RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 LRRC41Q15345 812 aa5.5□□□□□ -1.53
HERPUD1-213ENST00000568358 TKFCQ3LXA3 575 aa5.5□□□□□ -1.53
HERPUD1-213ENST00000568358 LRIT3Q3SXY7 679 aa5.5□□□□□ -1.53
HERPUD1-213ENST00000568358 MCMDC2Q4G0Z9 681 aa5.5□□□□□ -1.53
HERPUD1-213ENST00000568358 FAM47AQ5JRC9 791 aa5.5□□□□□ -1.53
HERPUD1-213ENST00000568358 RRP12Q5JTH9 1297 aaKnown RBP5.5□□□□□ -1.53
HERPUD1-213ENST00000568358 RCSD1Q6JBY9 416 aa5.5□□□□□ -1.53
HERPUD1-213ENST00000568358 METTL3Q86U44 580 aaKnown RBP5.5□□□□□ -1.53
HERPUD1-213ENST00000568358 LRRC47Q8N1G4 583 aaKnown RBP5.5□□□□□ -1.53
HERPUD1-213ENST00000568358 PCSK9Q8NBP7 692 aaKnown RBP5.5□□□□□ -1.53
HERPUD1-213ENST00000568358 PI4K2BQ8TCG2 481 aa5.5□□□□□ -1.53
HERPUD1-213ENST00000568358 STAG1Q8WVM7 1258 aa5.5□□□□□ -1.53
HERPUD1-213ENST00000568358 RILPL2Q969X0 211 aa5.5□□□□□ -1.53
HERPUD1-213ENST00000568358 LRCH3Q96II8 777 aa5.5□□□□□ -1.53
HERPUD1-213ENST00000568358 CRBNQ96SW2 442 aa5.5□□□□□ -1.53
HERPUD1-213ENST00000568358 SEC62Q99442 399 aaKnown RBP5.5□□□□□ -1.53
HERPUD1-213ENST00000568358 TSEN34Q9BSV6 310 aaKnown RBP5.5□□□□□ -1.53
HERPUD1-213ENST00000568358 ABHD16BQ9H3Z7 469 aa5.5□□□□□ -1.53
HERPUD1-213ENST00000568358 SLC38A10Q9HBR0 1119 aa5.5□□□□□ -1.53
HERPUD1-213ENST00000568358 RAVER2Q9HCJ3 691 aaKnown RBP5.5□□□□□ -1.53
HERPUD1-213ENST00000568358 ZHX1Q9UKY1 873 aaPredicted RBP5.5□□□□□ -1.53
HERPUD1-213ENST00000568358 PNMA2Q9UL42 364 aa5.5□□□□□ -1.53
HERPUD1-213ENST00000568358 ZNF214Q9UL59 606 aaPredicted RBP5.5□□□□□ -1.53
HERPUD1-213ENST00000568358 TACC3Q9Y6A5 838 aa5.5□□□□□ -1.53
HERPUD1-213ENST00000568358 A0A0G2JMZ2 1700 aa5.5□□□□□ -1.53
HERPUD1-213ENST00000568358 ROBO3Q96MS0 1386 aa5.5□□□□□ -1.53
HERPUD1-213ENST00000568358 MYO9BQ13459 2157 aa5.5□□□□□ -1.53
HERPUD1-213ENST00000568358 GREB1LQ9C091 1923 aaPredicted RBP5.5□□□□□ -1.53
HERPUD1-213ENST00000568358 MROH7Q68CQ1 1323 aa5.49□□□□□ -1.53
HERPUD1-213ENST00000568358 MYH6P13533 1939 aa5.49□□□□□ -1.53
HERPUD1-213ENST00000568358 IGKV6D-41A0A0C4DH26 115 aa5.49□□□□□ -1.53
HERPUD1-213ENST00000568358 MOXD2PA6NHM9 499 aa5.49□□□□□ -1.53
HERPUD1-213ENST00000568358 ASB14A6NK59 587 aa5.49□□□□□ -1.53
HERPUD1-213ENST00000568358 B4DLN1 442 aa5.49□□□□□ -1.53
HERPUD1-213ENST00000568358 PLA2G6O60733 806 aa5.49□□□□□ -1.53
HERPUD1-213ENST00000568358 DUSP11O75319 330 aaKnown RBP5.49□□□□□ -1.53
HERPUD1-213ENST00000568358 PGK1P00558 417 aa5.49□□□□□ -1.53
HERPUD1-213ENST00000568358 IGHA2P01877 340 aa5.49□□□□□ -1.53
HERPUD1-213ENST00000568358 ALAS1P13196 640 aa5.49□□□□□ -1.53
HERPUD1-213ENST00000568358 RAG1P15918 1043 aa5.49□□□□□ -1.53
HERPUD1-213ENST00000568358 MRPL12P52815 198 aaKnown RBP5.49□□□□□ -1.53
HERPUD1-213ENST00000568358 PDE1AP54750 535 aa5.49□□□□□ -1.53
HERPUD1-213ENST00000568358 CTDSPL2Q05D32 466 aa5.49□□□□□ -1.53
HERPUD1-213ENST00000568358 ACVR2BQ13705 512 aa5.49□□□□□ -1.53
HERPUD1-213ENST00000568358 SF3A1Q15459 793 aaKnown RBP5.49□□□□□ -1.53
HERPUD1-213ENST00000568358 ALX1Q15699 326 aa5.49□□□□□ -1.53
HERPUD1-213ENST00000568358 KCNA10Q16322 511 aa5.49□□□□□ -1.53
HERPUD1-213ENST00000568358 CCDC96Q2M329 555 aa5.49□□□□□ -1.53
HERPUD1-213ENST00000568358 TRIM60Q495X7 471 aa5.49□□□□□ -1.53
HERPUD1-213ENST00000568358 C1orf53Q5VUE5 145 aa5.49□□□□□ -1.53
HERPUD1-213ENST00000568358 CCDC174Q6PII3 467 aa5.49□□□□□ -1.53
HERPUD1-213ENST00000568358 MAMDC4Q6UXC1 1216 aa5.49□□□□□ -1.53
HERPUD1-213ENST00000568358 MFSD6Q6ZSS7 791 aa5.49□□□□□ -1.53
HERPUD1-213ENST00000568358 REPS2Q8NFH8 660 aa5.49□□□□□ -1.53
HERPUD1-213ENST00000568358 DDX12PQ92771 950 aa5.49□□□□□ -1.53
HERPUD1-213ENST00000568358 CHMP4CQ96CF2 233 aa5.49□□□□□ -1.53
HERPUD1-213ENST00000568358 GMCL1Q96IK5 515 aa5.49□□□□□ -1.53
HERPUD1-213ENST00000568358 GLT1D1Q96MS3 346 aa5.49□□□□□ -1.53
HERPUD1-213ENST00000568358 YTHDC1Q96MU7 727 aaKnown RBP5.49□□□□□ -1.53
HERPUD1-213ENST00000568358 TRERF1Q96PN7 1200 aa5.49□□□□□ -1.53
HERPUD1-213ENST00000568358 MPHOSPH6Q99547 160 aaKnown RBP5.49□□□□□ -1.53
HERPUD1-213ENST00000568358 RNF41Q9H4P4 317 aaPredicted RBP5.49□□□□□ -1.53
HERPUD1-213ENST00000568358 ACAD9Q9H845 621 aa5.49□□□□□ -1.53
HERPUD1-213ENST00000568358 EPB41L4AQ9HCS5 686 aaPredicted RBP5.49□□□□□ -1.53
HERPUD1-213ENST00000568358 STARD7Q9NQZ5 370 aa5.49□□□□□ -1.53
HERPUD1-213ENST00000568358 HOMER2Q9NSB8 354 aa5.49□□□□□ -1.53
HERPUD1-213ENST00000568358 TMEM39AQ9NV64 488 aa5.49□□□□□ -1.53
HERPUD1-213ENST00000568358 PHF24Q9UPV7 400 aa5.49□□□□□ -1.53
HERPUD1-213ENST00000568358 RIPK3Q9Y572 518 aa5.49□□□□□ -1.53
HERPUD1-213ENST00000568358 MAFBQ9Y5Q3 323 aaPredicted RBP5.49□□□□□ -1.53
HERPUD1-213ENST00000568358 PLIN4Q96Q06 1357 aa5.48□□□□□ -1.53
HERPUD1-213ENST00000568358 DNAJC25-GNG10A0A024R161 153 aa5.48□□□□□ -1.53
HERPUD1-213ENST00000568358 A0A1W2PQ45 241 aaPredicted RBP5.48□□□□□ -1.53
HERPUD1-213ENST00000568358 A0A1W2PQY0 241 aa5.48□□□□□ -1.53
HERPUD1-213ENST00000568358 SOWAHDA6NJG2 315 aa5.48□□□□□ -1.53
HERPUD1-213ENST00000568358 HIP1O00291 1037 aa5.48□□□□□ -1.53
HERPUD1-213ENST00000568358 SOX1O00570 391 aaPredicted RBP5.48□□□□□ -1.53
HERPUD1-213ENST00000568358 TLR3O15455 904 aaKnown RBP5.48□□□□□ -1.53
HERPUD1-213ENST00000568358 PQBP1O60828 265 aaKnown RBP5.48□□□□□ -1.53
HERPUD1-213ENST00000568358 SNAI1O95863 264 aaPredicted RBP5.48□□□□□ -1.53
HERPUD1-213ENST00000568358 FGAP02671 866 aa5.48□□□□□ -1.53
HERPUD1-213ENST00000568358 CLTBP09497 229 aa5.48□□□□□ -1.53
HERPUD1-213ENST00000568358 C6orf222P0C671 652 aaPredicted RBP5.48□□□□□ -1.53
HERPUD1-213ENST00000568358 ZNF865P0CJ78 1059 aaPredicted RBP5.48□□□□□ -1.53
HERPUD1-213ENST00000568358 TOP1P11387 765 aaKnown RBP5.48□□□□□ -1.53
HERPUD1-213ENST00000568358 PCP11498 1178 aaKnown RBP5.48□□□□□ -1.53
HERPUD1-213ENST00000568358 TAL1P17542 331 aaPredicted RBP5.48□□□□□ -1.53
HERPUD1-213ENST00000568358 SOX11P35716 441 aa5.48□□□□□ -1.53
HERPUD1-213ENST00000568358 TNFAIP2Q03169 654 aa5.48□□□□□ -1.53
HERPUD1-213ENST00000568358 TLE2Q04725 743 aa5.48□□□□□ -1.53
HERPUD1-213ENST00000568358 CCDC144BQ3MJ40 725 aa5.48□□□□□ -1.53
HERPUD1-213ENST00000568358 CCDC178Q5BJE1 867 aa5.48□□□□□ -1.53
HERPUD1-213ENST00000568358 GNASQ5JWF2 1037 aa5.48□□□□□ -1.53
HERPUD1-213ENST00000568358 ZNF697Q5TEC3 545 aa5.48□□□□□ -1.53
HERPUD1-213ENST00000568358 CCDC129Q6ZRS4 1044 aa5.48□□□□□ -1.53
HERPUD1-213ENST00000568358 KCTD1Q719H9 257 aa5.48□□□□□ -1.53
HERPUD1-213ENST00000568358 ARMCX2Q7L311 632 aa5.48□□□□□ -1.53
HERPUD1-213ENST00000568358 CCDC144CPQ8IYA2 1237 aa5.48□□□□□ -1.53
HERPUD1-213ENST00000568358 OTUD7AQ8TE49 926 aaPredicted RBP5.48□□□□□ -1.53
HERPUD1-213ENST00000568358 DCAF4Q8WV16 495 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms