RNA–Protein interactions for RNA: ENST00000568508.5

EPB42-207, Transcript of erythrocyte membrane protein band 4.2, humanhuman

TSL 5

Gene EPB42, Length 1,813 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-207ENST00000568508 PNMA3Q9UL41 463 aa17.33■□□□□ 0.36
EPB42-207ENST00000568508 HOXA13P31271 388 aaPredicted RBP17.32■□□□□ 0.36
EPB42-207ENST00000568508 TRAPPC10P48553 1259 aa17.32■□□□□ 0.36
EPB42-207ENST00000568508 KRT85P78386 507 aa17.32■□□□□ 0.36
EPB42-207ENST00000568508 PTPAQ15257 358 aa17.32■□□□□ 0.36
EPB42-207ENST00000568508 TKFCQ3LXA3 575 aa17.32■□□□□ 0.36
EPB42-207ENST00000568508 CYP4F22Q6NT55 531 aa17.32■□□□□ 0.36
EPB42-207ENST00000568508 SAMD3Q8N6K7 520 aa17.32■□□□□ 0.36
EPB42-207ENST00000568508 TMEM87AQ8NBN3 555 aa17.32■□□□□ 0.36
EPB42-207ENST00000568508 ZNF396Q96N95 335 aaPredicted RBP17.32■□□□□ 0.36
EPB42-207ENST00000568508 GBP4Q96PP9 640 aa17.32■□□□□ 0.36
EPB42-207ENST00000568508 PCDHB6Q9Y5E3 794 aa17.32■□□□□ 0.36
EPB42-207ENST00000568508 CCDC194A0A1B0GVG4 234 aa17.31■□□□□ 0.36
EPB42-207ENST00000568508 INF2Q27J81 1249 aa17.31■□□□□ 0.36
EPB42-207ENST00000568508 IFNL1Q8IU54 200 aa17.31■□□□□ 0.36
EPB42-207ENST00000568508 LINC00301Q8NCQ3 95 aa17.31■□□□□ 0.36
EPB42-207ENST00000568508 LEO1Q8WVC0 666 aaPredicted RBP17.31■□□□□ 0.36
EPB42-207ENST00000568508 PGBD1Q96JS3 809 aa17.31■□□□□ 0.36
EPB42-207ENST00000568508 MOV10L1Q9BXT6 1211 aaKnown RBP17.31■□□□□ 0.36
EPB42-207ENST00000568508 RNF146Q9NTX7 359 aa17.31■□□□□ 0.36
EPB42-207ENST00000568508 MAP3K20Q9NYL2 800 aaKnown RBP17.31■□□□□ 0.36
EPB42-207ENST00000568508 COL20A1Q9P218 1284 aa17.31■□□□□ 0.36
EPB42-207ENST00000568508 CFAP45Q9UL16 551 aa17.31■□□□□ 0.36
EPB42-207ENST00000568508 CTDP1Q9Y5B0 961 aaPredicted RBP17.31■□□□□ 0.36
EPB42-207ENST00000568508 GOLGA6L3A6NEY3 463 aa17.31■□□□□ 0.36
EPB42-207ENST00000568508 GCOM1H8Y6P7 765 aaPredicted RBP17.31■□□□□ 0.36
EPB42-207ENST00000568508 TRAK2O60296 914 aa17.31■□□□□ 0.36
EPB42-207ENST00000568508 CFBP00751 764 aa17.31■□□□□ 0.36
EPB42-207ENST00000568508 POLR2MP0CAP2 368 aa17.31■□□□□ 0.36
EPB42-207ENST00000568508 AP3B2Q13367 1082 aa17.31■□□□□ 0.36
EPB42-207ENST00000568508 NONOQ15233 471 aaKnown RBP eCLIP17.31■□□□□ 0.36
EPB42-207ENST00000568508 DEFB115Q30KQ5 88 aa17.31■□□□□ 0.36
EPB42-207ENST00000568508 ANO1Q5XXA6 986 aa17.31■□□□□ 0.36
EPB42-207ENST00000568508 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.31■□□□□ 0.36
EPB42-207ENST00000568508 TBCKQ8TEA7 893 aa17.31■□□□□ 0.36
EPB42-207ENST00000568508 GTF3C2Q8WUA4 911 aaPredicted RBP17.31■□□□□ 0.36
EPB42-207ENST00000568508 MAF1Q9H063 256 aa17.31■□□□□ 0.36
EPB42-207ENST00000568508 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.31■□□□□ 0.36
EPB42-207ENST00000568508 HOMER2Q9NSB8 354 aa17.31■□□□□ 0.36
EPB42-207ENST00000568508 MORF4L1Q9UBU8 362 aa17.31■□□□□ 0.36
EPB42-207ENST00000568508 ADGRA2Q96PE1 1338 aa17.3■□□□□ 0.36
EPB42-207ENST00000568508 FOSP01100 380 aaPredicted RBP17.3■□□□□ 0.36
EPB42-207ENST00000568508 SF3A1Q15459 793 aaKnown RBP17.3■□□□□ 0.36
EPB42-207ENST00000568508 MCTP2Q6DN12 878 aa17.3■□□□□ 0.36
EPB42-207ENST00000568508 MCF2L2Q86YR7 1114 aa17.3■□□□□ 0.36
EPB42-207ENST00000568508 SCAND2PQ9GZW5 306 aaPredicted RBP17.3■□□□□ 0.36
EPB42-207ENST00000568508 LMBRD1Q9NUN5 540 aa17.3■□□□□ 0.36
EPB42-207ENST00000568508 RPS6P62753 249 aaKnown RBP17.29■□□□□ 0.36
EPB42-207ENST00000568508 ERVK-9P63128 1117 aa17.29■□□□□ 0.36
EPB42-207ENST00000568508 ERVK-24P63145 666 aa17.29■□□□□ 0.36
EPB42-207ENST00000568508 CEBPZQ03701 1054 aaKnown RBP17.29■□□□□ 0.36
EPB42-207ENST00000568508 PLS1Q14651 629 aa17.29■□□□□ 0.36
EPB42-207ENST00000568508 SLC39A14Q15043 492 aa17.29■□□□□ 0.36
EPB42-207ENST00000568508 C4orf32Q8N8J7 132 aa17.29■□□□□ 0.36
EPB42-207ENST00000568508 CHST13Q8NET6 341 aa17.29■□□□□ 0.36
EPB42-207ENST00000568508 SYTL5Q8TDW5 730 aaPredicted RBP17.29■□□□□ 0.36
EPB42-207ENST00000568508 PAGR1Q9BTK6 254 aa17.29■□□□□ 0.36
EPB42-207ENST00000568508 ANO3Q9BYT9 981 aa17.29■□□□□ 0.36
EPB42-207ENST00000568508 RTN4Q9NQC3 1192 aaKnown RBP17.29■□□□□ 0.36
EPB42-207ENST00000568508 MORC2Q9Y6X9 1032 aaPredicted RBP17.29■□□□□ 0.36
EPB42-207ENST00000568508 YEATS4O95619 227 aa17.28■□□□□ 0.36
EPB42-207ENST00000568508 GCLCP48506 637 aaPredicted RBP17.28■□□□□ 0.36
EPB42-207ENST00000568508 SKOR2Q2VWA4 1001 aaPredicted RBP17.28■□□□□ 0.36
EPB42-207ENST00000568508 ELP1O95163 1332 aa17.28■□□□□ 0.36
EPB42-207ENST00000568508 FIBPO43427 364 aa17.28■□□□□ 0.36
EPB42-207ENST00000568508 SLC25A27O95847 323 aa17.28■□□□□ 0.36
EPB42-207ENST00000568508 NCLP19338 710 aaKnown RBP17.28■□□□□ 0.36
EPB42-207ENST00000568508 SREBF1P36956 1147 aa17.28■□□□□ 0.36
EPB42-207ENST00000568508 BAATQ14032 418 aaPredicted RBP17.28■□□□□ 0.36
EPB42-207ENST00000568508 TTC38Q5R3I4 469 aa17.28■□□□□ 0.36
EPB42-207ENST00000568508 NEK8Q86SG6 692 aa17.28■□□□□ 0.36
EPB42-207ENST00000568508 CAPNS2Q96L46 248 aa17.28■□□□□ 0.36
EPB42-207ENST00000568508 PARK7Q99497 189 aaKnown RBP17.28■□□□□ 0.36
EPB42-207ENST00000568508 ACAD9Q9H845 621 aa17.28■□□□□ 0.36
EPB42-207ENST00000568508 A1CFQ9NQ94 594 aaKnown RBP17.28■□□□□ 0.36
EPB42-207ENST00000568508 CYP39A1Q9NYL5 469 aa17.28■□□□□ 0.36
EPB42-207ENST00000568508 NOL7Q9UMY1 257 aaKnown RBP17.28■□□□□ 0.36
EPB42-207ENST00000568508 FRMPD4Q14CM0 1322 aa17.27■□□□□ 0.36
EPB42-207ENST00000568508 RPTORQ8N122 1335 aa17.27■□□□□ 0.36
EPB42-207ENST00000568508 ERCC3P19447 782 aa17.27■□□□□ 0.36
EPB42-207ENST00000568508 ATP2B1P20020 1258 aa17.27■□□□□ 0.36
EPB42-207ENST00000568508 USP11P51784 963 aa17.27■□□□□ 0.36
EPB42-207ENST00000568508 NOGQ13253 232 aa17.27■□□□□ 0.36
EPB42-207ENST00000568508 ZNF174Q15697 407 aa17.27■□□□□ 0.36
EPB42-207ENST00000568508 SLC30A10Q6XR72 485 aa17.27■□□□□ 0.36
EPB42-207ENST00000568508 FCHSD1Q86WN1 690 aa17.27■□□□□ 0.36
EPB42-207ENST00000568508 ANKRD13CQ8N6S4 541 aa17.27■□□□□ 0.36
EPB42-207ENST00000568508 SMCR8Q8TEV9 937 aaPredicted RBP17.27■□□□□ 0.36
EPB42-207ENST00000568508 SPATA32Q96LK8 384 aa17.27■□□□□ 0.36
EPB42-207ENST00000568508 MYH7BA7E2Y1 1941 aa17.27■□□□□ 0.36
EPB42-207ENST00000568508 CYP3A7-CYP3A51PA0A087WV96 503 aa17.26■□□□□ 0.35
EPB42-207ENST00000568508 AOC2O75106 756 aa17.26■□□□□ 0.35
EPB42-207ENST00000568508 PRPF40AO75400 957 aaKnown RBP17.26■□□□□ 0.35
EPB42-207ENST00000568508 CYP3A4P08684 503 aa17.26■□□□□ 0.35
EPB42-207ENST00000568508 BCRP11274 1271 aa17.26■□□□□ 0.35
EPB42-207ENST00000568508 CYP3A7P24462 503 aa17.26■□□□□ 0.35
EPB42-207ENST00000568508 SREBF2Q12772 1141 aa17.26■□□□□ 0.35
EPB42-207ENST00000568508 RNF207Q6ZRF8 634 aa17.26■□□□□ 0.35
EPB42-207ENST00000568508 SHCBP1Q8NEM2 672 aa17.26■□□□□ 0.35
EPB42-207ENST00000568508 GPRC5AQ8NFJ5 357 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms