RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 A0A0U1RQG5 324 aaPredicted RBP14.29□□□□□ -0.12
GTF3C1-208ENST00000567843 ARVCFO00192 962 aa14.29□□□□□ -0.12
GTF3C1-208ENST00000567843 PARP1P09874 1014 aaKnown RBP14.29□□□□□ -0.12
GTF3C1-208ENST00000567843 CDK7P50613 346 aa14.29□□□□□ -0.12
GTF3C1-208ENST00000567843 PDE4DQ08499 809 aa14.29□□□□□ -0.12
GTF3C1-208ENST00000567843 QRICH1Q2TAL8 776 aa14.29□□□□□ -0.12
GTF3C1-208ENST00000567843 IFIT1BQ5T764 474 aaKnown RBP14.29□□□□□ -0.12
GTF3C1-208ENST00000567843 IQSEC1Q6DN90 963 aa14.29□□□□□ -0.12
GTF3C1-208ENST00000567843 CHST3Q7LGC8 479 aa14.29□□□□□ -0.12
GTF3C1-208ENST00000567843 PPP1R13LQ8WUF5 828 aa14.29□□□□□ -0.12
GTF3C1-208ENST00000567843 TOX2Q96NM4 488 aa14.29□□□□□ -0.12
GTF3C1-208ENST00000567843 WDR11Q9BZH6 1224 aa14.29□□□□□ -0.12
GTF3C1-208ENST00000567843 CNNM2Q9H8M5 875 aa14.29□□□□□ -0.12
GTF3C1-208ENST00000567843 SENP2Q9HC62 589 aa14.29□□□□□ -0.12
GTF3C1-208ENST00000567843 MTMR10Q9NXD2 777 aa14.29□□□□□ -0.12
GTF3C1-208ENST00000567843 CYP21A2P08686 494 aa14.28□□□□□ -0.12
GTF3C1-208ENST00000567843 FPGSQ05932 587 aa14.28□□□□□ -0.12
GTF3C1-208ENST00000567843 LTBP2Q14767 1821 aa14.28□□□□□ -0.12
GTF3C1-208ENST00000567843 WDR19Q8NEZ3 1342 aa14.28□□□□□ -0.12
GTF3C1-208ENST00000567843 MORC4Q8TE76 937 aa14.28□□□□□ -0.12
GTF3C1-208ENST00000567843 RUFY2Q8WXA3 655 aa14.28□□□□□ -0.12
GTF3C1-208ENST00000567843 COPS5Q92905 334 aa14.28□□□□□ -0.12
GTF3C1-208ENST00000567843 JMJD4Q9H9V9 463 aa14.28□□□□□ -0.12
GTF3C1-208ENST00000567843 TBX21Q9UL17 535 aa14.28□□□□□ -0.12
GTF3C1-208ENST00000567843 GRIN2DO15399 1336 aa14.27□□□□□ -0.12
GTF3C1-208ENST00000567843 RAD50Q92878 1312 aa14.27□□□□□ -0.12
GTF3C1-208ENST00000567843 TIMP1P01033 207 aa14.27□□□□□ -0.13
GTF3C1-208ENST00000567843 MYL3P08590 195 aa14.27□□□□□ -0.13
GTF3C1-208ENST00000567843 TRDNQ13061 729 aa14.27□□□□□ -0.13
GTF3C1-208ENST00000567843 ITGA7Q13683 1181 aa14.27□□□□□ -0.13
GTF3C1-208ENST00000567843 SEC23AQ15436 765 aa14.27□□□□□ -0.13
GTF3C1-208ENST00000567843 ASPRV1Q53RT3 343 aa14.27□□□□□ -0.13
GTF3C1-208ENST00000567843 STOX1Q6ZVD7 989 aa14.27□□□□□ -0.13
GTF3C1-208ENST00000567843 FAM126BQ8IXS8 530 aa14.27□□□□□ -0.13
GTF3C1-208ENST00000567843 RNPC3Q96LT9 517 aaKnown RBP14.27□□□□□ -0.13
GTF3C1-208ENST00000567843 TAAR1Q96RJ0 339 aa14.27□□□□□ -0.13
GTF3C1-208ENST00000567843 TRPV6Q9H1D0 765 aa14.27□□□□□ -0.13
GTF3C1-208ENST00000567843 COL20A1Q9P218 1284 aa14.27□□□□□ -0.13
GTF3C1-208ENST00000567843 LCTP09848 1927 aa14.27□□□□□ -0.13
GTF3C1-208ENST00000567843 IFIT3O14879 490 aaKnown RBP14.26□□□□□ -0.13
GTF3C1-208ENST00000567843 TLR3O15455 904 aaKnown RBP14.26□□□□□ -0.13
GTF3C1-208ENST00000567843 SGSM2O43147 1006 aa14.26□□□□□ -0.13
GTF3C1-208ENST00000567843 ZEB2O60315 1214 aa14.26□□□□□ -0.13
GTF3C1-208ENST00000567843 ACRP10323 421 aa14.26□□□□□ -0.13
GTF3C1-208ENST00000567843 CYP2C18P33260 490 aa14.26□□□□□ -0.13
GTF3C1-208ENST00000567843 CHMP4BP1P59074 171 aa14.26□□□□□ -0.13
GTF3C1-208ENST00000567843 NKX3-2P78367 333 aa14.26□□□□□ -0.13
GTF3C1-208ENST00000567843 DUSP28Q4G0W2 176 aa14.26□□□□□ -0.13
GTF3C1-208ENST00000567843 GPR153Q6NV75 609 aa14.26□□□□□ -0.13
GTF3C1-208ENST00000567843 FBXO11Q86XK2 927 aa14.26□□□□□ -0.13
GTF3C1-208ENST00000567843 HOMER1Q86YM7 354 aa14.26□□□□□ -0.13
GTF3C1-208ENST00000567843 OR6J1Q8NGC5 347 aa14.26□□□□□ -0.13
GTF3C1-208ENST00000567843 SYTL5Q8TDW5 730 aaPredicted RBP14.26□□□□□ -0.13
GTF3C1-208ENST00000567843 PNMA2Q9UL42 364 aa14.26□□□□□ -0.13
GTF3C1-208ENST00000567843 U3KPZ7 1027 aaPredicted RBP14.26□□□□□ -0.13
GTF3C1-208ENST00000567843 LAMA4Q16363 1823 aa14.25□□□□□ -0.13
GTF3C1-208ENST00000567843 LAMA2P24043 3122 aaKnown RBP14.25□□□□□ -0.13
GTF3C1-208ENST00000567843 ABCB11O95342 1321 aa14.25□□□□□ -0.13
GTF3C1-208ENST00000567843 UMODL1Q5DID0 1318 aa14.25□□□□□ -0.13
GTF3C1-208ENST00000567843 MROH7Q68CQ1 1323 aa14.25□□□□□ -0.13
GTF3C1-208ENST00000567843 KLRF2D3W0D1 207 aa14.25□□□□□ -0.13
GTF3C1-208ENST00000567843 E7EWF7 191 aa14.25□□□□□ -0.13
GTF3C1-208ENST00000567843 ARIH2O95376 493 aa14.25□□□□□ -0.13
GTF3C1-208ENST00000567843 CFBP00751 764 aa14.25□□□□□ -0.13
GTF3C1-208ENST00000567843 TXNP10599 105 aaKnown RBP14.25□□□□□ -0.13
GTF3C1-208ENST00000567843 CSF2RAP15509 400 aa14.25□□□□□ -0.13
GTF3C1-208ENST00000567843 PPP2R5BQ15173 497 aa14.25□□□□□ -0.13
GTF3C1-208ENST00000567843 SEPT14Q6ZU15 432 aa14.25□□□□□ -0.13
GTF3C1-208ENST00000567843 RALYLQ86SE5 291 aaKnown RBP14.25□□□□□ -0.13
GTF3C1-208ENST00000567843 SLC17A8Q8NDX2 589 aa14.25□□□□□ -0.13
GTF3C1-208ENST00000567843 PIBF1Q8WXW3 757 aa14.25□□□□□ -0.13
GTF3C1-208ENST00000567843 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.25□□□□□ -0.132e-6■■■■□ 21.2
GTF3C1-208ENST00000567843 MAD2L2Q9UI95 211 aa14.25□□□□□ -0.13
GTF3C1-208ENST00000567843 LRRC37A2A6NM11 1700 aa14.24□□□□□ -0.13
GTF3C1-208ENST00000567843 RBM47A0AV96 593 aaKnown RBP14.24□□□□□ -0.13
GTF3C1-208ENST00000567843 PPP1R11O60927 126 aaPredicted RBP14.24□□□□□ -0.13
GTF3C1-208ENST00000567843 CD4P01730 458 aa14.24□□□□□ -0.13
GTF3C1-208ENST00000567843 EIF2AK2P19525 551 aaKnown RBP14.24□□□□□ -0.13
GTF3C1-208ENST00000567843 EDNRBP24530 442 aa14.24□□□□□ -0.13
GTF3C1-208ENST00000567843 NT5C2P49902 561 aa14.24□□□□□ -0.13
GTF3C1-208ENST00000567843 CCL23P55773 120 aa14.24□□□□□ -0.13
GTF3C1-208ENST00000567843 SLC35G1Q2M3R5 365 aa14.24□□□□□ -0.13
GTF3C1-208ENST00000567843 ZNF697Q5TEC3 545 aa14.24□□□□□ -0.13
GTF3C1-208ENST00000567843 MFSD5Q6N075 450 aa14.24□□□□□ -0.13
GTF3C1-208ENST00000567843 C16orf59Q7L2K0 433 aa14.24□□□□□ -0.13
GTF3C1-208ENST00000567843 DNERQ8NFT8 737 aa14.24□□□□□ -0.13
GTF3C1-208ENST00000567843 ZFP91Q96JP5 570 aaPredicted RBP14.24□□□□□ -0.13
GTF3C1-208ENST00000567843 GUCD1Q96NT3 240 aa14.24□□□□□ -0.13
GTF3C1-208ENST00000567843 GPHNQ9NQX3 736 aaPredicted RBP14.24□□□□□ -0.13
GTF3C1-208ENST00000567843 MRPL11Q9Y3B7 192 aaKnown RBP14.24□□□□□ -0.13
GTF3C1-208ENST00000567843 Q9Y3F1 56 aa14.24□□□□□ -0.13
GTF3C1-208ENST00000567843 RBM8AQ9Y5S9 174 aaKnown RBP14.24□□□□□ -0.13
GTF3C1-208ENST00000567843 ERICH2A1L162 156 aa14.23□□□□□ -0.13
GTF3C1-208ENST00000567843 B4GALT4O60513 344 aa14.23□□□□□ -0.13
GTF3C1-208ENST00000567843 CABYRO75952 493 aa14.23□□□□□ -0.13
GTF3C1-208ENST00000567843 ANTXR2P58335 489 aa14.23□□□□□ -0.13
GTF3C1-208ENST00000567843 COL9A3Q14050 684 aaPredicted RBP14.23□□□□□ -0.13
GTF3C1-208ENST00000567843 WTAPQ15007 396 aa14.23□□□□□ -0.13
GTF3C1-208ENST00000567843 FAM47CQ5HY64 1035 aa14.23□□□□□ -0.13
GTF3C1-208ENST00000567843 TMEM67Q5HYA8 995 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms