RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 PRCPP42785 496 aa20.41■□□□□ 0.86
SMPD3-211ENST00000568373 KMT5BQ4FZB7 885 aa20.41■□□□□ 0.86
SMPD3-211ENST00000568373 FAM151AQ8WW52 585 aa20.41■□□□□ 0.86
SMPD3-211ENST00000568373 NELFBQ8WX92 580 aa20.41■□□□□ 0.86
SMPD3-211ENST00000568373 CALML4Q96GE6 196 aa20.41■□□□□ 0.86
SMPD3-211ENST00000568373 CTAGE1Q96RT6 745 aa20.41■□□□□ 0.86
SMPD3-211ENST00000568373 RAB34Q9BZG1 259 aa20.41■□□□□ 0.86
SMPD3-211ENST00000568373 SYNPO2Q9UMS6 1093 aa20.41■□□□□ 0.86
SMPD3-211ENST00000568373 ZBTB12Q9Y330 459 aaPredicted RBP20.41■□□□□ 0.86
SMPD3-211ENST00000568373 RHOBTB3O94955 611 aa20.4■□□□□ 0.86
SMPD3-211ENST00000568373 NUP88Q99567 741 aaPredicted RBP20.4■□□□□ 0.86
SMPD3-211ENST00000568373 TMX1Q9H3N1 280 aa20.4■□□□□ 0.86
SMPD3-211ENST00000568373 LRWD1Q9UFC0 647 aa20.4■□□□□ 0.86
SMPD3-211ENST00000568373 GCFC2P16383 781 aaKnown RBP20.39■□□□□ 0.86
SMPD3-211ENST00000568373 PDIA5Q14554 519 aa20.39■□□□□ 0.86
SMPD3-211ENST00000568373 SPDYE2Q495Y8 402 aa20.39■□□□□ 0.86
SMPD3-211ENST00000568373 E4F1Q66K89 784 aaPredicted RBP20.39■□□□□ 0.86
SMPD3-211ENST00000568373 ADSSL1Q8N142 457 aa20.39■□□□□ 0.86
SMPD3-211ENST00000568373 ADD3Q9UEY8 706 aaKnown RBP20.39■□□□□ 0.86
SMPD3-211ENST00000568373 DDX25Q9UHL0 483 aaKnown RBP20.39■□□□□ 0.86
SMPD3-211ENST00000568373 ZNRF3Q9ULT6 936 aa20.39■□□□□ 0.86
SMPD3-211ENST00000568373 NYAP1Q6ZVC0 841 aa20.39■□□□□ 0.85
SMPD3-211ENST00000568373 NIM1KQ8IY84 436 aa20.39■□□□□ 0.85
SMPD3-211ENST00000568373 TRIM9Q9C026 710 aa20.39■□□□□ 0.85
SMPD3-211ENST00000568373 TRMT1Q9NXH9 659 aaKnown RBP20.39■□□□□ 0.85
SMPD3-211ENST00000568373 CNTNAP1P78357 1384 aa20.39■□□□□ 0.85
SMPD3-211ENST00000568373 A0A1W2PRG0 241 aa20.38■□□□□ 0.85
SMPD3-211ENST00000568373 BMP3P12645 472 aa20.38■□□□□ 0.85
SMPD3-211ENST00000568373 SYDE2Q5VT97 1194 aa20.38■□□□□ 0.85
SMPD3-211ENST00000568373 GIMAP8Q8ND71 665 aaPredicted RBP20.38■□□□□ 0.85
SMPD3-211ENST00000568373 NAP1L4Q99733 375 aaKnown RBP20.38■□□□□ 0.85
SMPD3-211ENST00000568373 C7orf25Q9BPX7 421 aa20.38■□□□□ 0.85
SMPD3-211ENST00000568373 AMNQ9BXJ7 453 aa20.38■□□□□ 0.85
SMPD3-211ENST00000568373 MAPK8IP1Q9UQF2 711 aa20.38■□□□□ 0.85
SMPD3-211ENST00000568373 USP17L15C9J2P7 530 aa20.38■□□□□ 0.85
SMPD3-211ENST00000568373 USP17L13C9JLJ4 530 aa20.38■□□□□ 0.85
SMPD3-211ENST00000568373 USP17L11C9JVI0 530 aa20.38■□□□□ 0.85
SMPD3-211ENST00000568373 USP17L18D6R9N7 530 aa20.38■□□□□ 0.85
SMPD3-211ENST00000568373 USP17L22D6RA61 530 aa20.38■□□□□ 0.85
SMPD3-211ENST00000568373 USP17L17D6RBQ6 530 aa20.38■□□□□ 0.85
SMPD3-211ENST00000568373 USP17L19D6RCP7 530 aa20.38■□□□□ 0.85
SMPD3-211ENST00000568373 USP17L20D6RJB6 530 aa20.38■□□□□ 0.85
SMPD3-211ENST00000568373 COBLO75128 1261 aa20.38■□□□□ 0.85
SMPD3-211ENST00000568373 AMPD3Q01432 767 aa20.38■□□□□ 0.85
SMPD3-211ENST00000568373 USP17L24Q0WX57 530 aa20.38■□□□□ 0.85
SMPD3-211ENST00000568373 GRB10Q13322 594 aa20.38■□□□□ 0.85
SMPD3-211ENST00000568373 FKBP1CQ5VVH2 108 aa20.38■□□□□ 0.85
SMPD3-211ENST00000568373 USP17L6PQ6QN14 398 aa20.38■□□□□ 0.85
SMPD3-211ENST00000568373 AGBL3Q8NEM8 1001 aa20.38■□□□□ 0.85
SMPD3-211ENST00000568373 STK17AQ9UEE5 414 aa20.38■□□□□ 0.85
SMPD3-211ENST00000568373 DYNC1I1O14576 645 aa20.37■□□□□ 0.85
SMPD3-211ENST00000568373 IKQ13123 557 aaPredicted RBP20.37■□□□□ 0.85
SMPD3-211ENST00000568373 PTPN14Q15678 1187 aa20.37■□□□□ 0.85
SMPD3-211ENST00000568373 FILIP1LQ4L180 1135 aa20.37■□□□□ 0.85
SMPD3-211ENST00000568373 BTNL9Q6UXG8 535 aa20.37■□□□□ 0.85
SMPD3-211ENST00000568373 MTMR14Q8NCE2 650 aa20.37■□□□□ 0.85
SMPD3-211ENST00000568373 POTEMA6NI47 508 aa20.36■□□□□ 0.85
SMPD3-211ENST00000568373 TEX33O43247 280 aa20.36■□□□□ 0.85
SMPD3-211ENST00000568373 GTF2F1P35269 517 aaKnown RBP eCLIP20.36■□□□□ 0.85
SMPD3-211ENST00000568373 SPAG1Q07617 926 aa20.36■□□□□ 0.85
SMPD3-211ENST00000568373 GOLGA8FQ08AF8 430 aa20.36■□□□□ 0.85
SMPD3-211ENST00000568373 GOLGA8DPQ0D2H9 430 aa20.36■□□□□ 0.85
SMPD3-211ENST00000568373 STIM1Q13586 685 aa20.36■□□□□ 0.85
SMPD3-211ENST00000568373 HAS1Q92839 578 aa20.36■□□□□ 0.85
SMPD3-211ENST00000568373 CCDC47Q96A33 483 aaKnown RBP20.36■□□□□ 0.85
SMPD3-211ENST00000568373 PIM2Q9P1W9 311 aa20.36■□□□□ 0.85
SMPD3-211ENST00000568373 LIMA1Q9UHB6 759 aaKnown RBP20.36■□□□□ 0.85
SMPD3-211ENST00000568373 LRRC10BA6NIK2 292 aa20.36■□□□□ 0.85
SMPD3-211ENST00000568373 PBX1P40424 430 aa20.36■□□□□ 0.85
SMPD3-211ENST00000568373 AP3B2Q13367 1082 aa20.36■□□□□ 0.85
SMPD3-211ENST00000568373 FBXO11Q86XK2 927 aa20.36■□□□□ 0.85
SMPD3-211ENST00000568373 TC2NQ8N9U0 490 aa20.36■□□□□ 0.85
SMPD3-211ENST00000568373 CDK5RAP3Q96JB5 506 aa20.36■□□□□ 0.85
SMPD3-211ENST00000568373 PNMA5Q96PV4 448 aa20.36■□□□□ 0.85
SMPD3-211ENST00000568373 ANO3Q9BYT9 981 aa20.36■□□□□ 0.85
SMPD3-211ENST00000568373 VEZTQ9HBM0 779 aa20.36■□□□□ 0.85
SMPD3-211ENST00000568373 ARHGEF10LQ9HCE6 1279 aa20.36■□□□□ 0.85
SMPD3-211ENST00000568373 H7C1D1 291 aa20.35■□□□□ 0.85
SMPD3-211ENST00000568373 MEIS2O14770 477 aa20.35■□□□□ 0.85
SMPD3-211ENST00000568373 USP11P51784 963 aa20.35■□□□□ 0.85
SMPD3-211ENST00000568373 TGFB2P61812 414 aa20.35■□□□□ 0.85
SMPD3-211ENST00000568373 ASIC1P78348 528 aa20.35■□□□□ 0.85
SMPD3-211ENST00000568373 KRT31Q15323 416 aa20.35■□□□□ 0.85
SMPD3-211ENST00000568373 KRT79Q5XKE5 535 aa20.35■□□□□ 0.85
SMPD3-211ENST00000568373 CEP135Q66GS9 1140 aa20.35■□□□□ 0.85
SMPD3-211ENST00000568373 TMEM139Q8IV31 216 aa20.35■□□□□ 0.85
SMPD3-211ENST00000568373 BLOC1S4Q9NUP1 217 aa20.35■□□□□ 0.85
SMPD3-211ENST00000568373 PSMA7O14818 248 aa20.34■□□□□ 0.85
SMPD3-211ENST00000568373 SNAP25P60880 206 aa20.34■□□□□ 0.85
SMPD3-211ENST00000568373 MCTP2Q6DN12 878 aa20.34■□□□□ 0.85
SMPD3-211ENST00000568373 SV2BQ7L1I2 683 aa20.34■□□□□ 0.85
SMPD3-211ENST00000568373 SNX29Q8TEQ0 813 aa20.34■□□□□ 0.85
SMPD3-211ENST00000568373 PPP1R13BQ96KQ4 1090 aa20.34■□□□□ 0.85
SMPD3-211ENST00000568373 GTPBP4Q9BZE4 634 aaKnown RBP20.34■□□□□ 0.85
SMPD3-211ENST00000568373 EXOC1Q9NV70 894 aa20.34■□□□□ 0.85
SMPD3-211ENST00000568373 ZBTB21Q9ULJ3 1066 aa20.34■□□□□ 0.85
SMPD3-211ENST00000568373 PAXBP1Q9Y5B6 917 aa20.34■□□□□ 0.85
SMPD3-211ENST00000568373 RIOK3O14730 519 aaKnown RBP20.34■□□□□ 0.85
SMPD3-211ENST00000568373 ECE1P42892 770 aa20.34■□□□□ 0.85
SMPD3-211ENST00000568373 CXCL9Q07325 125 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms