MEIS2O14770 477 aa9.32□□□□□ -0.92
BBS4-214ENST00000568535 ADAMTS3O15072 1205 aa9.32□□□□□ -0.92
BBS4-214ENST00000568535 CFBP00751 764 aa9.32□□□□□ -0.92
BBS4-214ENST00000568535 CYP3A7P24462 503 aa9.32□□□□□ -0.92
BBS4-214ENST00000568535 DEKP35659 375 aaKnown RBP9.32□□□□□ -0.92
BBS4-214ENST00000568535 UBA7P41226 1012 aa9.32□□□□□ -0.92
BBS4-214ENST00000568535 FKBP1BP68106 108 aa9.32□□□□□ -0.92
BBS4-214ENST00000568535 PABPC4Q13310 644 aaKnown RBP eCLIP9.32□□□□□ -0.92
BBS4-214ENST00000568535 CALCRLQ16602 461 aa9.32□□□□□ -0.92
BBS4-214ENST00000568535 USP17L6PQ6QN14 398 aa9.32□□□□□ -0.92
BBS4-214ENST00000568535 CATSPERGQ6ZRH7 1159 aa9.32□□□□□ -0.92
BBS4-214ENST00000568535 CEP57L1Q8IYX8 460 aa9.32□□□□□ -0.92
BBS4-214ENST00000568535 C4orf32Q8N8J7 132 aa9.32□□□□□ -0.92
BBS4-214ENST00000568535 IQUBQ8NA54 791 aa9.32□□□□□ -0.92
BBS4-214ENST00000568535 PROCA1Q8NCQ7 364 aaPredicted RBP9.32□□□□□ -0.92
BBS4-214ENST00000568535 ANO3Q9BYT9 981 aa9.32□□□□□ -0.92
BBS4-214ENST00000568535 GRPEL1Q9HAV7 217 aa9.32□□□□□ -0.92
BBS4-214ENST00000568535 FBXO28Q9NVF7 368 aa9.32□□□□□ -0.92
BBS4-214ENST00000568535 DDX25Q9UHL0 483 aaKnown RBP9.32□□□□□ -0.92
BBS4-214ENST00000568535 FZD1Q9UP38 647 aa9.32□□□□□ -0.92
BBS4-214ENST00000568535 SNCAIPQ9Y6H5 919 aa9.32□□□□□ -0.92
BBS4-214ENST00000568535 SSC5DA1L4H1 1573 aa9.32□□□□□ -0.92
BBS4-214ENST00000568535 BAZ2BQ9UIF8 2168 aaKnown RBP9.31□□□□□ -0.92
BBS4-214ENST00000568535 SCN4AP35499 1836 aa9.31□□□□□ -0.92
BBS4-214ENST00000568535 SPDYE5A6NIY4 337 aa9.31□□□□□ -0.92
BBS4-214ENST00000568535 POTECB2RU33 542 aa9.31□□□□□ -0.92
BBS4-214ENST00000568535 VWA5AO00534 786 aa9.31□□□□□ -0.92
BBS4-214ENST00000568535 POLR2DO15514 142 aaKnown RBP9.31□□□□□ -0.92
BBS4-214ENST00000568535 ZNF76P36508 570 aa9.31□□□□□ -0.92
BBS4-214ENST00000568535 PPIL2Q13356 520 aa9.31□□□□□ -0.92
BBS4-214ENST00000568535 PDIA5Q14554 519 aa9.31□□□□□ -0.92
BBS4-214ENST00000568535 TKFCQ3LXA3 575 aa9.31□□□□□ -0.92
BBS4-214ENST00000568535 SPECC1Q5M775 1068 aa9.31□□□□□ -0.92
BBS4-214ENST00000568535 KRBA2Q6ZNG9 492 aa9.31□□□□□ -0.92
BBS4-214ENST00000568535 FASTKD5Q7L8L6 764 aaKnown RBP9.31□□□□□ -0.92
BBS4-214ENST00000568535 CKAP2LQ8IYA6 745 aa9.31□□□□□ -0.92
BBS4-214ENST00000568535 SLFN12Q8IYM2 578 aa9.31□□□□□ -0.92
BBS4-214ENST00000568535 CPXCR1Q8N123 301 aa9.31□□□□□ -0.92
BBS4-214ENST00000568535 RASSF8Q8NHQ8 419 aa9.31□□□□□ -0.92
BBS4-214ENST00000568535 SYMPKQ92797 1274 aaKnown RBP9.31□□□□□ -0.92
BBS4-214ENST00000568535 SLC10A4Q96EP9 437 aa9.31□□□□□ -0.92
BBS4-214ENST00000568535 NAT10Q9H0A0 1025 aaKnown RBP9.31□□□□□ -0.92
BBS4-214ENST00000568535 ELP3Q9H9T3 547 aa9.31□□□□□ -0.92
BBS4-214ENST00000568535 RRAGCQ9HB90 399 aa9.31□□□□□ -0.92
BBS4-214ENST00000568535 STK24Q9Y6E0 443 aa9.31□□□□□ -0.92
BBS4-214ENST00000568535 WNT7AO00755 349 aa9.3□□□□□ -0.92
BBS4-214ENST00000568535 ATP2A1O14983 1001 aa9.3□□□□□ -0.92
BBS4-214ENST00000568535 TBX3O15119 743 aa9.3□□□□□ -0.92
BBS4-214ENST00000568535 SMC2O95347 1197 aa9.3□□□□□ -0.92
BBS4-214ENST00000568535 CYP3A4P08684 503 aa9.3□□□□□ -0.92
BBS4-214ENST00000568535 ALAS1P13196 640 aa9.3□□□□□ -0.92
BBS4-214ENST00000568535 SREBF1P36956 1147 aa9.3□□□□□ -0.92
BBS4-214ENST00000568535 TXKP42681 527 aa9.3□□□□□ -0.92
BBS4-214ENST00000568535 FXR2P51116 673 aaKnown RBP eCLIP9.3□□□□□ -0.92
BBS4-214ENST00000568535 ARHGAP4P98171 946 aa9.3□□□□□ -0.92
BBS4-214ENST00000568535 TYRO3Q06418 890 aa9.3□□□□□ -0.92
BBS4-214ENST00000568535 STX1AQ16623 288 aa9.3□□□□□ -0.92
BBS4-214ENST00000568535 UVSSAQ2YD98 709 aa9.3□□□□□ -0.92
BBS4-214ENST00000568535 LONRF3Q496Y0 759 aa9.3□□□□□ -0.92
BBS4-214ENST00000568535 Q4G0T1 1027 aa9.3□□□□□ -0.92
BBS4-214ENST00000568535 FCHSD1Q86WN1 690 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms