RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 RIOX1Q9H6W3 641 aa15.56■□□□□ 0.08
CLK3-218ENST00000566926 SENP2Q9HC62 589 aa15.56■□□□□ 0.08
CLK3-218ENST00000566926 XPNPEP3Q9NQH7 507 aa15.56■□□□□ 0.08
CLK3-218ENST00000566926 TAL1P17542 331 aaPredicted RBP15.55■□□□□ 0.08
CLK3-218ENST00000566926 CALML3P27482 149 aa15.55■□□□□ 0.08
CLK3-218ENST00000566926 SMARCA1P28370 1054 aa15.55■□□□□ 0.08
CLK3-218ENST00000566926 RPS6P62753 249 aaKnown RBP15.55■□□□□ 0.08
CLK3-218ENST00000566926 ANO1Q5XXA6 986 aa15.55■□□□□ 0.08
CLK3-218ENST00000566926 SAMD3Q8N6K7 520 aa15.55■□□□□ 0.08
CLK3-218ENST00000566926 DNERQ8NFT8 737 aa15.55■□□□□ 0.08
CLK3-218ENST00000566926 MTMR8Q96EF0 704 aa15.55■□□□□ 0.08
CLK3-218ENST00000566926 SPC25Q9HBM1 224 aa15.55■□□□□ 0.08
CLK3-218ENST00000566926 MAP3K20Q9NYL2 800 aaKnown RBP15.55■□□□□ 0.08
CLK3-218ENST00000566926 SLC12A7Q9Y666 1083 aa15.55■□□□□ 0.08
CLK3-218ENST00000566926 CYP46A1Q9Y6A2 500 aa15.55■□□□□ 0.08
CLK3-218ENST00000566926 DUSP11O75319 330 aaKnown RBP15.54■□□□□ 0.08
CLK3-218ENST00000566926 COL6A1P12109 1028 aa15.54■□□□□ 0.08
CLK3-218ENST00000566926 ALDH5A1P51649 535 aaPredicted RBP15.54■□□□□ 0.08
CLK3-218ENST00000566926 NEK4P51957 841 aa15.54■□□□□ 0.08
CLK3-218ENST00000566926 SGMS1Q86VZ5 419 aa15.54■□□□□ 0.08
CLK3-218ENST00000566926 RASEFQ8IZ41 740 aa15.54■□□□□ 0.08
CLK3-218ENST00000566926 MORC4Q8TE76 937 aa15.54■□□□□ 0.08
CLK3-218ENST00000566926 ZSWIM6Q9HCJ5 1215 aa15.54■□□□□ 0.08
CLK3-218ENST00000566926 VTA1Q9NP79 307 aa15.54■□□□□ 0.08
CLK3-218ENST00000566926 KIAA1217Q5T5P2 1943 aa15.54■□□□□ 0.08
CLK3-218ENST00000566926 LRRC37A2A6NM11 1700 aa15.54■□□□□ 0.08
CLK3-218ENST00000566926 PNMA6FA0A0J9YX94 578 aa15.53■□□□□ 0.08
CLK3-218ENST00000566926 MYCNP04198 464 aaPredicted RBP15.53■□□□□ 0.08
CLK3-218ENST00000566926 FGD1P98174 961 aa15.53■□□□□ 0.08
CLK3-218ENST00000566926 EXOSC10Q01780 885 aaKnown RBP15.53■□□□□ 0.08
CLK3-218ENST00000566926 ANKRD1Q15327 319 aa15.53■□□□□ 0.08
CLK3-218ENST00000566926 LRRC41Q15345 812 aa15.53■□□□□ 0.08
CLK3-218ENST00000566926 CCDC144BQ3MJ40 725 aa15.53■□□□□ 0.08
CLK3-218ENST00000566926 GJC2Q5T442 439 aaPredicted RBP15.53■□□□□ 0.08
CLK3-218ENST00000566926 BLOC1S2Q6QNY1 142 aa15.53■□□□□ 0.08
CLK3-218ENST00000566926 SLC30A10Q6XR72 485 aa15.53■□□□□ 0.08
CLK3-218ENST00000566926 HOMER1Q86YM7 354 aa15.53■□□□□ 0.08
CLK3-218ENST00000566926 JAKMIP1Q96N16 626 aaKnown RBP15.53■□□□□ 0.08
CLK3-218ENST00000566926 SPZ1Q9BXG8 430 aa15.53■□□□□ 0.08
CLK3-218ENST00000566926 SENP6Q9GZR1 1112 aaPredicted RBP15.53■□□□□ 0.08
CLK3-218ENST00000566926 PCDHA1Q9Y5I3 950 aa15.53■□□□□ 0.08
CLK3-218ENST00000566926 CASTP20810 708 aaKnown RBP15.52■□□□□ 0.08
CLK3-218ENST00000566926 TNFAIP2Q03169 654 aa15.52■□□□□ 0.08
CLK3-218ENST00000566926 ADCK5Q3MIX3 580 aa15.52■□□□□ 0.08
CLK3-218ENST00000566926 IQSEC1Q6DN90 963 aa15.52■□□□□ 0.08
CLK3-218ENST00000566926 RUFY3Q7L099 469 aa15.52■□□□□ 0.08
CLK3-218ENST00000566926 RRP36Q96EU6 259 aaKnown RBP15.52■□□□□ 0.08
CLK3-218ENST00000566926 PIGSQ96S52 555 aa15.52■□□□□ 0.08
CLK3-218ENST00000566926 TSEN34Q9BSV6 310 aaKnown RBP15.52■□□□□ 0.08
CLK3-218ENST00000566926 LRRC2Q9BYS8 371 aa15.52■□□□□ 0.08
CLK3-218ENST00000566926 KATNBL1Q9H079 304 aa15.52■□□□□ 0.08
CLK3-218ENST00000566926 ALDH8A1Q9H2A2 487 aaPredicted RBP15.52■□□□□ 0.08
CLK3-218ENST00000566926 GPHNQ9NQX3 736 aaPredicted RBP15.52■□□□□ 0.08
CLK3-218ENST00000566926 SEC63Q9UGP8 760 aaKnown RBP15.52■□□□□ 0.08
CLK3-218ENST00000566926 ASTN1O14525 1302 aa15.51■□□□□ 0.07
CLK3-218ENST00000566926 K7ELQ4 463 aaPredicted RBP15.51■□□□□ 0.07
CLK3-218ENST00000566926 CYTH3O43739 400 aa15.51■□□□□ 0.07
CLK3-218ENST00000566926 PGK1P00558 417 aa15.51■□□□□ 0.07
CLK3-218ENST00000566926 CFBP00751 764 aa15.51■□□□□ 0.07
CLK3-218ENST00000566926 PDE4DQ08499 809 aa15.51■□□□□ 0.07
CLK3-218ENST00000566926 NOL8Q76FK4 1167 aaKnown RBP15.51■□□□□ 0.07
CLK3-218ENST00000566926 FANCBQ8NB91 859 aa15.51■□□□□ 0.07
CLK3-218ENST00000566926 PCSK9Q8NBP7 692 aaKnown RBP15.51■□□□□ 0.07
CLK3-218ENST00000566926 NSUN6Q8TEA1 469 aaKnown RBP15.51■□□□□ 0.07
CLK3-218ENST00000566926 MYL10Q9BUA6 226 aa15.51■□□□□ 0.07
CLK3-218ENST00000566926 RBM28Q9NW13 759 aaKnown RBP15.51■□□□□ 0.07
CLK3-218ENST00000566926 SYNRGQ9UMZ2 1314 aa15.5■□□□□ 0.07
CLK3-218ENST00000566926 MOXD2PA6NHM9 499 aa15.5■□□□□ 0.07
CLK3-218ENST00000566926 ADAMTS4O75173 837 aa15.5■□□□□ 0.07
CLK3-218ENST00000566926 RCAN1P53805 252 aa15.5■□□□□ 0.07
CLK3-218ENST00000566926 GHRHRQ02643 423 aa15.5■□□□□ 0.07
CLK3-218ENST00000566926 PPP2R5BQ15173 497 aa15.5■□□□□ 0.07
CLK3-218ENST00000566926 APOA5Q6Q788 366 aa15.5■□□□□ 0.07
CLK3-218ENST00000566926 EEPD1Q7L9B9 569 aa15.5■□□□□ 0.07
CLK3-218ENST00000566926 SYTL5Q8TDW5 730 aaPredicted RBP15.5■□□□□ 0.07
CLK3-218ENST00000566926 PURBQ96QR8 312 aaKnown RBP15.5■□□□□ 0.07
CLK3-218ENST00000566926 IWS1Q96ST2 819 aa15.5■□□□□ 0.07
CLK3-218ENST00000566926 AP5M1Q9H0R1 490 aa15.5■□□□□ 0.07
CLK3-218ENST00000566926 PHF24Q9UPV7 400 aa15.5■□□□□ 0.07
CLK3-218ENST00000566926 Q9Y3F1 56 aa15.5■□□□□ 0.07
CLK3-218ENST00000566926 MYH7BA7E2Y1 1941 aa15.5■□□□□ 0.07
CLK3-218ENST00000566926 H0YGN5 161 aa15.49■□□□□ 0.07
CLK3-218ENST00000566926 ZBTB43O43298 467 aa15.49■□□□□ 0.07
CLK3-218ENST00000566926 C6orf222P0C671 652 aaPredicted RBP15.49■□□□□ 0.07
CLK3-218ENST00000566926 RPS6KB1P23443 525 aa15.49■□□□□ 0.07
CLK3-218ENST00000566926 EDNRBP24530 442 aa15.49■□□□□ 0.07
CLK3-218ENST00000566926 CST5P28325 142 aaPredicted RBP15.49■□□□□ 0.07
CLK3-218ENST00000566926 ADCYAP1R1P41586 468 aa15.49■□□□□ 0.07
CLK3-218ENST00000566926 HSD17B4P51659 736 aa15.49■□□□□ 0.07
CLK3-218ENST00000566926 GJA9P57773 515 aa15.49■□□□□ 0.07
CLK3-218ENST00000566926 TAPT1Q6NXT6 567 aa15.49■□□□□ 0.07
CLK3-218ENST00000566926 MICU3Q86XE3 530 aa15.49■□□□□ 0.07
CLK3-218ENST00000566926 FBXO16Q8IX29 292 aaPredicted RBP15.49■□□□□ 0.07
CLK3-218ENST00000566926 FBXL16Q8N461 479 aa15.49■□□□□ 0.07
CLK3-218ENST00000566926 KLHDC9Q8NEP7 349 aa15.49■□□□□ 0.07
CLK3-218ENST00000566926 TBC1D5Q92609 795 aa15.49■□□□□ 0.07
CLK3-218ENST00000566926 RMDN3Q96TC7 470 aa15.49■□□□□ 0.07
CLK3-218ENST00000566926 UPF3BQ9BZI7 483 aaKnown RBP15.49■□□□□ 0.07
CLK3-218ENST00000566926 UPF3AQ9H1J1 476 aaKnown RBP15.49■□□□□ 0.07
CLK3-218ENST00000566926 PDRG1Q9NUG6 133 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms