RNA–Protein interactions for RNA: ENST00000567406.5

CDR2-206, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-206ENST00000567406 TLR3O15455 904 aaKnown RBP17.95■□□□□ 0.46
CDR2-206ENST00000567406 USH1GQ495M9 461 aa17.95■□□□□ 0.46
CDR2-206ENST00000567406 ZNF365Q70YC5 407 aa17.95■□□□□ 0.46
CDR2-206ENST00000567406 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.95■□□□□ 0.46
CDR2-206ENST00000567406 SLC43A3Q8NBI5 491 aa17.95■□□□□ 0.46
CDR2-206ENST00000567406 MORC4Q8TE76 937 aa17.95■□□□□ 0.46
CDR2-206ENST00000567406 TTC14Q96N46 770 aa17.95■□□□□ 0.46
CDR2-206ENST00000567406 WDR11Q9BZH6 1224 aa17.95■□□□□ 0.46
CDR2-206ENST00000567406 VTA1Q9NP79 307 aa17.95■□□□□ 0.46
CDR2-206ENST00000567406 DIAPH3Q9NSV4 1193 aa17.95■□□□□ 0.46
CDR2-206ENST00000567406 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.94■□□□□ 0.46
CDR2-206ENST00000567406 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.94■□□□□ 0.46
CDR2-206ENST00000567406 B4E1Z4 1266 aa17.94■□□□□ 0.46
CDR2-206ENST00000567406 KDM4AO75164 1064 aa17.94■□□□□ 0.46
CDR2-206ENST00000567406 SNHG28P0DPA3 235 aa17.94■□□□□ 0.46
CDR2-206ENST00000567406 PBX2P40425 430 aa17.94■□□□□ 0.46
CDR2-206ENST00000567406 CCL23P55773 120 aa17.94■□□□□ 0.46
CDR2-206ENST00000567406 PPIGQ13427 754 aaKnown RBP eCLIP17.94■□□□□ 0.463e-10■□□□□ 9.3
CDR2-206ENST00000567406 GRIN2CQ14957 1233 aa17.94■□□□□ 0.46
CDR2-206ENST00000567406 RNF207Q6ZRF8 634 aa17.94■□□□□ 0.46
CDR2-206ENST00000567406 TMEM199Q8N511 208 aa17.94■□□□□ 0.46
CDR2-206ENST00000567406 MAFAQ8NHW3 353 aaPredicted RBP17.94■□□□□ 0.46
CDR2-206ENST00000567406 ESR2Q92731 530 aa17.94■□□□□ 0.46
CDR2-206ENST00000567406 OSBPL3Q9H4L5 887 aa17.94■□□□□ 0.46
CDR2-206ENST00000567406 RNF41Q9H4P4 317 aaPredicted RBP17.94■□□□□ 0.46
CDR2-206ENST00000567406 ZEB2O60315 1214 aa17.93■□□□□ 0.46
CDR2-206ENST00000567406 B4GALT4O60513 344 aa17.93■□□□□ 0.46
CDR2-206ENST00000567406 DNAJB2P25686 324 aa17.93■□□□□ 0.46
CDR2-206ENST00000567406 MFAP1P55081 439 aaKnown RBP17.93■□□□□ 0.46
CDR2-206ENST00000567406 RPS6P62753 249 aaKnown RBP17.93■□□□□ 0.46
CDR2-206ENST00000567406 DUSP28Q4G0W2 176 aa17.93■□□□□ 0.46
CDR2-206ENST00000567406 TICAM2Q86XR7 235 aa17.93■□□□□ 0.46
CDR2-206ENST00000567406 TBC1D5Q92609 795 aa17.93■□□□□ 0.46
CDR2-206ENST00000567406 COPS5Q92905 334 aa17.93■□□□□ 0.46
CDR2-206ENST00000567406 IL25Q9H293 177 aa17.93■□□□□ 0.46
CDR2-206ENST00000567406 HIPK3Q9H422 1215 aa17.93■□□□□ 0.46
CDR2-206ENST00000567406 ADD3Q9UEY8 706 aaKnown RBP17.93■□□□□ 0.46
CDR2-206ENST00000567406 CABYRO75952 493 aa17.92■□□□□ 0.46
CDR2-206ENST00000567406 MYL3P08590 195 aa17.92■□□□□ 0.46
CDR2-206ENST00000567406 FOSL2P15408 326 aa17.92■□□□□ 0.46
CDR2-206ENST00000567406 PNMA1Q8ND90 353 aa17.92■□□□□ 0.46
CDR2-206ENST00000567406 Q9Y3F1 56 aa17.92■□□□□ 0.46
CDR2-206ENST00000567406 PCP11498 1178 aaKnown RBP17.91■□□□□ 0.46
CDR2-206ENST00000567406 PDE4DQ08499 809 aa17.91■□□□□ 0.46
CDR2-206ENST00000567406 AAMPQ13685 434 aa17.91■□□□□ 0.46
CDR2-206ENST00000567406 DGKHQ86XP1 1220 aa17.91■□□□□ 0.46
CDR2-206ENST00000567406 OR6J1Q8NGC5 347 aa17.91■□□□□ 0.46
CDR2-206ENST00000567406 TIFAQ96CG3 184 aa17.91■□□□□ 0.46
CDR2-206ENST00000567406 COL25A1Q9BXS0 654 aaPredicted RBP17.91■□□□□ 0.46
CDR2-206ENST00000567406 PBX4Q9BYU1 374 aa17.91■□□□□ 0.46
CDR2-206ENST00000567406 VAT1LQ9HCJ6 419 aa17.91■□□□□ 0.46
CDR2-206ENST00000567406 TRMT13Q9NUP7 481 aaKnown RBP17.91■□□□□ 0.46
CDR2-206ENST00000567406 CXXC1Q9P0U4 656 aaPredicted RBP17.91■□□□□ 0.46
CDR2-206ENST00000567406 ZSWIM5Q9P217 1185 aa17.91■□□□□ 0.46
CDR2-206ENST00000567406 MYO9BQ13459 2157 aa17.9■□□□□ 0.46
CDR2-206ENST00000567406 RBM47A0AV96 593 aaKnown RBP17.9■□□□□ 0.46
CDR2-206ENST00000567406 CYP2C9P11712 490 aa17.9■□□□□ 0.46
CDR2-206ENST00000567406 CDC37Q16543 378 aaPredicted RBP17.9■□□□□ 0.46
CDR2-206ENST00000567406 OTOP2Q7RTS6 562 aa17.9■□□□□ 0.46
CDR2-206ENST00000567406 ADGRF4Q8IZF3 695 aa17.9■□□□□ 0.46
CDR2-206ENST00000567406 ENAHQ8N8S7 591 aaPredicted RBP17.9■□□□□ 0.46
CDR2-206ENST00000567406 SCLYQ96I15 445 aa17.9■□□□□ 0.46
CDR2-206ENST00000567406 ZSCAN10Q96SZ4 725 aaPredicted RBP17.9■□□□□ 0.46
CDR2-206ENST00000567406 NOC4LQ9BVI4 516 aaKnown RBP17.9■□□□□ 0.46
CDR2-206ENST00000567406 WNT8AQ9H1J5 351 aa17.9■□□□□ 0.46
CDR2-206ENST00000567406 ZNF576Q9H609 170 aa17.9■□□□□ 0.46
CDR2-206ENST00000567406 KAT14Q9H8E8 782 aa17.9■□□□□ 0.46
CDR2-206ENST00000567406 IL23AQ9NPF7 189 aa17.9■□□□□ 0.46
CDR2-206ENST00000567406 RBAK-RBAKDNI3L0D1 243 aa17.89■□□□□ 0.45
CDR2-206ENST00000567406 ARIH2O95376 493 aa17.89■□□□□ 0.45
CDR2-206ENST00000567406 PDE4AP27815 886 aa17.89■□□□□ 0.45
CDR2-206ENST00000567406 PURAQ00577 322 aaKnown RBP17.89■□□□□ 0.45
CDR2-206ENST00000567406 GPATCH4Q5T3I0 446 aaKnown RBP17.89■□□□□ 0.45
CDR2-206ENST00000567406 RASIP1Q5U651 963 aa17.89■□□□□ 0.45
CDR2-206ENST00000567406 IQCA1Q86XH1 822 aa17.89■□□□□ 0.45
CDR2-206ENST00000567406 ALDH8A1Q9H2A2 487 aaPredicted RBP17.89■□□□□ 0.45
CDR2-206ENST00000567406 WDR19Q8NEZ3 1342 aa17.89■□□□□ 0.45
CDR2-206ENST00000567406 CHD9Q3L8U1 2897 aa17.88■□□□□ 0.45
CDR2-206ENST00000567406 FGBP02675 491 aa17.88■□□□□ 0.45
CDR2-206ENST00000567406 EDNRBP24530 442 aa17.88■□□□□ 0.45
CDR2-206ENST00000567406 CHMP4BP1P59074 171 aa17.88■□□□□ 0.45
CDR2-206ENST00000567406 IMMTQ16891 758 aaKnown RBP17.88■□□□□ 0.45
CDR2-206ENST00000567406 PSRC1Q6PGN9 363 aaPredicted RBP17.88■□□□□ 0.45
CDR2-206ENST00000567406 TAAR1Q96RJ0 339 aa17.88■□□□□ 0.45
CDR2-206ENST00000567406 DSCC1Q9BVC3 393 aa17.88■□□□□ 0.45
CDR2-206ENST00000567406 COL20A1Q9P218 1284 aa17.88■□□□□ 0.45
CDR2-206ENST00000567406 SUPT16HQ9Y5B9 1047 aaKnown RBP17.88■□□□□ 0.45
CDR2-206ENST00000567406 TNKSO95271 1327 aa17.88■□□□□ 0.45
CDR2-206ENST00000567406 LAMA4Q16363 1823 aa17.88■□□□□ 0.45
CDR2-206ENST00000567406 SPTBN5Q9NRC6 3674 aaKnown RBP17.87■□□□□ 0.45
CDR2-206ENST00000567406 HIP1O00291 1037 aa17.87■□□□□ 0.45
CDR2-206ENST00000567406 DHX16O60231 1041 aaKnown RBP17.87■□□□□ 0.45
CDR2-206ENST00000567406 TXNP10599 105 aaKnown RBP17.87■□□□□ 0.45
CDR2-206ENST00000567406 GSPT1P15170 499 aaKnown RBP17.87■□□□□ 0.45
CDR2-206ENST00000567406 IRX6P78412 446 aaPredicted RBP17.87■□□□□ 0.45
CDR2-206ENST00000567406 PPP2R5BQ15173 497 aa17.87■□□□□ 0.45
CDR2-206ENST00000567406 QRICH1Q2TAL8 776 aa17.87■□□□□ 0.45
CDR2-206ENST00000567406 NBPF20Q3BBV1 942 aa17.87■□□□□ 0.45
CDR2-206ENST00000567406 FAM47CQ5HY64 1035 aa17.87■□□□□ 0.45
CDR2-206ENST00000567406 USP38Q8NB14 1042 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms