RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 ITIH3Q06033 890 aa13.57□□□□□ -0.24
CSPG4P13-202ENST00000567704 SMCR8Q8TEV9 937 aaPredicted RBP13.57□□□□□ -0.24
CSPG4P13-202ENST00000567704 CCDC97Q96F63 343 aaPredicted RBP13.57□□□□□ -0.24
CSPG4P13-202ENST00000567704 KLC4Q9NSK0 619 aa13.57□□□□□ -0.24
CSPG4P13-202ENST00000567704 PDE8AO60658 829 aa13.57□□□□□ -0.24
CSPG4P13-202ENST00000567704 ADORA1P30542 326 aa13.57□□□□□ -0.24
CSPG4P13-202ENST00000567704 FAM26FQ5R3K3 315 aa13.57□□□□□ -0.24
CSPG4P13-202ENST00000567704 RESP18Q5W5W9 173 aa13.57□□□□□ -0.24
CSPG4P13-202ENST00000567704 FNBP1Q96RU3 617 aa13.57□□□□□ -0.24
CSPG4P13-202ENST00000567704 VCX3AQ9NNX9 186 aa13.57□□□□□ -0.24
CSPG4P13-202ENST00000567704 ESYT3A0FGR9 886 aa13.56□□□□□ -0.24
CSPG4P13-202ENST00000567704 POC1B-GALNT4F8VUJ3 575 aa13.56□□□□□ -0.24
CSPG4P13-202ENST00000567704 KIF1CO43896 1103 aaKnown RBP13.56□□□□□ -0.24
CSPG4P13-202ENST00000567704 PLCG2P16885 1265 aa13.56□□□□□ -0.24
CSPG4P13-202ENST00000567704 PLA2G4AP47712 749 aa13.56□□□□□ -0.24
CSPG4P13-202ENST00000567704 LLGL1Q15334 1064 aa13.56□□□□□ -0.24
CSPG4P13-202ENST00000567704 LRRC23Q53EV4 343 aaPredicted RBP13.56□□□□□ -0.24
CSPG4P13-202ENST00000567704 MB21D1Q8N884 522 aa13.56□□□□□ -0.24
CSPG4P13-202ENST00000567704 SMC1BQ8NDV3 1235 aa13.56□□□□□ -0.24
CSPG4P13-202ENST00000567704 OSBP2Q969R2 916 aa13.56□□□□□ -0.24
CSPG4P13-202ENST00000567704 PPP1R9AQ9ULJ8 1098 aa13.56□□□□□ -0.24
CSPG4P13-202ENST00000567704 SUFUQ9UMX1 484 aa13.56□□□□□ -0.24
CSPG4P13-202ENST00000567704 PASKQ96RG2 1323 aa13.56□□□□□ -0.24
CSPG4P13-202ENST00000567704 EIF4E1BA6NMX2 242 aaKnown RBP13.56□□□□□ -0.24
CSPG4P13-202ENST00000567704 BIRC2Q13490 618 aa13.56□□□□□ -0.24
CSPG4P13-202ENST00000567704 NBPF9Q3BBW0 867 aa13.56□□□□□ -0.24
CSPG4P13-202ENST00000567704 MUM1L1Q5H9M0 696 aa13.56□□□□□ -0.24
CSPG4P13-202ENST00000567704 RIN2Q8WYP3 895 aaPredicted RBP13.56□□□□□ -0.24
CSPG4P13-202ENST00000567704 SPDL1Q96EA4 605 aa13.56□□□□□ -0.24
CSPG4P13-202ENST00000567704 PUS3Q9BZE2 481 aaKnown RBP13.56□□□□□ -0.24
CSPG4P13-202ENST00000567704 ECM2O94769 699 aaPredicted RBP13.56□□□□□ -0.24
CSPG4P13-202ENST00000567704 LGSNQ5TDP6 509 aa13.56□□□□□ -0.24
CSPG4P13-202ENST00000567704 SH3TC1Q8TE82 1336 aa13.56□□□□□ -0.24
CSPG4P13-202ENST00000567704 MAN2A1Q16706 1144 aa13.56□□□□□ -0.24
CSPG4P13-202ENST00000567704 DCUN1D2Q6PH85 259 aa13.56□□□□□ -0.24
CSPG4P13-202ENST00000567704 NLRP14Q86W24 1093 aa13.56□□□□□ -0.24
CSPG4P13-202ENST00000567704 HVCN1Q96D96 273 aa13.56□□□□□ -0.24
CSPG4P13-202ENST00000567704 FAM167BQ9BTA0 163 aa13.56□□□□□ -0.24
CSPG4P13-202ENST00000567704 PANK4Q9NVE7 773 aa13.56□□□□□ -0.24
CSPG4P13-202ENST00000567704 FAF1Q9UNN5 650 aaPredicted RBP13.56□□□□□ -0.24
CSPG4P13-202ENST00000567704 GMNCA6NCL1 334 aa13.55□□□□□ -0.24
CSPG4P13-202ENST00000567704 LRRC41Q15345 812 aa13.55□□□□□ -0.24
CSPG4P13-202ENST00000567704 NUGGCQ68CJ6 796 aa13.55□□□□□ -0.24
CSPG4P13-202ENST00000567704 NYAP1Q6ZVC0 841 aa13.55□□□□□ -0.24
CSPG4P13-202ENST00000567704 NEK9Q8TD19 979 aa13.55□□□□□ -0.24
CSPG4P13-202ENST00000567704 NT5C3AQ9H0P0 336 aa13.55□□□□□ -0.24
CSPG4P13-202ENST00000567704 CYP2J2P51589 502 aa13.55□□□□□ -0.24
CSPG4P13-202ENST00000567704 ZNF804AQ7Z570 1209 aa13.55□□□□□ -0.24
CSPG4P13-202ENST00000567704 PARP9Q8IXQ6 854 aa13.55□□□□□ -0.24
CSPG4P13-202ENST00000567704 PALM2Q8IXS6 379 aa13.55□□□□□ -0.24
CSPG4P13-202ENST00000567704 PDCD7Q8N8D1 485 aaKnown RBP13.55□□□□□ -0.24
CSPG4P13-202ENST00000567704 RASGRP4Q8TDF6 673 aa13.55□□□□□ -0.24
CSPG4P13-202ENST00000567704 FMO2Q99518 471 aa13.55□□□□□ -0.24
CSPG4P13-202ENST00000567704 ARHGEF35A5YM69 484 aa13.55□□□□□ -0.24
CSPG4P13-202ENST00000567704 EVI5O60447 810 aa13.55□□□□□ -0.24
CSPG4P13-202ENST00000567704 HARSP12081 509 aaKnown RBP13.55□□□□□ -0.24
CSPG4P13-202ENST00000567704 SKIP12755 728 aa13.55□□□□□ -0.24
CSPG4P13-202ENST00000567704 EXOC3L4Q17RC7 722 aa13.55□□□□□ -0.24
CSPG4P13-202ENST00000567704 GDAP1Q8TB36 358 aa13.55□□□□□ -0.24
CSPG4P13-202ENST00000567704 CCHCR1Q8TD31 782 aa13.55□□□□□ -0.24
CSPG4P13-202ENST00000567704 SETDB2Q96T68 719 aa13.55□□□□□ -0.24
CSPG4P13-202ENST00000567704 RNF26Q9BY78 433 aaPredicted RBP13.55□□□□□ -0.24
CSPG4P13-202ENST00000567704 GDAQ9Y2T3 454 aa13.55□□□□□ -0.24
CSPG4P13-202ENST00000567704 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.55□□□□□ -0.24
CSPG4P13-202ENST00000567704 RASGRF2O14827 1237 aa13.55□□□□□ -0.24
CSPG4P13-202ENST00000567704 IFNAR1P17181 557 aa13.55□□□□□ -0.24
CSPG4P13-202ENST00000567704 PDE6BP35913 854 aa13.55□□□□□ -0.24
CSPG4P13-202ENST00000567704 ZNF449Q6P9G9 518 aa13.55□□□□□ -0.24
CSPG4P13-202ENST00000567704 TBK1Q9UHD2 729 aa13.55□□□□□ -0.24
CSPG4P13-202ENST00000567704 TBX22Q9Y458 520 aa13.55□□□□□ -0.24
CSPG4P13-202ENST00000567704 H0Y3Z8 333 aa13.54□□□□□ -0.24
CSPG4P13-202ENST00000567704 NDC80O14777 642 aa13.54□□□□□ -0.24
CSPG4P13-202ENST00000567704 ATF2P15336 505 aa13.54□□□□□ -0.24
CSPG4P13-202ENST00000567704 GUCY1A3Q02108 690 aa13.54□□□□□ -0.24
CSPG4P13-202ENST00000567704 MESDQ14696 234 aa13.54□□□□□ -0.24
CSPG4P13-202ENST00000567704 FAM133AQ8N9E0 248 aa13.54□□□□□ -0.24
CSPG4P13-202ENST00000567704 FBXO41Q8TF61 875 aa13.54□□□□□ -0.24
CSPG4P13-202ENST00000567704 POLD4Q9HCU8 107 aa13.54□□□□□ -0.24
CSPG4P13-202ENST00000567704 MEFVO15553 781 aaPredicted RBP13.54□□□□□ -0.24
CSPG4P13-202ENST00000567704 MMEP08473 750 aa13.54□□□□□ -0.24
CSPG4P13-202ENST00000567704 BEND6Q5SZJ8 279 aaPredicted RBP13.54□□□□□ -0.24
CSPG4P13-202ENST00000567704 OTUD6AQ7L8S5 288 aa13.54□□□□□ -0.24
CSPG4P13-202ENST00000567704 NEK8Q86SG6 692 aa13.54□□□□□ -0.24
CSPG4P13-202ENST00000567704 MSANTD4Q8NCY6 345 aa13.54□□□□□ -0.24
CSPG4P13-202ENST00000567704 RIC8AQ9NPQ8 531 aa13.54□□□□□ -0.24
CSPG4P13-202ENST00000567704 TXLNGQ9NUQ3 528 aa13.54□□□□□ -0.24
CSPG4P13-202ENST00000567704 TYW1Q9NV66 732 aaKnown RBP13.54□□□□□ -0.24
CSPG4P13-202ENST00000567704 CCNE1P24864 410 aa13.54□□□□□ -0.24
CSPG4P13-202ENST00000567704 KCNJ6P48051 423 aa13.54□□□□□ -0.24
CSPG4P13-202ENST00000567704 IRX4P78413 519 aa13.54□□□□□ -0.24
CSPG4P13-202ENST00000567704 GNPTABQ3T906 1256 aa13.54□□□□□ -0.24
CSPG4P13-202ENST00000567704 TMCO4Q5TGY1 634 aa13.54□□□□□ -0.24
CSPG4P13-202ENST00000567704 WDR78Q5VTH9 848 aa13.54□□□□□ -0.24
CSPG4P13-202ENST00000567704 CCDC89Q8N998 374 aa13.54□□□□□ -0.24
CSPG4P13-202ENST00000567704 ARMC2Q8NEN0 867 aa13.54□□□□□ -0.24
CSPG4P13-202ENST00000567704 LZTS2Q9BRK4 669 aa13.54□□□□□ -0.24
CSPG4P13-202ENST00000567704 SH2B2O14492 632 aaPredicted RBP13.53□□□□□ -0.24
CSPG4P13-202ENST00000567704 HIBADHP31937 336 aaKnown RBP13.53□□□□□ -0.24
CSPG4P13-202ENST00000567704 SP4Q02446 784 aa13.53□□□□□ -0.24
CSPG4P13-202ENST00000567704 ABTB1Q969K4 478 aaPredicted RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms