RNA–Protein interactions for RNA: ENST00000566296.1

TSR3-202, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

TSL 3

Gene TSR3, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-202ENST00000566296 MSRAQ9UJ68 235 aa19.44■□□□□ 0.7
TSR3-202ENST00000566296 CCDC171Q6TFL3 1326 aa19.44■□□□□ 0.7
TSR3-202ENST00000566296 NFIBO00712 420 aa19.43■□□□□ 0.7
TSR3-202ENST00000566296 B4GALT4O60513 344 aa19.43■□□□□ 0.7
TSR3-202ENST00000566296 FGBP02675 491 aa19.43■□□□□ 0.7
TSR3-202ENST00000566296 HSPD1P10809 573 aaKnown RBP19.43■□□□□ 0.7
TSR3-202ENST00000566296 PDHBP11177 359 aa19.43■□□□□ 0.7
TSR3-202ENST00000566296 PCP11498 1178 aaKnown RBP19.43■□□□□ 0.7
TSR3-202ENST00000566296 CALML3P27482 149 aa19.43■□□□□ 0.7
TSR3-202ENST00000566296 PBX2P40425 430 aa19.43■□□□□ 0.7
TSR3-202ENST00000566296 HAND2P61296 217 aa19.43■□□□□ 0.7
TSR3-202ENST00000566296 PSMC6P62333 389 aa19.43■□□□□ 0.7
TSR3-202ENST00000566296 HDAC1Q13547 482 aaPredicted RBP19.43■□□□□ 0.7
TSR3-202ENST00000566296 SYMPKQ92797 1274 aaKnown RBP19.43■□□□□ 0.7
TSR3-202ENST00000566296 EYSQ5T1H1 3165 aa19.42■□□□□ 0.7
TSR3-202ENST00000566296 GBF1Q92538 1859 aa19.42■□□□□ 0.7
TSR3-202ENST00000566296 TRIM6-TRIM34B2RNG4 842 aa19.42■□□□□ 0.7
TSR3-202ENST00000566296 CPT1AP50416 773 aa19.42■□□□□ 0.7
TSR3-202ENST00000566296 NMIQ13287 307 aaPredicted RBP19.42■□□□□ 0.7
TSR3-202ENST00000566296 BRDTQ58F21 947 aaPredicted RBP19.42■□□□□ 0.7
TSR3-202ENST00000566296 SLC30A10Q6XR72 485 aa19.42■□□□□ 0.7
TSR3-202ENST00000566296 RNF207Q6ZRF8 634 aa19.42■□□□□ 0.7
TSR3-202ENST00000566296 MFSD6Q6ZSS7 791 aa19.42■□□□□ 0.7
TSR3-202ENST00000566296 NOC4LQ9BVI4 516 aaKnown RBP19.42■□□□□ 0.7
TSR3-202ENST00000566296 WDR11Q9BZH6 1224 aa19.42■□□□□ 0.7
TSR3-202ENST00000566296 RNF41Q9H4P4 317 aaPredicted RBP19.42■□□□□ 0.7
TSR3-202ENST00000566296 GRIN2DO15399 1336 aa19.42■□□□□ 0.7
TSR3-202ENST00000566296 UMODL1Q5DID0 1318 aa19.42■□□□□ 0.7
TSR3-202ENST00000566296 WDR19Q8NEZ3 1342 aa19.42■□□□□ 0.7
TSR3-202ENST00000566296 RAD50Q92878 1312 aa19.42■□□□□ 0.7
TSR3-202ENST00000566296 MFAP1P55081 439 aaKnown RBP19.41■□□□□ 0.7
TSR3-202ENST00000566296 CCL23P55773 120 aa19.41■□□□□ 0.7
TSR3-202ENST00000566296 PDE4DQ08499 809 aa19.41■□□□□ 0.7
TSR3-202ENST00000566296 ZNF543Q08ER8 600 aa19.41■□□□□ 0.7
TSR3-202ENST00000566296 PPP2R5BQ15173 497 aa19.41■□□□□ 0.7
TSR3-202ENST00000566296 AKNAD1Q5T1N1 836 aa19.41■□□□□ 0.7
TSR3-202ENST00000566296 ZNF589Q86UQ0 364 aaPredicted RBP19.41■□□□□ 0.7
TSR3-202ENST00000566296 RPUSD2Q8IZ73 545 aaKnown RBP19.41■□□□□ 0.7
TSR3-202ENST00000566296 OR6J1Q8NGC5 347 aa19.41■□□□□ 0.7
TSR3-202ENST00000566296 TTC14Q96N46 770 aa19.41■□□□□ 0.7
TSR3-202ENST00000566296 TRPV6Q9H1D0 765 aa19.41■□□□□ 0.7
TSR3-202ENST00000566296 GPHNQ9NQX3 736 aaPredicted RBP19.41■□□□□ 0.7
TSR3-202ENST00000566296 LAMA4Q16363 1823 aa19.4■□□□□ 0.7
TSR3-202ENST00000566296 MYL3P08590 195 aa19.4■□□□□ 0.7
TSR3-202ENST00000566296 SUPT20HL2P0C7V6 817 aa19.4■□□□□ 0.7
TSR3-202ENST00000566296 TMEM63BQ5T3F8 832 aa19.4■□□□□ 0.7
TSR3-202ENST00000566296 OTOP2Q7RTS6 562 aa19.4■□□□□ 0.7
TSR3-202ENST00000566296 USP38Q8NB14 1042 aa19.4■□□□□ 0.7
TSR3-202ENST00000566296 RILPL2Q969X0 211 aa19.4■□□□□ 0.7
TSR3-202ENST00000566296 LNPKQ9C0E8 428 aa19.4■□□□□ 0.7
TSR3-202ENST00000566296 WNT8AQ9H1J5 351 aa19.4■□□□□ 0.7
TSR3-202ENST00000566296 ALDH8A1Q9H2A2 487 aaPredicted RBP19.4■□□□□ 0.7
TSR3-202ENST00000566296 PRDM12Q9H4Q4 367 aa19.4■□□□□ 0.7
TSR3-202ENST00000566296 CXXC1Q9P0U4 656 aaPredicted RBP19.4■□□□□ 0.7
TSR3-202ENST00000566296 VCANP13611 3396 aa19.4■□□□□ 0.7
TSR3-202ENST00000566296 SCN10AQ9Y5Y9 1956 aa19.39■□□□□ 0.7
TSR3-202ENST00000566296 B4DLN1 442 aa19.39■□□□□ 0.69
TSR3-202ENST00000566296 NKRFO15226 690 aaKnown RBP eCLIP19.39■□□□□ 0.69
TSR3-202ENST00000566296 MRPL12P52815 198 aaKnown RBP19.39■□□□□ 0.69
TSR3-202ENST00000566296 RPS6P62753 249 aaKnown RBP19.39■□□□□ 0.69
TSR3-202ENST00000566296 TJAP1Q5JTD0 557 aa19.39■□□□□ 0.69
TSR3-202ENST00000566296 TBC1D10CQ8IV04 446 aa19.39■□□□□ 0.69
TSR3-202ENST00000566296 CLEC4DQ8WXI8 215 aa19.39■□□□□ 0.69
TSR3-202ENST00000566296 ESR2Q92731 530 aa19.39■□□□□ 0.69
TSR3-202ENST00000566296 MTG1Q9BT17 334 aaPredicted RBP19.39■□□□□ 0.69
TSR3-202ENST00000566296 NKX2-4Q9H2Z4 354 aa19.39■□□□□ 0.69
TSR3-202ENST00000566296 TNKSO95271 1327 aa19.39■□□□□ 0.69
TSR3-202ENST00000566296 PRUNE2Q8WUY3 3088 aa19.38■□□□□ 0.69
TSR3-202ENST00000566296 RBM47A0AV96 593 aaKnown RBP19.38■□□□□ 0.69
TSR3-202ENST00000566296 ZBBXA8MT70 800 aa19.38■□□□□ 0.69
TSR3-202ENST00000566296 PFKMP08237 780 aa19.38■□□□□ 0.69
TSR3-202ENST00000566296 SNHG28P0DPA3 235 aa19.38■□□□□ 0.69
TSR3-202ENST00000566296 PURAQ00577 322 aaKnown RBP19.38■□□□□ 0.69
TSR3-202ENST00000566296 FAM47CQ5HY64 1035 aa19.38■□□□□ 0.69
TSR3-202ENST00000566296 GPATCH4Q5T3I0 446 aaKnown RBP19.38■□□□□ 0.69
TSR3-202ENST00000566296 DNERQ8NFT8 737 aa19.38■□□□□ 0.69
TSR3-202ENST00000566296 SCFD2Q8WU76 684 aa19.38■□□□□ 0.69
TSR3-202ENST00000566296 SLC28A3Q9HAS3 691 aa19.38■□□□□ 0.69
TSR3-202ENST00000566296 SLC4A7Q9Y6M7 1214 aa19.38■□□□□ 0.69
TSR3-202ENST00000566296 NEFLP07196 543 aa19.37■□□□□ 0.69
TSR3-202ENST00000566296 NT5C2P49902 561 aa19.37■□□□□ 0.69
TSR3-202ENST00000566296 AAMPQ13685 434 aa19.37■□□□□ 0.69
TSR3-202ENST00000566296 PPM1EQ8WY54 764 aa19.37■□□□□ 0.69
TSR3-202ENST00000566296 SCLYQ96I15 445 aa19.37■□□□□ 0.69
TSR3-202ENST00000566296 TRMT13Q9NUP7 481 aaKnown RBP19.37■□□□□ 0.69
TSR3-202ENST00000566296 NEDD4P46934 1319 aa19.36■□□□□ 0.69
TSR3-202ENST00000566296 KPNA6O60684 536 aa19.36■□□□□ 0.69
TSR3-202ENST00000566296 CYP2C9P11712 490 aa19.36■□□□□ 0.69
TSR3-202ENST00000566296 EDNRBP24530 442 aa19.36■□□□□ 0.69
TSR3-202ENST00000566296 USH1GQ495M9 461 aa19.36■□□□□ 0.69
TSR3-202ENST00000566296 CCDC178Q5BJE1 867 aa19.36■□□□□ 0.69
TSR3-202ENST00000566296 IQCA1Q86XH1 822 aa19.36■□□□□ 0.69
TSR3-202ENST00000566296 YBX2Q9Y2T7 364 aaKnown RBP19.36■□□□□ 0.69
TSR3-202ENST00000566296 TANC1Q9C0D5 1861 aa19.36■□□□□ 0.69
TSR3-202ENST00000566296 ZNF213O14771 459 aa19.35■□□□□ 0.69
TSR3-202ENST00000566296 IGFBP4P22692 258 aa19.35■□□□□ 0.69
TSR3-202ENST00000566296 TTLL4Q14679 1199 aa19.35■□□□□ 0.69
TSR3-202ENST00000566296 PPP2R2DQ66LE6 453 aa19.35■□□□□ 0.69
TSR3-202ENST00000566296 DGKHQ86XP1 1220 aa19.35■□□□□ 0.69
TSR3-202ENST00000566296 ZKSCAN3Q9BRR0 538 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms