RNA–Protein interactions for RNA: ENST00000566635.5

HERC2-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-208ENST00000566635 FERMT2Q96AC1 680 aa20.12■□□□□ 0.81
HERC2-208ENST00000566635 HPSEQ9Y251 543 aa20.12■□□□□ 0.81
HERC2-208ENST00000566635 A0A0G2JLL6 359 aaPredicted RBP20.11■□□□□ 0.81
HERC2-208ENST00000566635 DSG3P32926 999 aa20.11■□□□□ 0.81
HERC2-208ENST00000566635 PPIL2Q13356 520 aa20.11■□□□□ 0.81
HERC2-208ENST00000566635 GADL1Q6ZQY3 521 aa20.11■□□□□ 0.81
HERC2-208ENST00000566635 USP49Q70CQ1 688 aa20.11■□□□□ 0.81
HERC2-208ENST00000566635 PRRT2Q7Z6L0 340 aaPredicted RBP20.11■□□□□ 0.81
HERC2-208ENST00000566635 POTEDQ86YR6 584 aa20.11■□□□□ 0.81
HERC2-208ENST00000566635 NEMFO60524 1076 aa20.11■□□□□ 0.81
HERC2-208ENST00000566635 ZBED4O75132 1171 aa20.11■□□□□ 0.81
HERC2-208ENST00000566635 ALAS1P13196 640 aa20.11■□□□□ 0.81
HERC2-208ENST00000566635 ZNF579Q8NAF0 562 aaKnown RBP20.11■□□□□ 0.81
HERC2-208ENST00000566635 TNMDQ9H2S6 317 aa20.11■□□□□ 0.81
HERC2-208ENST00000566635 HOMER2Q9NSB8 354 aa20.11■□□□□ 0.81
HERC2-208ENST00000566635 CTDP1Q9Y5B0 961 aaPredicted RBP20.11■□□□□ 0.81
HERC2-208ENST00000566635 FAM237AA0A1B0GTK4 181 aa20.1■□□□□ 0.81
HERC2-208ENST00000566635 PIK3CDO00329 1044 aa20.1■□□□□ 0.81
HERC2-208ENST00000566635 NFIBO00712 420 aa20.1■□□□□ 0.81
HERC2-208ENST00000566635 SLC37A4O43826 429 aa20.1■□□□□ 0.81
HERC2-208ENST00000566635 KINO60870 393 aaKnown RBP20.1■□□□□ 0.81
HERC2-208ENST00000566635 GJA5P36382 358 aa20.1■□□□□ 0.81
HERC2-208ENST00000566635 REPS2Q8NFH8 660 aa20.1■□□□□ 0.81
HERC2-208ENST00000566635 A0A0G2JMZ2 1700 aa20.09■□□□□ 0.81
HERC2-208ENST00000566635 SPDYE3A6NKU9 549 aa20.09■□□□□ 0.81
HERC2-208ENST00000566635 COG2Q14746 738 aa20.09■□□□□ 0.81
HERC2-208ENST00000566635 FCHSD1Q86WN1 690 aa20.09■□□□□ 0.81
HERC2-208ENST00000566635 CLEC4DQ8WXI8 215 aa20.09■□□□□ 0.81
HERC2-208ENST00000566635 KCNH4Q9UQ05 1017 aa20.09■□□□□ 0.81
HERC2-208ENST00000566635 SPDYE16A6NNV3 312 aaPredicted RBP20.09■□□□□ 0.81
HERC2-208ENST00000566635 GCOM1H8Y6P7 765 aaPredicted RBP20.09■□□□□ 0.81
HERC2-208ENST00000566635 POLR2MP0CAP2 368 aa20.09■□□□□ 0.81
HERC2-208ENST00000566635 SYKP43405 635 aa20.09■□□□□ 0.81
HERC2-208ENST00000566635 MUM1L1Q5H9M0 696 aa20.09■□□□□ 0.81
HERC2-208ENST00000566635 ARL6IP4Q66PJ3 421 aaKnown RBP20.09■□□□□ 0.81
HERC2-208ENST00000566635 LRSAM1Q6UWE0 723 aa20.09■□□□□ 0.81
HERC2-208ENST00000566635 CKAP2LQ8IYA6 745 aa20.09■□□□□ 0.81
HERC2-208ENST00000566635 EPSTI1Q96J88 318 aa20.09■□□□□ 0.81
HERC2-208ENST00000566635 ADAMTS5Q9UNA0 930 aa20.09■□□□□ 0.81
HERC2-208ENST00000566635 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.08■□□□□ 0.81
HERC2-208ENST00000566635 ZNF202O95125 648 aa20.08■□□□□ 0.81
HERC2-208ENST00000566635 CELF2O95319 508 aaKnown RBP20.08■□□□□ 0.81
HERC2-208ENST00000566635 OR52Z1P0C646 297 aa20.08■□□□□ 0.81
HERC2-208ENST00000566635 CRYGNQ8WXF5 182 aa20.08■□□□□ 0.81
HERC2-208ENST00000566635 SYMPKQ92797 1274 aaKnown RBP20.08■□□□□ 0.81
HERC2-208ENST00000566635 KCNH3Q9ULD8 1083 aa20.08■□□□□ 0.81
HERC2-208ENST00000566635 CXCL11O14625 94 aa20.08■□□□□ 0.8
HERC2-208ENST00000566635 FDX1P10109 184 aa20.08■□□□□ 0.8
HERC2-208ENST00000566635 ORC2Q13416 577 aaPredicted RBP20.08■□□□□ 0.8
HERC2-208ENST00000566635 PROCA1Q8NCQ7 364 aaPredicted RBP20.08■□□□□ 0.8
HERC2-208ENST00000566635 GBA2Q9HCG7 927 aaPredicted RBP20.08■□□□□ 0.8
HERC2-208ENST00000566635 FAM13BQ9NYF5 915 aa20.08■□□□□ 0.8
HERC2-208ENST00000566635 FOSP01100 380 aaPredicted RBP20.07■□□□□ 0.8
HERC2-208ENST00000566635 ARHGAP4P98171 946 aa20.07■□□□□ 0.8
HERC2-208ENST00000566635 TMEM132BQ14DG7 1078 aa20.07■□□□□ 0.8
HERC2-208ENST00000566635 ZNF214Q9UL59 606 aaPredicted RBP20.07■□□□□ 0.8
HERC2-208ENST00000566635 RIPK3Q9Y572 518 aa20.07■□□□□ 0.8
HERC2-208ENST00000566635 LAD1O00515 517 aa20.06■□□□□ 0.8
HERC2-208ENST00000566635 LETM1O95202 739 aaPredicted RBP20.06■□□□□ 0.8
HERC2-208ENST00000566635 SREBF1P36956 1147 aa20.06■□□□□ 0.8
HERC2-208ENST00000566635 MOGSQ13724 837 aa20.06■□□□□ 0.8
HERC2-208ENST00000566635 MCTP2Q6DN12 878 aa20.06■□□□□ 0.8
HERC2-208ENST00000566635 PPP4R3AQ6IN85 833 aa20.06■□□□□ 0.8
HERC2-208ENST00000566635 DTHD1Q6ZMT9 781 aa20.06■□□□□ 0.8
HERC2-208ENST00000566635 RBM43Q6ZSC3 357 aaKnown RBP20.06■□□□□ 0.8
HERC2-208ENST00000566635 DDX25Q9UHL0 483 aaKnown RBP20.06■□□□□ 0.8
HERC2-208ENST00000566635 PRPHP41219 470 aa20.06■□□□□ 0.8
HERC2-208ENST00000566635 CALCRLQ16602 461 aa20.06■□□□□ 0.8
HERC2-208ENST00000566635 SNRNP48Q6IEG0 339 aaKnown RBP20.06■□□□□ 0.8
HERC2-208ENST00000566635 SLC10A4Q96EP9 437 aa20.06■□□□□ 0.8
HERC2-208ENST00000566635 PANK2Q9BZ23 570 aa20.06■□□□□ 0.8
HERC2-208ENST00000566635 MYPNQ86TC9 1320 aa20.06■□□□□ 0.8
HERC2-208ENST00000566635 A0A087X0B3 334 aa20.05■□□□□ 0.8
HERC2-208ENST00000566635 FSD2A1L4K1 749 aa20.05■□□□□ 0.8
HERC2-208ENST00000566635 PEX10O60683 326 aa20.05■□□□□ 0.8
HERC2-208ENST00000566635 HSD17B4P51659 736 aa20.05■□□□□ 0.8
HERC2-208ENST00000566635 POTEEQ6S8J3 1075 aa20.05■□□□□ 0.8
HERC2-208ENST00000566635 PDILTQ8N807 584 aa20.05■□□□□ 0.8
HERC2-208ENST00000566635 ERCC4Q92889 916 aaPredicted RBP20.05■□□□□ 0.8
HERC2-208ENST00000566635 TRERF1Q96PN7 1200 aa20.05■□□□□ 0.8
HERC2-208ENST00000566635 MTMR9Q96QG7 549 aa20.05■□□□□ 0.8
HERC2-208ENST00000566635 COL20A1Q9P218 1284 aa20.05■□□□□ 0.8
HERC2-208ENST00000566635 PP2D1A8MPX8 630 aa20.05■□□□□ 0.8
HERC2-208ENST00000566635 POLR2DO15514 142 aaKnown RBP20.05■□□□□ 0.8
HERC2-208ENST00000566635 USP11P51784 963 aa20.05■□□□□ 0.8
HERC2-208ENST00000566635 UBXN2AP68543 259 aa20.05■□□□□ 0.8
HERC2-208ENST00000566635 RNF146Q9NTX7 359 aa20.05■□□□□ 0.8
HERC2-208ENST00000566635 HOXC10Q9NYD6 342 aa20.05■□□□□ 0.8
HERC2-208ENST00000566635 GOLGA6L3A6NEY3 463 aa20.04■□□□□ 0.8
HERC2-208ENST00000566635 GCFC2P16383 781 aaKnown RBP20.04■□□□□ 0.8
HERC2-208ENST00000566635 CDC25AP30304 524 aa20.04■□□□□ 0.8
HERC2-208ENST00000566635 LONP1P36776 959 aaKnown RBP20.04■□□□□ 0.8
HERC2-208ENST00000566635 OAZ1P54368 228 aa20.04■□□□□ 0.8
HERC2-208ENST00000566635 FKBP1BP68106 108 aa20.04■□□□□ 0.8
HERC2-208ENST00000566635 MKRN3Q13064 507 aaKnown RBP20.04■□□□□ 0.8
HERC2-208ENST00000566635 LONRF3Q496Y0 759 aa20.04■□□□□ 0.8
HERC2-208ENST00000566635 TEX2Q8IWB9 1127 aa20.04■□□□□ 0.8
HERC2-208ENST00000566635 GJA10Q969M2 543 aa20.04■□□□□ 0.8
HERC2-208ENST00000566635 FUCA2Q9BTY2 467 aa20.04■□□□□ 0.8
HERC2-208ENST00000566635 AGTPBP1Q9UPW5 1226 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms