RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 ITGA7Q13683 1181 aa32.45■■■□□ 2.79
UBFD1-206ENST00000566669 BRDTQ58F21 947 aaPredicted RBP32.45■■■□□ 2.79
UBFD1-206ENST00000566669 PSRC1Q6PGN9 363 aaPredicted RBP32.45■■■□□ 2.79
UBFD1-206ENST00000566669 CWC27Q6UX04 472 aaKnown RBP32.45■■■□□ 2.79
UBFD1-206ENST00000566669 CXCL17Q6UXB2 119 aa32.45■■■□□ 2.79
UBFD1-206ENST00000566669 NKRFO15226 690 aaKnown RBP eCLIP32.44■■■□□ 2.78
UBFD1-206ENST00000566669 IMMTQ16891 758 aaKnown RBP32.44■■■□□ 2.78
UBFD1-206ENST00000566669 EEPD1Q7L9B9 569 aa32.44■■■□□ 2.78
UBFD1-206ENST00000566669 ANKS1AQ92625 1134 aa32.44■■■□□ 2.78
UBFD1-206ENST00000566669 YTHDC1Q96MU7 727 aaKnown RBP32.44■■■□□ 2.78
UBFD1-206ENST00000566669 CDX2Q99626 313 aaPredicted RBP32.44■■■□□ 2.78
UBFD1-206ENST00000566669 POLR3EQ9NVU0 708 aa32.44■■■□□ 2.78
UBFD1-206ENST00000566669 IGHDP01880 384 aa32.43■■■□□ 2.78
UBFD1-206ENST00000566669 CPT1AP50416 773 aa32.43■■■□□ 2.78
UBFD1-206ENST00000566669 CLEC4DQ8WXI8 215 aa32.43■■■□□ 2.78
UBFD1-206ENST00000566669 MTIF3Q9H2K0 278 aaKnown RBP32.43■■■□□ 2.78
UBFD1-206ENST00000566669 KAT14Q9H8E8 782 aa32.43■■■□□ 2.78
UBFD1-206ENST00000566669 CNNM2Q9H8M5 875 aa32.43■■■□□ 2.78
UBFD1-206ENST00000566669 PDGFCQ9NRA1 345 aa32.43■■■□□ 2.78
UBFD1-206ENST00000566669 RAD50Q92878 1312 aa32.43■■■□□ 2.78
UBFD1-206ENST00000566669 RBM47A0AV96 593 aaKnown RBP32.42■■■□□ 2.78
UBFD1-206ENST00000566669 PNMA1Q8ND90 353 aa32.42■■■□□ 2.78
UBFD1-206ENST00000566669 WDR11Q9BZH6 1224 aa32.42■■■□□ 2.78
UBFD1-206ENST00000566669 KRT23Q9C075 422 aa32.42■■■□□ 2.78
UBFD1-206ENST00000566669 NEDD4P46934 1319 aa32.42■■■□□ 2.78
UBFD1-206ENST00000566669 LRRC37A2A6NM11 1700 aa32.42■■■□□ 2.78
UBFD1-206ENST00000566669 CALML3P27482 149 aa32.41■■■□□ 2.78
UBFD1-206ENST00000566669 PDE4DQ08499 809 aa32.41■■■□□ 2.78
UBFD1-206ENST00000566669 ASPRV1Q53RT3 343 aa32.41■■■□□ 2.78
UBFD1-206ENST00000566669 RPS6P62753 249 aaKnown RBP32.4■■■□□ 2.78
UBFD1-206ENST00000566669 SCFD2Q8WU76 684 aa32.4■■■□□ 2.78
UBFD1-206ENST00000566669 BUD13Q9BRD0 619 aaKnown RBP eCLIP32.4■■■□□ 2.781e-11■□□□□ 10.5
UBFD1-206ENST00000566669 KPNA6O60684 536 aa32.39■■■□□ 2.78
UBFD1-206ENST00000566669 KDM4AO75164 1064 aa32.39■■■□□ 2.78
UBFD1-206ENST00000566669 SUPT20HL2P0C7V6 817 aa32.39■■■□□ 2.78
UBFD1-206ENST00000566669 EDNRBP24530 442 aa32.39■■■□□ 2.78
UBFD1-206ENST00000566669 EXOC6Q8TAG9 804 aa32.39■■■□□ 2.78
UBFD1-206ENST00000566669 ZSCAN10Q96SZ4 725 aaPredicted RBP32.39■■■□□ 2.78
UBFD1-206ENST00000566669 HIPK3Q9H422 1215 aa32.39■■■□□ 2.78
UBFD1-206ENST00000566669 CSF2RAP15509 400 aa32.38■■■□□ 2.77
UBFD1-206ENST00000566669 TMEM240Q5SV17 173 aa32.38■■■□□ 2.77
UBFD1-206ENST00000566669 PURBQ96QR8 312 aaKnown RBP32.38■■■□□ 2.77
UBFD1-206ENST00000566669 PPP1R12CQ9BZL4 782 aa32.38■■■□□ 2.77
UBFD1-206ENST00000566669 TTYH1Q9H313 450 aaPredicted RBP32.38■■■□□ 2.77
UBFD1-206ENST00000566669 IL23AQ9NPF7 189 aa32.38■■■□□ 2.77
UBFD1-206ENST00000566669 GPHNQ9NQX3 736 aaPredicted RBP32.38■■■□□ 2.77
UBFD1-206ENST00000566669 CUL9Q8IWT3 2517 aa32.38■■■□□ 2.77
UBFD1-206ENST00000566669 ABCB11O95342 1321 aa32.37■■■□□ 2.77
UBFD1-206ENST00000566669 DNAJB2P25686 324 aa32.37■■■□□ 2.77
UBFD1-206ENST00000566669 PPP2R5BQ15173 497 aa32.37■■■□□ 2.77
UBFD1-206ENST00000566669 RASIP1Q5U651 963 aa32.37■■■□□ 2.77
UBFD1-206ENST00000566669 SLC30A10Q6XR72 485 aa32.37■■■□□ 2.77
UBFD1-206ENST00000566669 MCF2L2Q86YR7 1114 aa32.37■■■□□ 2.77
UBFD1-206ENST00000566669 PHF6Q8IWS0 365 aaKnown RBP eCLIP32.37■■■□□ 2.77
UBFD1-206ENST00000566669 ZKSCAN3Q9BRR0 538 aa32.37■■■□□ 2.77
UBFD1-206ENST00000566669 UBAC1Q9BSL1 405 aa32.36■■■□□ 2.77
UBFD1-206ENST00000566669 LAMA4Q16363 1823 aa32.35■■■□□ 2.77
UBFD1-206ENST00000566669 MAFAQ8NHW3 353 aaPredicted RBP32.35■■■□□ 2.77
UBFD1-206ENST00000566669 ZSWIM5Q9P217 1185 aa32.35■■■□□ 2.77
UBFD1-206ENST00000566669 DDX49Q9Y6V7 483 aaKnown RBP32.35■■■□□ 2.77
UBFD1-206ENST00000566669 GRIN2DO15399 1336 aa32.34■■■□□ 2.77
UBFD1-206ENST00000566669 B4E1Z4 1266 aa32.34■■■□□ 2.77
UBFD1-206ENST00000566669 C16orf59Q7L2K0 433 aa32.34■■■□□ 2.77
UBFD1-206ENST00000566669 RPUSD2Q8IZ73 545 aaKnown RBP32.34■■■□□ 2.77
UBFD1-206ENST00000566669 ENAHQ8N8S7 591 aaPredicted RBP32.34■■■□□ 2.77
UBFD1-206ENST00000566669 OR6J1Q8NGC5 347 aa32.34■■■□□ 2.77
UBFD1-206ENST00000566669 HERVK_113Q902F9 699 aa32.34■■■□□ 2.77
UBFD1-206ENST00000566669 MTG1Q9BT17 334 aaPredicted RBP32.34■■■□□ 2.77
UBFD1-206ENST00000566669 LCTP09848 1927 aa32.34■■■□□ 2.77
UBFD1-206ENST00000566669 PARP1P09874 1014 aaKnown RBP32.33■■■□□ 2.77
UBFD1-206ENST00000566669 GOLGA8HP0CJ92 632 aa32.33■■■□□ 2.77
UBFD1-206ENST00000566669 FOSL2P15408 326 aa32.33■■■□□ 2.77
UBFD1-206ENST00000566669 CYP2C18P33260 490 aa32.33■■■□□ 2.77
UBFD1-206ENST00000566669 PURAQ00577 322 aaKnown RBP32.33■■■□□ 2.77
UBFD1-206ENST00000566669 TTLL4Q14679 1199 aa32.33■■■□□ 2.77
UBFD1-206ENST00000566669 CDC37Q16543 378 aaPredicted RBP32.33■■■□□ 2.77
UBFD1-206ENST00000566669 ZNF365Q70YC5 407 aa32.33■■■□□ 2.77
UBFD1-206ENST00000566669 TIFAQ96CG3 184 aa32.33■■■□□ 2.77
UBFD1-206ENST00000566669 ALDH8A1Q9H2A2 487 aaPredicted RBP32.33■■■□□ 2.77
UBFD1-206ENST00000566669 TNKSO95271 1327 aa32.32■■■□□ 2.76
UBFD1-206ENST00000566669 B4GALT4O60513 344 aa32.32■■■□□ 2.76
UBFD1-206ENST00000566669 FGBP02675 491 aa32.32■■■□□ 2.76
UBFD1-206ENST00000566669 USH1GQ495M9 461 aa32.32■■■□□ 2.76
UBFD1-206ENST00000566669 NSUN6Q8TEA1 469 aaKnown RBP32.32■■■□□ 2.76
UBFD1-206ENST00000566669 RUFY2Q8WXA3 655 aa32.32■■■□□ 2.76
UBFD1-206ENST00000566669 IWS1Q96ST2 819 aa32.32■■■□□ 2.76
UBFD1-206ENST00000566669 NOC4LQ9BVI4 516 aaKnown RBP32.32■■■□□ 2.76
UBFD1-206ENST00000566669 UBA5Q9GZZ9 404 aa32.32■■■□□ 2.76
UBFD1-206ENST00000566669 MRPL11Q9Y3B7 192 aaKnown RBP32.32■■■□□ 2.76
UBFD1-206ENST00000566669 A6NJR5 290 aa32.31■■■□□ 2.76
UBFD1-206ENST00000566669 PFKMP08237 780 aa32.31■■■□□ 2.76
UBFD1-206ENST00000566669 RAB30Q15771 203 aa32.31■■■□□ 2.76
UBFD1-206ENST00000566669 ADGRF4Q8IZF3 695 aa32.31■■■□□ 2.76
UBFD1-206ENST00000566669 MYLIPQ8WY64 445 aa32.31■■■□□ 2.76
UBFD1-206ENST00000566669 PTPN11Q06124 597 aaPredicted RBP32.3■■■□□ 2.76
UBFD1-206ENST00000566669 TRAF1Q13077 416 aa32.3■■■□□ 2.76
UBFD1-206ENST00000566669 TRPV6Q9H1D0 765 aa32.3■■■□□ 2.76
UBFD1-206ENST00000566669 ZNF576Q9H609 170 aa32.3■■■□□ 2.76
UBFD1-206ENST00000566669 UNC80Q8N2C7 3258 aa32.3■■■□□ 2.76
UBFD1-206ENST00000566669 TXNP10599 105 aaKnown RBP32.29■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms