RNA–Protein interactions for RNA: ENST00000566557.5

SCAMP2-208, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-208ENST00000566557 TPCN1Q9ULQ1 816 aa18.9■□□□□ 0.62
SCAMP2-208ENST00000566557 POTEB2H3BUK9 544 aa18.89■□□□□ 0.61
SCAMP2-208ENST00000566557 PPFIA3O75145 1194 aa18.89■□□□□ 0.61
SCAMP2-208ENST00000566557 HMGCRP04035 888 aa18.89■□□□□ 0.61
SCAMP2-208ENST00000566557 XRCC5P13010 732 aaKnown RBP18.89■□□□□ 0.61
SCAMP2-208ENST00000566557 CALML3P27482 149 aa18.89■□□□□ 0.61
SCAMP2-208ENST00000566557 MNX1P50219 401 aaPredicted RBP18.89■□□□□ 0.61
SCAMP2-208ENST00000566557 SLC30A10Q6XR72 485 aa18.89■□□□□ 0.61
SCAMP2-208ENST00000566557 HEATR3Q7Z4Q2 680 aa18.89■□□□□ 0.61
SCAMP2-208ENST00000566557 TRMT44Q8IYL2 757 aaKnown RBP18.89■□□□□ 0.61
SCAMP2-208ENST00000566557 CLEC4DQ8WXI8 215 aa18.89■□□□□ 0.61
SCAMP2-208ENST00000566557 A0A1W2PPC1 479 aa18.88■□□□□ 0.61
SCAMP2-208ENST00000566557 INHAP05111 366 aa18.88■□□□□ 0.61
SCAMP2-208ENST00000566557 HOXC6P09630 235 aa18.88■□□□□ 0.61
SCAMP2-208ENST00000566557 UBXN2AP68543 259 aa18.88■□□□□ 0.61
SCAMP2-208ENST00000566557 AKAP17AQ02040 695 aaKnown RBP18.88■□□□□ 0.61
SCAMP2-208ENST00000566557 BAATQ14032 418 aaPredicted RBP18.88■□□□□ 0.61
SCAMP2-208ENST00000566557 CPLX2Q6PUV4 134 aaKnown RBP18.88■□□□□ 0.61
SCAMP2-208ENST00000566557 RNF207Q6ZRF8 634 aa18.88■□□□□ 0.61
SCAMP2-208ENST00000566557 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.88■□□□□ 0.61
SCAMP2-208ENST00000566557 PXYLP1Q8TE99 480 aa18.88■□□□□ 0.61
SCAMP2-208ENST00000566557 GPKOWQ92917 476 aaPredicted RBP eCLIP18.88■□□□□ 0.61
SCAMP2-208ENST00000566557 PHKBQ93100 1093 aa18.88■□□□□ 0.61
SCAMP2-208ENST00000566557 CYP39A1Q9NYL5 469 aa18.88■□□□□ 0.61
SCAMP2-208ENST00000566557 ST18O60284 1047 aa18.87■□□□□ 0.61
SCAMP2-208ENST00000566557 EVI5O60447 810 aa18.87■□□□□ 0.61
SCAMP2-208ENST00000566557 FARP2O94887 1054 aaPredicted RBP18.87■□□□□ 0.61
SCAMP2-208ENST00000566557 LARGE1O95461 756 aa18.87■□□□□ 0.61
SCAMP2-208ENST00000566557 CFBP00751 764 aa18.87■□□□□ 0.61
SCAMP2-208ENST00000566557 LCTP09848 1927 aa18.87■□□□□ 0.61
SCAMP2-208ENST00000566557 CNTN2Q02246 1040 aa18.87■□□□□ 0.61
SCAMP2-208ENST00000566557 ZNF792Q3KQV3 632 aa18.87■□□□□ 0.61
SCAMP2-208ENST00000566557 MFSD14CQ5VZR4 134 aa18.87■□□□□ 0.61
SCAMP2-208ENST00000566557 MCF2L2Q86YR7 1114 aa18.87■□□□□ 0.61
SCAMP2-208ENST00000566557 MAML3Q96JK9 1138 aa18.87■□□□□ 0.61
SCAMP2-208ENST00000566557 SLC26A6Q9BXS9 759 aa18.87■□□□□ 0.61
SCAMP2-208ENST00000566557 FLRT1Q9NZU1 646 aa18.87■□□□□ 0.61
SCAMP2-208ENST00000566557 V9GY48 417 aaPredicted RBP18.87■□□□□ 0.61
SCAMP2-208ENST00000566557 DNAJC25-GNG10A0A024R161 153 aa18.86■□□□□ 0.61
SCAMP2-208ENST00000566557 FUT2Q10981 343 aa18.86■□□□□ 0.61
SCAMP2-208ENST00000566557 SCRN1Q12765 414 aa18.86■□□□□ 0.61
SCAMP2-208ENST00000566557 TRIM32Q13049 653 aa18.86■□□□□ 0.61
SCAMP2-208ENST00000566557 NECAB1Q8N987 351 aa18.86■□□□□ 0.61
SCAMP2-208ENST00000566557 U2AF1L4Q8WU68 220 aaKnown RBP18.86■□□□□ 0.61
SCAMP2-208ENST00000566557 PFKFB2O60825 505 aa18.85■□□□□ 0.61
SCAMP2-208ENST00000566557 IFNAR1P17181 557 aa18.85■□□□□ 0.61
SCAMP2-208ENST00000566557 CYP2C19P33261 490 aa18.85■□□□□ 0.61
SCAMP2-208ENST00000566557 RPS6P62753 249 aaKnown RBP18.85■□□□□ 0.61
SCAMP2-208ENST00000566557 ME3Q16798 604 aa18.85■□□□□ 0.61
SCAMP2-208ENST00000566557 TRIM22Q8IYM9 498 aa18.85■□□□□ 0.61
SCAMP2-208ENST00000566557 CDKL5O76039 1030 aa18.84■□□□□ 0.61
SCAMP2-208ENST00000566557 PRKAR2AP13861 404 aaKnown RBP18.84■□□□□ 0.61
SCAMP2-208ENST00000566557 NAPAP54920 295 aa18.84■□□□□ 0.61
SCAMP2-208ENST00000566557 SSRP1Q08945 709 aaKnown RBP18.84■□□□□ 0.61
SCAMP2-208ENST00000566557 OLFML2BQ68BL8 750 aa18.84■□□□□ 0.61
SCAMP2-208ENST00000566557 WWC2Q6AWC2 1192 aa18.84■□□□□ 0.61
SCAMP2-208ENST00000566557 FAM133AQ8N9E0 248 aa18.84■□□□□ 0.61
SCAMP2-208ENST00000566557 TBC1D5Q92609 795 aa18.84■□□□□ 0.61
SCAMP2-208ENST00000566557 PURBQ96QR8 312 aaKnown RBP18.84■□□□□ 0.61
SCAMP2-208ENST00000566557 RNF26Q9BY78 433 aaPredicted RBP18.84■□□□□ 0.61
SCAMP2-208ENST00000566557 LIMCH1Q9UPQ0 1083 aa18.84■□□□□ 0.61
SCAMP2-208ENST00000566557 DIS3Q9Y2L1 958 aaKnown RBP18.84■□□□□ 0.61
SCAMP2-208ENST00000566557 UNC80Q8N2C7 3258 aa18.84■□□□□ 0.61
SCAMP2-208ENST00000566557 SOWAHBA6NEL2 793 aa18.83■□□□□ 0.6
SCAMP2-208ENST00000566557 SGPL1O95470 568 aa18.83■□□□□ 0.6
SCAMP2-208ENST00000566557 SCG2P13521 617 aa18.83■□□□□ 0.6
SCAMP2-208ENST00000566557 HOXA13P31271 388 aaPredicted RBP18.83■□□□□ 0.6
SCAMP2-208ENST00000566557 NTRK3Q16288 839 aa18.83■□□□□ 0.6
SCAMP2-208ENST00000566557 CUL5Q93034 780 aa18.83■□□□□ 0.6
SCAMP2-208ENST00000566557 GTF3C6Q969F1 213 aa18.83■□□□□ 0.6
SCAMP2-208ENST00000566557 TINF2Q9BSI4 451 aa18.83■□□□□ 0.6
SCAMP2-208ENST00000566557 UNC93B1Q9H1C4 597 aa18.83■□□□□ 0.6
SCAMP2-208ENST00000566557 ADD3Q9UEY8 706 aaKnown RBP18.83■□□□□ 0.6
SCAMP2-208ENST00000566557 LRRC37A2A6NM11 1700 aa18.83■□□□□ 0.6
SCAMP2-208ENST00000566557 GCOM1H8Y6P7 765 aaPredicted RBP18.82■□□□□ 0.6
SCAMP2-208ENST00000566557 hCG_1984214I3L0E3 225 aa18.82■□□□□ 0.6
SCAMP2-208ENST00000566557 OPLAHO14841 1288 aa18.82■□□□□ 0.6
SCAMP2-208ENST00000566557 PRPF3O43395 683 aaKnown RBP18.82■□□□□ 0.6
SCAMP2-208ENST00000566557 DTNBO60941 627 aa18.82■□□□□ 0.6
SCAMP2-208ENST00000566557 TFRCP02786 760 aaKnown RBP18.82■□□□□ 0.6
SCAMP2-208ENST00000566557 POLR2MP0CAP2 368 aa18.82■□□□□ 0.6
SCAMP2-208ENST00000566557 CNGA1P29973 690 aa18.82■□□□□ 0.6
SCAMP2-208ENST00000566557 CACNB2Q08289 660 aaPredicted RBP18.82■□□□□ 0.6
SCAMP2-208ENST00000566557 PFKFB3Q16875 520 aaPredicted RBP18.82■□□□□ 0.6
SCAMP2-208ENST00000566557 ZNF713Q8N859 430 aaPredicted RBP18.82■□□□□ 0.6
SCAMP2-208ENST00000566557 RGS22Q8NE09 1264 aa18.82■□□□□ 0.6
SCAMP2-208ENST00000566557 SMARCC2Q8TAQ2 1214 aa18.82■□□□□ 0.6
SCAMP2-208ENST00000566557 FGD4Q96M96 766 aa18.82■□□□□ 0.6
SCAMP2-208ENST00000566557 MCM3APO60318 1980 aa18.81■□□□□ 0.6
SCAMP2-208ENST00000566557 STXBP3O00186 592 aa18.81■□□□□ 0.6
SCAMP2-208ENST00000566557 ALDH5A1P51649 535 aaPredicted RBP18.81■□□□□ 0.6
SCAMP2-208ENST00000566557 PPP1R18Q6NYC8 613 aa18.81■□□□□ 0.6
SCAMP2-208ENST00000566557 ARMCX2Q7L311 632 aa18.81■□□□□ 0.6
SCAMP2-208ENST00000566557 ZNF467Q7Z7K2 595 aaPredicted RBP18.81■□□□□ 0.6
SCAMP2-208ENST00000566557 FCHSD1Q86WN1 690 aa18.81■□□□□ 0.6
SCAMP2-208ENST00000566557 CCDC83Q8IWF9 413 aa18.81■□□□□ 0.6
SCAMP2-208ENST00000566557 DEFB123Q8N688 67 aa18.81■□□□□ 0.6
SCAMP2-208ENST00000566557 SYTL5Q8TDW5 730 aaPredicted RBP18.81■□□□□ 0.6
SCAMP2-208ENST00000566557 ZSCAN31Q96LW9 406 aaPredicted RBP18.81■□□□□ 0.6
SCAMP2-208ENST00000566557 MPHOSPH6Q99547 160 aaKnown RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms