RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 TTYH3Q9C0H2 523 aa15.88■□□□□ 0.13
CDH1-209ENST00000566510 DEF6Q9H4E7 631 aa15.88■□□□□ 0.13
CDH1-209ENST00000566510 KIAA1551Q9HCM1 1747 aa15.88■□□□□ 0.13
CDH1-209ENST00000566510 SEC63Q9UGP8 760 aaKnown RBP15.88■□□□□ 0.13
CDH1-209ENST00000566510 STRCQ7RTU9 1775 aa15.88■□□□□ 0.13
CDH1-209ENST00000566510 FLT1P17948 1338 aa15.88■□□□□ 0.13
CDH1-209ENST00000566510 EIF3CLB5ME19 914 aaKnown RBP15.88■□□□□ 0.13
CDH1-209ENST00000566510 RNF40O75150 1001 aa15.88■□□□□ 0.13
CDH1-209ENST00000566510 ZPR1O75312 459 aa15.88■□□□□ 0.13
CDH1-209ENST00000566510 MCM3P25205 808 aa15.88■□□□□ 0.13
CDH1-209ENST00000566510 C2orf54Q08AI8 447 aa15.88■□□□□ 0.13
CDH1-209ENST00000566510 GRIK5Q16478 980 aa15.88■□□□□ 0.13
CDH1-209ENST00000566510 SLC10A5Q5PT55 438 aa15.88■□□□□ 0.13
CDH1-209ENST00000566510 DYMQ7RTS9 669 aa15.88■□□□□ 0.13
CDH1-209ENST00000566510 C2CD5Q86YS7 1000 aa15.88■□□□□ 0.13
CDH1-209ENST00000566510 CCDC170Q8IYT3 715 aa15.88■□□□□ 0.13
CDH1-209ENST00000566510 RETREG2Q8NC44 543 aa15.88■□□□□ 0.13
CDH1-209ENST00000566510 DAGLBQ8NCG7 672 aa15.88■□□□□ 0.13
CDH1-209ENST00000566510 CALML4Q96GE6 196 aa15.88■□□□□ 0.13
CDH1-209ENST00000566510 AK8Q96MA6 479 aa15.88■□□□□ 0.13
CDH1-209ENST00000566510 GPR101Q96P66 508 aaPredicted RBP15.88■□□□□ 0.13
CDH1-209ENST00000566510 EIF3CQ99613 913 aaKnown RBP15.88■□□□□ 0.13
CDH1-209ENST00000566510 CUEDC2Q9H467 287 aa15.88■□□□□ 0.13
CDH1-209ENST00000566510 MMRN2Q9H8L6 949 aa15.88■□□□□ 0.13
CDH1-209ENST00000566510 C6orf50Q9HD87 102 aa15.88■□□□□ 0.13
CDH1-209ENST00000566510 PALM3A6NDB9 673 aaPredicted RBP15.87■□□□□ 0.13
CDH1-209ENST00000566510 MATR3P43243 847 aaKnown RBP eCLIP15.87■□□□□ 0.13
CDH1-209ENST00000566510 MIIPQ5JXC2 388 aa15.87■□□□□ 0.13
CDH1-209ENST00000566510 CNNM4Q6P4Q7 775 aa15.87■□□□□ 0.13
CDH1-209ENST00000566510 TPTE2Q6XPS3 522 aa15.87■□□□□ 0.13
CDH1-209ENST00000566510 KRT25Q7Z3Z0 450 aa15.87■□□□□ 0.13
CDH1-209ENST00000566510 NEK8Q86SG6 692 aa15.87■□□□□ 0.13
CDH1-209ENST00000566510 TBCKQ8TEA7 893 aa15.87■□□□□ 0.13
CDH1-209ENST00000566510 RIN2Q8WYP3 895 aaPredicted RBP15.87■□□□□ 0.13
CDH1-209ENST00000566510 PSMB7Q99436 277 aa15.87■□□□□ 0.13
CDH1-209ENST00000566510 MED4Q9NPJ6 270 aa15.87■□□□□ 0.13
CDH1-209ENST00000566510 MKRN1Q9UHC7 482 aaKnown RBP15.87■□□□□ 0.13
CDH1-209ENST00000566510 LCMT1Q9UIC8 334 aa15.87■□□□□ 0.13
CDH1-209ENST00000566510 GNA11P29992 359 aa15.87■□□□□ 0.13
CDH1-209ENST00000566510 C10orf67Q8IYJ2 551 aa15.87■□□□□ 0.13
CDH1-209ENST00000566510 RRP36Q96EU6 259 aaKnown RBP15.87■□□□□ 0.13
CDH1-209ENST00000566510 ZMYND12Q9H0C1 365 aa15.87■□□□□ 0.13
CDH1-209ENST00000566510 PDE2AO00408 941 aaPredicted RBP15.86■□□□□ 0.13
CDH1-209ENST00000566510 POTEDQ86YR6 584 aa15.86■□□□□ 0.13
CDH1-209ENST00000566510 MSL3Q8N5Y2 521 aaKnown RBP15.86■□□□□ 0.13
CDH1-209ENST00000566510 ANKS1AQ92625 1134 aa15.86■□□□□ 0.13
CDH1-209ENST00000566510 CDK5RAP3Q96JB5 506 aa15.86■□□□□ 0.13
CDH1-209ENST00000566510 CRACR2AQ9BSW2 395 aa15.86■□□□□ 0.13
CDH1-209ENST00000566510 IFIH1Q9BYX4 1025 aaKnown RBP15.86■□□□□ 0.13
CDH1-209ENST00000566510 UBA5Q9GZZ9 404 aa15.86■□□□□ 0.13
CDH1-209ENST00000566510 TMEM51Q9NW97 253 aa15.86■□□□□ 0.13
CDH1-209ENST00000566510 THRAP3Q9Y2W1 955 aaKnown RBP15.86■□□□□ 0.13
CDH1-209ENST00000566510 RASA1P20936 1047 aa15.86■□□□□ 0.13
CDH1-209ENST00000566510 MRPS25P82663 173 aaKnown RBP15.86■□□□□ 0.13
CDH1-209ENST00000566510 MAPK8IP2Q13387 824 aaPredicted RBP15.86■□□□□ 0.13
CDH1-209ENST00000566510 SV2BQ7L1I2 683 aa15.86■□□□□ 0.13
CDH1-209ENST00000566510 KIAA0895Q8NCT3 520 aa15.86■□□□□ 0.13
CDH1-209ENST00000566510 WDR66Q8TBY9 1149 aa15.86■□□□□ 0.13
CDH1-209ENST00000566510 EYA3Q99504 573 aa15.86■□□□□ 0.13
CDH1-209ENST00000566510 C7orf25Q9BPX7 421 aa15.86■□□□□ 0.13
CDH1-209ENST00000566510 MAGEF1Q9HAY2 307 aa15.86■□□□□ 0.13
CDH1-209ENST00000566510 TMEM260Q9NX78 707 aa15.86■□□□□ 0.13
CDH1-209ENST00000566510 COL22A1Q8NFW1 1626 aaPredicted RBP15.86■□□□□ 0.13
CDH1-209ENST00000566510 USO1O60763 962 aaKnown RBP15.85■□□□□ 0.13
CDH1-209ENST00000566510 VAV2P52735 878 aa15.85■□□□□ 0.13
CDH1-209ENST00000566510 RPGRIP1Q96KN7 1286 aa15.85■□□□□ 0.13
CDH1-209ENST00000566510 PIGSQ96S52 555 aa15.85■□□□□ 0.13
CDH1-209ENST00000566510 SEMA6BQ9H3T3 888 aa15.85■□□□□ 0.13
CDH1-209ENST00000566510 ZNF263O14978 683 aa15.85■□□□□ 0.13
CDH1-209ENST00000566510 AKR1B10O60218 316 aa15.85■□□□□ 0.13
CDH1-209ENST00000566510 CXCR5P32302 372 aa15.85■□□□□ 0.13
CDH1-209ENST00000566510 ATP2B2Q01814 1243 aa15.85■□□□□ 0.13
CDH1-209ENST00000566510 CCDC70Q6NSX1 233 aa15.85■□□□□ 0.13
CDH1-209ENST00000566510 FOXR1Q6PIV2 292 aa15.85■□□□□ 0.13
CDH1-209ENST00000566510 LZTS2Q9BRK4 669 aa15.85■□□□□ 0.13
CDH1-209ENST00000566510 PLEKHA4Q9H4M7 779 aa15.85■□□□□ 0.13
CDH1-209ENST00000566510 MLXIPQ9HAP2 919 aa15.85■□□□□ 0.13
CDH1-209ENST00000566510 HPCAL4Q9UM19 191 aa15.85■□□□□ 0.13
CDH1-209ENST00000566510 TRIM66O15016 1216 aa15.84■□□□□ 0.13
CDH1-209ENST00000566510 GNPATO15228 680 aa15.84■□□□□ 0.13
CDH1-209ENST00000566510 MOCS3O95396 460 aa15.84■□□□□ 0.13
CDH1-209ENST00000566510 MYBL2P10244 700 aa15.84■□□□□ 0.13
CDH1-209ENST00000566510 GSTO1P78417 241 aa15.84■□□□□ 0.13
CDH1-209ENST00000566510 REXO1Q8N1G1 1221 aaKnown RBP15.84■□□□□ 0.13
CDH1-209ENST00000566510 COG1Q8WTW3 980 aa15.84■□□□□ 0.13
CDH1-209ENST00000566510 TANGO6Q9C0B7 1094 aa15.84■□□□□ 0.13
CDH1-209ENST00000566510 ZNF287Q9HBT7 754 aa15.84■□□□□ 0.13
CDH1-209ENST00000566510 FEZ2Q9UHY8 353 aaPredicted RBP15.84■□□□□ 0.13
CDH1-209ENST00000566510 WNK3Q9BYP7 1800 aa15.84■□□□□ 0.13
CDH1-209ENST00000566510 MYO1CO00159 1063 aa15.84■□□□□ 0.13
CDH1-209ENST00000566510 EPHB6O15197 1021 aa15.84■□□□□ 0.13
CDH1-209ENST00000566510 TACC1O75410 805 aa15.84■□□□□ 0.13
CDH1-209ENST00000566510 SYF2O95926 243 aaKnown RBP15.84■□□□□ 0.13
CDH1-209ENST00000566510 IVLP07476 585 aa15.84■□□□□ 0.13
CDH1-209ENST00000566510 CDK8P49336 464 aa15.84■□□□□ 0.13
CDH1-209ENST00000566510 NAP1L1P55209 391 aaKnown RBP15.84■□□□□ 0.13
CDH1-209ENST00000566510 IQCEQ6IPM2 695 aa15.84■□□□□ 0.13
CDH1-209ENST00000566510 RRAGAQ7L523 313 aa15.84■□□□□ 0.13
CDH1-209ENST00000566510 ANKRD13CQ8N6S4 541 aa15.84■□□□□ 0.13
CDH1-209ENST00000566510 AFAP1L1Q8TED9 768 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms