RNA–Protein interactions for RNA: ENST00000568416.1

SPSB3-210, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 520 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-210ENST00000568416 KAT14Q9H8E8 782 aa22.17■■□□□ 1.14
SPSB3-210ENST00000568416 CABYRO75952 493 aa22.16■■□□□ 1.14
SPSB3-210ENST00000568416 CALML3P27482 149 aa22.16■■□□□ 1.14
SPSB3-210ENST00000568416 FSCN1Q16658 493 aaKnown RBP22.16■■□□□ 1.14
SPSB3-210ENST00000568416 CXCL17Q6UXB2 119 aa22.16■■□□□ 1.14
SPSB3-210ENST00000568416 KIAA1211Q6ZU35 1233 aa22.16■■□□□ 1.14
SPSB3-210ENST00000568416 ENAHQ8N8S7 591 aaPredicted RBP22.16■■□□□ 1.14
SPSB3-210ENST00000568416 SLC43A3Q8NBI5 491 aa22.16■■□□□ 1.14
SPSB3-210ENST00000568416 KRT23Q9C075 422 aa22.16■■□□□ 1.14
SPSB3-210ENST00000568416 TNKSO95271 1327 aa22.15■■□□□ 1.14
SPSB3-210ENST00000568416 RBM47A0AV96 593 aaKnown RBP22.15■■□□□ 1.14
SPSB3-210ENST00000568416 RPS6P62753 249 aaKnown RBP22.15■■□□□ 1.14
SPSB3-210ENST00000568416 SMAD3P84022 425 aaKnown RBP22.15■■□□□ 1.14
SPSB3-210ENST00000568416 RAD50Q92878 1312 aa22.14■■□□□ 1.14
SPSB3-210ENST00000568416 TLR3O15455 904 aaKnown RBP22.14■■□□□ 1.13
SPSB3-210ENST00000568416 CD4P01730 458 aa22.14■■□□□ 1.13
SPSB3-210ENST00000568416 EDNRBP24530 442 aa22.14■■□□□ 1.13
SPSB3-210ENST00000568416 DUSP28Q4G0W2 176 aa22.14■■□□□ 1.13
SPSB3-210ENST00000568416 ASPRV1Q53RT3 343 aa22.14■■□□□ 1.13
SPSB3-210ENST00000568416 MFSD5Q6N075 450 aa22.14■■□□□ 1.13
SPSB3-210ENST00000568416 RGS22Q8NE09 1264 aa22.14■■□□□ 1.13
SPSB3-210ENST00000568416 GUCD1Q96NT3 240 aa22.14■■□□□ 1.13
SPSB3-210ENST00000568416 CNNM2Q9H8M5 875 aa22.14■■□□□ 1.13
SPSB3-210ENST00000568416 GRIN2DO15399 1336 aa22.13■■□□□ 1.13
SPSB3-210ENST00000568416 ZEB2O60315 1214 aa22.13■■□□□ 1.13
SPSB3-210ENST00000568416 CDC37Q16543 378 aaPredicted RBP22.13■■□□□ 1.13
SPSB3-210ENST00000568416 USH1GQ495M9 461 aa22.13■■□□□ 1.13
SPSB3-210ENST00000568416 ZNF697Q5TEC3 545 aa22.13■■□□□ 1.13
SPSB3-210ENST00000568416 ADGRF4Q8IZF3 695 aa22.13■■□□□ 1.13
SPSB3-210ENST00000568416 SLC17A8Q8NDX2 589 aa22.13■■□□□ 1.13
SPSB3-210ENST00000568416 DNERQ8NFT8 737 aa22.13■■□□□ 1.13
SPSB3-210ENST00000568416 RNPC3Q96LT9 517 aaKnown RBP22.13■■□□□ 1.13
SPSB3-210ENST00000568416 WDR11Q9BZH6 1224 aa22.13■■□□□ 1.13
SPSB3-210ENST00000568416 IRX6P78412 446 aaPredicted RBP22.12■■□□□ 1.13
SPSB3-210ENST00000568416 ITGA7Q13683 1181 aa22.12■■□□□ 1.13
SPSB3-210ENST00000568416 FAM161BQ96MY7 647 aa22.12■■□□□ 1.13
SPSB3-210ENST00000568416 SEZ6LQ9BYH1 1024 aa22.12■■□□□ 1.13
SPSB3-210ENST00000568416 MAF1Q9H063 256 aa22.12■■□□□ 1.13
SPSB3-210ENST00000568416 PDE4DQ08499 809 aa22.11■■□□□ 1.13
SPSB3-210ENST00000568416 MPHOSPH6Q99547 160 aaKnown RBP22.11■■□□□ 1.13
SPSB3-210ENST00000568416 UBAC1Q9BSL1 405 aa22.11■■□□□ 1.13
SPSB3-210ENST00000568416 ABCB11O95342 1321 aa22.1■■□□□ 1.13
SPSB3-210ENST00000568416 PARP1P09874 1014 aaKnown RBP22.1■■□□□ 1.13
SPSB3-210ENST00000568416 CHMLP26374 656 aa22.1■■□□□ 1.13
SPSB3-210ENST00000568416 PPIGQ13427 754 aaKnown RBP eCLIP22.1■■□□□ 1.13
SPSB3-210ENST00000568416 SEC23AQ15436 765 aa22.1■■□□□ 1.13
SPSB3-210ENST00000568416 CYB5R4Q7L1T6 521 aa22.1■■□□□ 1.13
SPSB3-210ENST00000568416 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.1■■□□□ 1.13
SPSB3-210ENST00000568416 PPP1R12CQ9BZL4 782 aa22.1■■□□□ 1.13
SPSB3-210ENST00000568416 PSMC6P62333 389 aa22.09■■□□□ 1.13
SPSB3-210ENST00000568416 QRICH1Q2TAL8 776 aa22.09■■□□□ 1.13
SPSB3-210ENST00000568416 IFIT1BQ5T764 474 aaKnown RBP22.09■■□□□ 1.13
SPSB3-210ENST00000568416 C16orf59Q7L2K0 433 aa22.09■■□□□ 1.13
SPSB3-210ENST00000568416 TMEM199Q8N511 208 aa22.09■■□□□ 1.13
SPSB3-210ENST00000568416 RUFY2Q8WXA3 655 aa22.09■■□□□ 1.13
SPSB3-210ENST00000568416 TBC1D5Q92609 795 aa22.09■■□□□ 1.13
SPSB3-210ENST00000568416 SEMA6BQ9H3T3 888 aa22.09■■□□□ 1.13
SPSB3-210ENST00000568416 JMJD4Q9H9V9 463 aa22.09■■□□□ 1.13
SPSB3-210ENST00000568416 B4DLN1 442 aa22.08■■□□□ 1.13
SPSB3-210ENST00000568416 NKRFO15226 690 aaKnown RBP eCLIP22.08■■□□□ 1.13
SPSB3-210ENST00000568416 CYP21A2P08686 494 aa22.08■■□□□ 1.13
SPSB3-210ENST00000568416 CSF2RAP15509 400 aa22.08■■□□□ 1.13
SPSB3-210ENST00000568416 MRPL12P52815 198 aaKnown RBP22.08■■□□□ 1.13
SPSB3-210ENST00000568416 PTH1RQ03431 593 aa22.08■■□□□ 1.13
SPSB3-210ENST00000568416 OR6J1Q8NGC5 347 aa22.08■■□□□ 1.13
SPSB3-210ENST00000568416 SCFD2Q8WU76 684 aa22.08■■□□□ 1.13
SPSB3-210ENST00000568416 TTYH1Q9H313 450 aaPredicted RBP22.08■■□□□ 1.13
SPSB3-210ENST00000568416 POLR3EQ9NVU0 708 aa22.08■■□□□ 1.13
SPSB3-210ENST00000568416 B4GALT4O60513 344 aa22.07■■□□□ 1.12
SPSB3-210ENST00000568416 CYP2C18P33260 490 aa22.07■■□□□ 1.12
SPSB3-210ENST00000568416 CPT1AP50416 773 aa22.07■■□□□ 1.12
SPSB3-210ENST00000568416 PPP2R5BQ15173 497 aa22.07■■□□□ 1.12
SPSB3-210ENST00000568416 TMEM240Q5SV17 173 aa22.07■■□□□ 1.12
SPSB3-210ENST00000568416 FBXO11Q86XK2 927 aa22.07■■□□□ 1.12
SPSB3-210ENST00000568416 STAG2Q8N3U4 1231 aa22.07■■□□□ 1.12
SPSB3-210ENST00000568416 SYTL5Q8TDW5 730 aaPredicted RBP22.07■■□□□ 1.12
SPSB3-210ENST00000568416 VAT1LQ9HCJ6 419 aa22.07■■□□□ 1.12
SPSB3-210ENST00000568416 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.06■■□□□ 1.12
SPSB3-210ENST00000568416 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.06■■□□□ 1.12
SPSB3-210ENST00000568416 DHX16O60231 1041 aaKnown RBP22.06■■□□□ 1.12
SPSB3-210ENST00000568416 PURAQ00577 322 aaKnown RBP22.06■■□□□ 1.12
SPSB3-210ENST00000568416 RASIP1Q5U651 963 aa22.06■■□□□ 1.12
SPSB3-210ENST00000568416 MCF2L2Q86YR7 1114 aa22.06■■□□□ 1.12
SPSB3-210ENST00000568416 TAAR1Q96RJ0 339 aa22.06■■□□□ 1.12
SPSB3-210ENST00000568416 CDX2Q99626 313 aaPredicted RBP22.06■■□□□ 1.12
SPSB3-210ENST00000568416 TRPV6Q9H1D0 765 aa22.06■■□□□ 1.12
SPSB3-210ENST00000568416 HIPK3Q9H422 1215 aa22.06■■□□□ 1.12
SPSB3-210ENST00000568416 COL20A1Q9P218 1284 aa22.06■■□□□ 1.12
SPSB3-210ENST00000568416 MRPL11Q9Y3B7 192 aaKnown RBP22.06■■□□□ 1.12
SPSB3-210ENST00000568416 U3KPZ7 1027 aaPredicted RBP22.06■■□□□ 1.12
SPSB3-210ENST00000568416 UMODL1Q5DID0 1318 aa22.06■■□□□ 1.12
SPSB3-210ENST00000568416 TMEM265A0A087WTH1 108 aa22.05■■□□□ 1.12
SPSB3-210ENST00000568416 SGSM2O43147 1006 aa22.05■■□□□ 1.12
SPSB3-210ENST00000568416 MYL3P08590 195 aa22.05■■□□□ 1.12
SPSB3-210ENST00000568416 TRDNQ13061 729 aa22.05■■□□□ 1.12
SPSB3-210ENST00000568416 COPS5Q92905 334 aa22.05■■□□□ 1.12
SPSB3-210ENST00000568416 MTMR8Q96EF0 704 aa22.05■■□□□ 1.12
SPSB3-210ENST00000568416 MAD2L2Q9UI95 211 aa22.05■■□□□ 1.12
SPSB3-210ENST00000568416 PALM3A6NDB9 673 aaPredicted RBP22.04■■□□□ 1.12
SPSB3-210ENST00000568416 A6NJR5 290 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms