RNA–Protein interactions for RNA: ENST00000566104.1

TRADD-204, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 669 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-204ENST00000566104 EEPD1Q7L9B9 569 aa23.26■■□□□ 1.31
TRADD-204ENST00000566104 RGS22Q8NE09 1264 aa23.26■■□□□ 1.31
TRADD-204ENST00000566104 PURBQ96QR8 312 aaKnown RBP23.26■■□□□ 1.31
TRADD-204ENST00000566104 CPVLQ9H3G5 476 aa23.26■■□□□ 1.31
TRADD-204ENST00000566104 A0A0U1RQG5 324 aaPredicted RBP23.25■■□□□ 1.31
TRADD-204ENST00000566104 TAPT1Q6NXT6 567 aa23.25■■□□□ 1.31
TRADD-204ENST00000566104 VTI1AQ96AJ9 217 aa23.25■■□□□ 1.31
TRADD-204ENST00000566104 LRCH3Q96II8 777 aa23.25■■□□□ 1.31
TRADD-204ENST00000566104 SZT2Q5T011 3432 aa23.24■■□□□ 1.31
TRADD-204ENST00000566104 KIAA1217Q5T5P2 1943 aa23.24■■□□□ 1.31
TRADD-204ENST00000566104 E7EWF7 191 aa23.24■■□□□ 1.31
TRADD-204ENST00000566104 CABYRO75952 493 aa23.24■■□□□ 1.31
TRADD-204ENST00000566104 SMPD1P17405 629 aa23.24■■□□□ 1.31
TRADD-204ENST00000566104 PDE4DQ08499 809 aa23.24■■□□□ 1.31
TRADD-204ENST00000566104 FBXO11Q86XK2 927 aa23.24■■□□□ 1.31
TRADD-204ENST00000566104 MCF2L2Q86YR7 1114 aa23.24■■□□□ 1.31
TRADD-204ENST00000566104 MAP4K1Q92918 833 aa23.24■■□□□ 1.31
TRADD-204ENST00000566104 TRIM43BA6NCK2 446 aa23.23■■□□□ 1.31
TRADD-204ENST00000566104 IFIT3O14879 490 aaKnown RBP23.23■■□□□ 1.31
TRADD-204ENST00000566104 KIAA0355O15063 1070 aa23.23■■□□□ 1.31
TRADD-204ENST00000566104 CTAGE5O15320 804 aa23.23■■□□□ 1.31
TRADD-204ENST00000566104 RAG1P15918 1043 aa23.23■■□□□ 1.31
TRADD-204ENST00000566104 IRX5P78411 483 aaPredicted RBP23.23■■□□□ 1.31
TRADD-204ENST00000566104 FSCN1Q16658 493 aaKnown RBP23.23■■□□□ 1.31
TRADD-204ENST00000566104 QRICH1Q2TAL8 776 aa23.23■■□□□ 1.31
TRADD-204ENST00000566104 SH3RF1Q7Z6J0 888 aa23.23■■□□□ 1.31
TRADD-204ENST00000566104 BADQ92934 168 aa23.23■■□□□ 1.31
TRADD-204ENST00000566104 TRIM43Q96BQ3 446 aaPredicted RBP23.23■■□□□ 1.31
TRADD-204ENST00000566104 PDGFCQ9NRA1 345 aa23.23■■□□□ 1.31
TRADD-204ENST00000566104 TMEM39AQ9NV64 488 aa23.23■■□□□ 1.31
TRADD-204ENST00000566104 MRPL11Q9Y3B7 192 aaKnown RBP23.23■■□□□ 1.31
TRADD-204ENST00000566104 RBM8AQ9Y5S9 174 aaKnown RBP23.23■■□□□ 1.31
TRADD-204ENST00000566104 DDX49Q9Y6V7 483 aaKnown RBP23.23■■□□□ 1.31
TRADD-204ENST00000566104 KLRF2D3W0D1 207 aa23.22■■□□□ 1.31
TRADD-204ENST00000566104 EDNRBP24530 442 aa23.22■■□□□ 1.31
TRADD-204ENST00000566104 BEX3Q00994 111 aa23.22■■□□□ 1.31
TRADD-204ENST00000566104 WTAPQ15007 396 aa23.22■■□□□ 1.31
TRADD-204ENST00000566104 DUSP28Q4G0W2 176 aa23.22■■□□□ 1.31
TRADD-204ENST00000566104 JMJD4Q9H9V9 463 aa23.22■■□□□ 1.31
TRADD-204ENST00000566104 ARVCFO00192 962 aa23.21■■□□□ 1.31
TRADD-204ENST00000566104 TLR3O15455 904 aaKnown RBP23.21■■□□□ 1.31
TRADD-204ENST00000566104 DYNC1LI2O43237 492 aaPredicted RBP23.21■■□□□ 1.31
TRADD-204ENST00000566104 FAAP100Q0VG06 881 aa23.21■■□□□ 1.31
TRADD-204ENST00000566104 AMNQ9BXJ7 453 aa23.21■■□□□ 1.31
TRADD-204ENST00000566104 SEZ6LQ9BYH1 1024 aa23.21■■□□□ 1.31
TRADD-204ENST00000566104 WDR11Q9BZH6 1224 aa23.21■■□□□ 1.31
TRADD-204ENST00000566104 VAT1LQ9HCJ6 419 aa23.21■■□□□ 1.31
TRADD-204ENST00000566104 RBM47A0AV96 593 aaKnown RBP23.2■■□□□ 1.3
TRADD-204ENST00000566104 NKRFO15226 690 aaKnown RBP eCLIP23.2■■□□□ 1.3
TRADD-204ENST00000566104 CDK7P50613 346 aa23.2■■□□□ 1.3
TRADD-204ENST00000566104 TRAF1Q13077 416 aa23.2■■□□□ 1.3
TRADD-204ENST00000566104 PPP2R5BQ15173 497 aa23.2■■□□□ 1.3
TRADD-204ENST00000566104 BMP2KLQ5H9B9 411 aa23.2■■□□□ 1.3
TRADD-204ENST00000566104 STAG2Q8N3U4 1231 aa23.2■■□□□ 1.3
TRADD-204ENST00000566104 SCFD2Q8WU76 684 aa23.2■■□□□ 1.3
TRADD-204ENST00000566104 MAD2L2Q9UI95 211 aa23.2■■□□□ 1.3
TRADD-204ENST00000566104 PALM3A6NDB9 673 aaPredicted RBP23.19■■□□□ 1.3
TRADD-204ENST00000566104 CPT1AP50416 773 aa23.19■■□□□ 1.3
TRADD-204ENST00000566104 GRM4Q14833 912 aa23.19■■□□□ 1.3
TRADD-204ENST00000566104 TMEM67Q5HYA8 995 aa23.19■■□□□ 1.3
TRADD-204ENST00000566104 CXCL17Q6UXB2 119 aa23.19■■□□□ 1.3
TRADD-204ENST00000566104 ESYT1Q9BSJ8 1104 aa23.19■■□□□ 1.3
TRADD-204ENST00000566104 BAZ2BQ9UIF8 2168 aaKnown RBP23.18■■□□□ 1.3
TRADD-204ENST00000566104 ZBTB5O15062 677 aa23.18■■□□□ 1.3
TRADD-204ENST00000566104 BRDTQ58F21 947 aaPredicted RBP23.18■■□□□ 1.3
TRADD-204ENST00000566104 STOX1Q6ZVD7 989 aa23.18■■□□□ 1.3
TRADD-204ENST00000566104 CATIPQ7Z7H3 387 aa23.18■■□□□ 1.3
TRADD-204ENST00000566104 MB21D2Q8IYB1 491 aaPredicted RBP23.18■■□□□ 1.3
TRADD-204ENST00000566104 NSUN6Q8TEA1 469 aaKnown RBP23.18■■□□□ 1.3
TRADD-204ENST00000566104 MTA3Q9BTC8 594 aa23.18■■□□□ 1.3
TRADD-204ENST00000566104 FPGSQ05932 587 aa23.17■■□□□ 1.3
TRADD-204ENST00000566104 CASC1Q6TDU7 716 aa23.17■■□□□ 1.3
TRADD-204ENST00000566104 FAM126BQ8IXS8 530 aa23.17■■□□□ 1.3
TRADD-204ENST00000566104 OR6J1Q8NGC5 347 aa23.17■■□□□ 1.3
TRADD-204ENST00000566104 SYTL5Q8TDW5 730 aaPredicted RBP23.17■■□□□ 1.3
TRADD-204ENST00000566104 MTMR8Q96EF0 704 aa23.17■■□□□ 1.3
TRADD-204ENST00000566104 IWS1Q96ST2 819 aa23.17■■□□□ 1.3
TRADD-204ENST00000566104 LSG1Q9H089 658 aaKnown RBP23.17■■□□□ 1.3
TRADD-204ENST00000566104 POLR3EQ9NVU0 708 aa23.17■■□□□ 1.3
TRADD-204ENST00000566104 MAP3K20Q9NYL2 800 aaKnown RBP23.17■■□□□ 1.3
TRADD-204ENST00000566104 TBX21Q9UL17 535 aa23.17■■□□□ 1.3
TRADD-204ENST00000566104 TAF6LQ9Y6J9 622 aa23.17■■□□□ 1.3
TRADD-204ENST00000566104 ITGA7Q13683 1181 aa23.16■■□□□ 1.3
TRADD-204ENST00000566104 TTLL4Q14679 1199 aa23.16■■□□□ 1.3
TRADD-204ENST00000566104 CHST3Q7LGC8 479 aa23.16■■□□□ 1.3
TRADD-204ENST00000566104 SAMD3Q8N6K7 520 aa23.16■■□□□ 1.3
TRADD-204ENST00000566104 CFBP00751 764 aa23.15■■□□□ 1.3
TRADD-204ENST00000566104 TIMP1P01033 207 aa23.15■■□□□ 1.3
TRADD-204ENST00000566104 ITGB8P26012 769 aa23.15■■□□□ 1.3
TRADD-204ENST00000566104 ANTXR2P58335 489 aa23.15■■□□□ 1.3
TRADD-204ENST00000566104 TROAPQ12815 778 aa23.15■■□□□ 1.3
TRADD-204ENST00000566104 SHHQ15465 462 aa23.15■■□□□ 1.3
TRADD-204ENST00000566104 SLC43A3Q8NBI5 491 aa23.15■■□□□ 1.3
TRADD-204ENST00000566104 RMDN3Q96TC7 470 aa23.15■■□□□ 1.3
TRADD-204ENST00000566104 RIOX1Q9H6W3 641 aa23.15■■□□□ 1.3
TRADD-204ENST00000566104 ANO2Q9NQ90 1003 aa23.15■■□□□ 1.3
TRADD-204ENST00000566104 PCDHA1Q9Y5I3 950 aa23.15■■□□□ 1.3
TRADD-204ENST00000566104 SCN10AQ9Y5Y9 1956 aa23.14■■□□□ 1.3
TRADD-204ENST00000566104 PTGS1P23219 599 aa23.14■■□□□ 1.29
TRADD-204ENST00000566104 MCM5P33992 734 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms