RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 MFSD14CQ5VZR4 134 aa14.04□□□□□ -0.16
SF3B3-208ENST00000567250 HEATR3Q7Z4Q2 680 aa14.04□□□□□ -0.16
SF3B3-208ENST00000567250 ZNF467Q7Z7K2 595 aaPredicted RBP14.04□□□□□ -0.16
SF3B3-208ENST00000567250 TEX2Q8IWB9 1127 aa14.04□□□□□ -0.16
SF3B3-208ENST00000567250 MSL3Q8N5Y2 521 aaKnown RBP14.04□□□□□ -0.16
SF3B3-208ENST00000567250 CLEC4DQ8WXI8 215 aa14.04□□□□□ -0.16
SF3B3-208ENST00000567250 TRIB2Q92519 343 aa14.04□□□□□ -0.16
SF3B3-208ENST00000567250 MAML3Q96JK9 1138 aa14.04□□□□□ -0.16
SF3B3-208ENST00000567250 LARP6Q9BRS8 491 aaKnown RBP14.04□□□□□ -0.16
SF3B3-208ENST00000567250 SH2B1Q9NRF2 756 aaPredicted RBP14.04□□□□□ -0.16
SF3B3-208ENST00000567250 MCM3APO60318 1980 aa14.03□□□□□ -0.16
SF3B3-208ENST00000567250 B4DLN1 442 aa14.03□□□□□ -0.16
SF3B3-208ENST00000567250 PRPF3O43395 683 aaKnown RBP14.03□□□□□ -0.16
SF3B3-208ENST00000567250 COBLO75128 1261 aa14.03□□□□□ -0.16
SF3B3-208ENST00000567250 DEXIO95424 95 aa14.03□□□□□ -0.16
SF3B3-208ENST00000567250 PGK2P07205 417 aa14.03□□□□□ -0.16
SF3B3-208ENST00000567250 ELNP15502 786 aa14.03□□□□□ -0.16
SF3B3-208ENST00000567250 TAL1P17542 331 aaPredicted RBP14.03□□□□□ -0.16
SF3B3-208ENST00000567250 MRPL12P52815 198 aaKnown RBP14.03□□□□□ -0.16
SF3B3-208ENST00000567250 RPS6P62753 249 aaKnown RBP14.03□□□□□ -0.16
SF3B3-208ENST00000567250 GHRHRQ02643 423 aa14.03□□□□□ -0.16
SF3B3-208ENST00000567250 SSRP1Q08945 709 aaKnown RBP14.03□□□□□ -0.16
SF3B3-208ENST00000567250 SCRN1Q12765 414 aa14.03□□□□□ -0.16
SF3B3-208ENST00000567250 MKRN4PQ13434 485 aaPredicted RBP14.03□□□□□ -0.16
SF3B3-208ENST00000567250 NTRK3Q16288 839 aa14.03□□□□□ -0.16
SF3B3-208ENST00000567250 ME3Q16798 604 aa14.03□□□□□ -0.16
SF3B3-208ENST00000567250 SLC30A10Q6XR72 485 aa14.03□□□□□ -0.16
SF3B3-208ENST00000567250 CCDC148Q8NFR7 591 aa14.03□□□□□ -0.16
SF3B3-208ENST00000567250 CUL5Q93034 780 aa14.03□□□□□ -0.16
SF3B3-208ENST00000567250 ARMC5Q96C12 935 aa14.03□□□□□ -0.16
SF3B3-208ENST00000567250 SLC26A6Q9BXS9 759 aa14.03□□□□□ -0.16
SF3B3-208ENST00000567250 GLT8D2Q9H1C3 349 aa14.03□□□□□ -0.16
SF3B3-208ENST00000567250 STK36Q9NRP7 1315 aa14.03□□□□□ -0.16
SF3B3-208ENST00000567250 SYNGAP1Q96PV0 1343 aa14.02□□□□□ -0.17
SF3B3-208ENST00000567250 ASB14A6NK59 587 aa14.02□□□□□ -0.17
SF3B3-208ENST00000567250 GCOM1H8Y6P7 765 aaPredicted RBP14.02□□□□□ -0.17
SF3B3-208ENST00000567250 CFBP00751 764 aa14.02□□□□□ -0.17
SF3B3-208ENST00000567250 INHAP05111 366 aa14.02□□□□□ -0.17
SF3B3-208ENST00000567250 POLR2MP0CAP2 368 aa14.02□□□□□ -0.17
SF3B3-208ENST00000567250 SCG2P13521 617 aa14.02□□□□□ -0.17
SF3B3-208ENST00000567250 CALML3P27482 149 aa14.02□□□□□ -0.17
SF3B3-208ENST00000567250 NAPAP54920 295 aa14.02□□□□□ -0.17
SF3B3-208ENST00000567250 BAATQ14032 418 aaPredicted RBP14.02□□□□□ -0.17
SF3B3-208ENST00000567250 PFKFB3Q16875 520 aaPredicted RBP14.02□□□□□ -0.17
SF3B3-208ENST00000567250 WWC2Q6AWC2 1192 aa14.02□□□□□ -0.17
SF3B3-208ENST00000567250 FAM177A1Q8N128 213 aaPredicted RBP14.02□□□□□ -0.17
SF3B3-208ENST00000567250 FAM133AQ8N9E0 248 aa14.02□□□□□ -0.17
SF3B3-208ENST00000567250 DNERQ8NFT8 737 aa14.02□□□□□ -0.17
SF3B3-208ENST00000567250 NPLOC4Q8TAT6 608 aa14.02□□□□□ -0.17
SF3B3-208ENST00000567250 SH3TC2Q8TF17 1288 aa14.02□□□□□ -0.17
SF3B3-208ENST00000567250 WASF1Q92558 559 aa14.02□□□□□ -0.17
SF3B3-208ENST00000567250 PHKBQ93100 1093 aa14.02□□□□□ -0.17
SF3B3-208ENST00000567250 BARHL2Q9NY43 387 aa14.02□□□□□ -0.17
SF3B3-208ENST00000567250 V9GY48 417 aaPredicted RBP14.02□□□□□ -0.17
SF3B3-208ENST00000567250 hCG_1642624A0A1W2PR95 340 aa14.01□□□□□ -0.17
SF3B3-208ENST00000567250 HSD17B4P51659 736 aa14.01□□□□□ -0.17
SF3B3-208ENST00000567250 CCL14Q16627 93 aa14.01□□□□□ -0.17
SF3B3-208ENST00000567250 GPKOWQ92917 476 aaPredicted RBP eCLIP14.01□□□□□ -0.172e-6■■■■□ 20.2
SF3B3-208ENST00000567250 ZNF333Q96JL9 665 aa14.01□□□□□ -0.17
SF3B3-208ENST00000567250 TINF2Q9BSI4 451 aa14.01□□□□□ -0.17
SF3B3-208ENST00000567250 NRBP1Q9UHY1 535 aa14.01□□□□□ -0.17
SF3B3-208ENST00000567250 CNPY2Q9Y2B0 182 aa14.01□□□□□ -0.17
SF3B3-208ENST00000567250 CENPFP49454 3210 aa14□□□□□ -0.17
SF3B3-208ENST00000567250 KIAA1217Q5T5P2 1943 aa14□□□□□ -0.17
SF3B3-208ENST00000567250 PIK3CDO00329 1044 aa14□□□□□ -0.17
SF3B3-208ENST00000567250 LARGE1O95461 756 aa14□□□□□ -0.17
SF3B3-208ENST00000567250 PRKAR2AP13861 404 aaKnown RBP14□□□□□ -0.17
SF3B3-208ENST00000567250 XBP1P17861 261 aa14□□□□□ -0.17
SF3B3-208ENST00000567250 ALDH5A1P51649 535 aaPredicted RBP14□□□□□ -0.17
SF3B3-208ENST00000567250 MAMDC4Q6UXC1 1216 aa14□□□□□ -0.17
SF3B3-208ENST00000567250 SMARCC2Q8TAQ2 1214 aa14□□□□□ -0.17
SF3B3-208ENST00000567250 ABHD8Q96I13 439 aa14□□□□□ -0.17
SF3B3-208ENST00000567250 SH3GLB2Q9NR46 395 aa14□□□□□ -0.17
SF3B3-208ENST00000567250 RPTORQ8N122 1335 aa13.99□□□□□ -0.17
SF3B3-208ENST00000567250 ESYT2A0FGR8 921 aa13.99□□□□□ -0.17
SF3B3-208ENST00000567250 STXBP3O00186 592 aa13.99□□□□□ -0.17
SF3B3-208ENST00000567250 OPLAHO14841 1288 aa13.99□□□□□ -0.17
SF3B3-208ENST00000567250 GNA11P29992 359 aa13.99□□□□□ -0.17
SF3B3-208ENST00000567250 ADCY7P51828 1080 aa13.99□□□□□ -0.17
SF3B3-208ENST00000567250 CNTN2Q02246 1040 aa13.99□□□□□ -0.17
SF3B3-208ENST00000567250 MAP3K21Q5TCX8 1036 aa13.99□□□□□ -0.17
SF3B3-208ENST00000567250 ARMCX2Q7L311 632 aa13.99□□□□□ -0.17
SF3B3-208ENST00000567250 NECAB1Q8N987 351 aa13.99□□□□□ -0.17
SF3B3-208ENST00000567250 SYTL5Q8TDW5 730 aaPredicted RBP13.99□□□□□ -0.17
SF3B3-208ENST00000567250 NSUN6Q8TEA1 469 aaKnown RBP13.99□□□□□ -0.17
SF3B3-208ENST00000567250 LLPHQ9BRT6 129 aaKnown RBP13.99□□□□□ -0.17
SF3B3-208ENST00000567250 PSTPIP2Q9H939 334 aa13.99□□□□□ -0.17
SF3B3-208ENST00000567250 EHMT1Q9H9B1 1298 aa13.99□□□□□ -0.17
SF3B3-208ENST00000567250 C6orf50Q9HD87 102 aa13.99□□□□□ -0.17
SF3B3-208ENST00000567250 HMX1Q9NP08 348 aaPredicted RBP13.99□□□□□ -0.17
SF3B3-208ENST00000567250 FLRT1Q9NZU1 646 aa13.99□□□□□ -0.17
SF3B3-208ENST00000567250 SOWAHBA6NEL2 793 aa13.98□□□□□ -0.17
SF3B3-208ENST00000567250 SPDYE3A6NKU9 549 aa13.98□□□□□ -0.17
SF3B3-208ENST00000567250 MSCO60682 206 aa13.98□□□□□ -0.17
SF3B3-208ENST00000567250 CYP2C19P33261 490 aa13.98□□□□□ -0.17
SF3B3-208ENST00000567250 HMGN5P82970 282 aaKnown RBP13.98□□□□□ -0.17
SF3B3-208ENST00000567250 PKN1Q16512 942 aa13.98□□□□□ -0.17
SF3B3-208ENST00000567250 ARHGEF16Q5VV41 709 aa13.98□□□□□ -0.17
SF3B3-208ENST00000567250 MCTP2Q6DN12 878 aa13.98□□□□□ -0.17
SF3B3-208ENST00000567250 CCDC83Q8IWF9 413 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms