RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 OPLAHO14841 1288 aa24.36■■□□□ 1.49
SHCBP1-205ENST00000566016 SLC30A10Q6XR72 485 aa24.36■■□□□ 1.49
SHCBP1-205ENST00000566016 ADD3Q9UEY8 706 aaKnown RBP24.36■■□□□ 1.49
SHCBP1-205ENST00000566016 ADD1P35611 737 aaKnown RBP24.35■■□□□ 1.49
SHCBP1-205ENST00000566016 KIF2CQ99661 725 aa24.35■■□□□ 1.49
SHCBP1-205ENST00000566016 RBM27Q9P2N5 1060 aaKnown RBP24.35■■□□□ 1.49
SHCBP1-205ENST00000566016 ASTN1O14525 1302 aa24.35■■□□□ 1.49
SHCBP1-205ENST00000566016 SOWAHBA6NEL2 793 aa24.34■■□□□ 1.49
SHCBP1-205ENST00000566016 ASB14A6NK59 587 aa24.34■■□□□ 1.49
SHCBP1-205ENST00000566016 MYCP01106 439 aaPredicted RBP24.34■■□□□ 1.49
SHCBP1-205ENST00000566016 HSD17B4P51659 736 aa24.34■■□□□ 1.49
SHCBP1-205ENST00000566016 NEK4P51957 841 aa24.34■■□□□ 1.49
SHCBP1-205ENST00000566016 AK2P54819 239 aa24.34■■□□□ 1.49
SHCBP1-205ENST00000566016 CCDC82Q8N4S0 544 aa24.34■■□□□ 1.49
SHCBP1-205ENST00000566016 IL27Q8NEV9 243 aa24.34■■□□□ 1.49
SHCBP1-205ENST00000566016 DNERQ8NFT8 737 aa24.34■■□□□ 1.49
SHCBP1-205ENST00000566016 hCG_1984214I3L0E3 225 aa24.33■■□□□ 1.49
SHCBP1-205ENST00000566016 GJA8P48165 433 aa24.33■■□□□ 1.49
SHCBP1-205ENST00000566016 NTRK3Q16288 839 aa24.33■■□□□ 1.49
SHCBP1-205ENST00000566016 ZNF713Q8N859 430 aaPredicted RBP24.33■■□□□ 1.49
SHCBP1-205ENST00000566016 MORC4Q8TE76 937 aa24.33■■□□□ 1.49
SHCBP1-205ENST00000566016 PIBF1Q8WXW3 757 aa24.33■■□□□ 1.49
SHCBP1-205ENST00000566016 BACH2Q9BYV9 841 aa24.33■■□□□ 1.49
SHCBP1-205ENST00000566016 MKI67P46013 3256 aaKnown RBP24.33■■□□□ 1.48
SHCBP1-205ENST00000566016 MSCO60682 206 aa24.32■■□□□ 1.48
SHCBP1-205ENST00000566016 IFNAR1P17181 557 aa24.32■■□□□ 1.48
SHCBP1-205ENST00000566016 CALML3P27482 149 aa24.32■■□□□ 1.48
SHCBP1-205ENST00000566016 ARMCX2Q7L311 632 aa24.32■■□□□ 1.48
SHCBP1-205ENST00000566016 TEX2Q8IWB9 1127 aa24.32■■□□□ 1.48
SHCBP1-205ENST00000566016 CNPY2Q9Y2B0 182 aa24.32■■□□□ 1.48
SHCBP1-205ENST00000566016 CCND3P30281 292 aaPredicted RBP24.32■■□□□ 1.48
SHCBP1-205ENST00000566016 ALDH5A1P51649 535 aaPredicted RBP24.32■■□□□ 1.48
SHCBP1-205ENST00000566016 SOX10P56693 466 aa24.32■■□□□ 1.48
SHCBP1-205ENST00000566016 IFFO2Q5TF58 517 aa24.32■■□□□ 1.48
SHCBP1-205ENST00000566016 TRPV1Q8NER1 839 aa24.32■■□□□ 1.48
SHCBP1-205ENST00000566016 SYTL5Q8TDW5 730 aaPredicted RBP24.32■■□□□ 1.48
SHCBP1-205ENST00000566016 TBC1D32Q96NH3 1257 aa24.32■■□□□ 1.48
SHCBP1-205ENST00000566016 ABHD16BQ9H3Z7 469 aa24.32■■□□□ 1.48
SHCBP1-205ENST00000566016 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.32■■□□□ 1.48
SHCBP1-205ENST00000566016 POTEFA5A3E0 1075 aa24.31■■□□□ 1.48
SHCBP1-205ENST00000566016 SNAI1O95863 264 aaPredicted RBP24.31■■□□□ 1.48
SHCBP1-205ENST00000566016 CFBP00751 764 aa24.31■■□□□ 1.48
SHCBP1-205ENST00000566016 PPP1R18Q6NYC8 613 aa24.31■■□□□ 1.48
SHCBP1-205ENST00000566016 U2AF1L4Q8WU68 220 aaKnown RBP24.31■■□□□ 1.48
SHCBP1-205ENST00000566016 MPHOSPH6Q99547 160 aaKnown RBP24.31■■□□□ 1.48
SHCBP1-205ENST00000566016 RNF26Q9BY78 433 aaPredicted RBP24.31■■□□□ 1.48
SHCBP1-205ENST00000566016 CRISPLD2Q9H0B8 497 aa24.31■■□□□ 1.48
SHCBP1-205ENST00000566016 NCOA5Q9HCD5 579 aaKnown RBP24.31■■□□□ 1.48
SHCBP1-205ENST00000566016 TPCN1Q9ULQ1 816 aa24.31■■□□□ 1.48
SHCBP1-205ENST00000566016 V9GY48 417 aaPredicted RBP24.31■■□□□ 1.48
SHCBP1-205ENST00000566016 hCG_1642624A0A1W2PR95 340 aa24.3■■□□□ 1.48
SHCBP1-205ENST00000566016 SEPT4O43236 478 aa24.3■■□□□ 1.48
SHCBP1-205ENST00000566016 SGPL1O95470 568 aa24.3■■□□□ 1.48
SHCBP1-205ENST00000566016 EDNRBP24530 442 aa24.3■■□□□ 1.48
SHCBP1-205ENST00000566016 CCT2P78371 535 aaKnown RBP24.3■■□□□ 1.48
SHCBP1-205ENST00000566016 TBC1D5Q92609 795 aa24.3■■□□□ 1.48
SHCBP1-205ENST00000566016 DEFB118Q96PH6 123 aa24.3■■□□□ 1.48
SHCBP1-205ENST00000566016 KIAA1217Q5T5P2 1943 aa24.3■■□□□ 1.48
SHCBP1-205ENST00000566016 B4DLN1 442 aa24.29■■□□□ 1.48
SHCBP1-205ENST00000566016 PIK3CDO00329 1044 aa24.29■■□□□ 1.48
SHCBP1-205ENST00000566016 PRPF3O43395 683 aaKnown RBP24.29■■□□□ 1.48
SHCBP1-205ENST00000566016 PFKFB2O60825 505 aa24.29■■□□□ 1.48
SHCBP1-205ENST00000566016 ZNF865P0CJ78 1059 aaPredicted RBP24.29■■□□□ 1.48
SHCBP1-205ENST00000566016 MRPL12P52815 198 aaKnown RBP24.29■■□□□ 1.48
SHCBP1-205ENST00000566016 PURBQ96QR8 312 aaKnown RBP24.29■■□□□ 1.48
SHCBP1-205ENST00000566016 LARP6Q9BRS8 491 aaKnown RBP24.29■■□□□ 1.48
SHCBP1-205ENST00000566016 KATNBL1Q9H079 304 aa24.29■■□□□ 1.48
SHCBP1-205ENST00000566016 COL20A1Q9P218 1284 aa24.29■■□□□ 1.48
SHCBP1-205ENST00000566016 DDX20Q9UHI6 824 aaKnown RBP24.29■■□□□ 1.48
SHCBP1-205ENST00000566016 GCOM1H8Y6P7 765 aaPredicted RBP24.28■■□□□ 1.48
SHCBP1-205ENST00000566016 POLR2MP0CAP2 368 aa24.28■■□□□ 1.48
SHCBP1-205ENST00000566016 RABEP1Q15276 862 aa24.28■■□□□ 1.48
SHCBP1-205ENST00000566016 PFKFB3Q16875 520 aaPredicted RBP24.28■■□□□ 1.48
SHCBP1-205ENST00000566016 WWC2Q6AWC2 1192 aa24.28■■□□□ 1.48
SHCBP1-205ENST00000566016 CPLX2Q6PUV4 134 aaKnown RBP24.28■■□□□ 1.48
SHCBP1-205ENST00000566016 HEATR3Q7Z4Q2 680 aa24.28■■□□□ 1.48
SHCBP1-205ENST00000566016 NSUN6Q8TEA1 469 aaKnown RBP24.28■■□□□ 1.48
SHCBP1-205ENST00000566016 SHISA4Q96DD7 197 aa24.28■■□□□ 1.48
SHCBP1-205ENST00000566016 SLKQ9H2G2 1235 aaPredicted RBP24.28■■□□□ 1.48
SHCBP1-205ENST00000566016 BARHL2Q9NY43 387 aa24.28■■□□□ 1.48
SHCBP1-205ENST00000566016 CPLX1O14810 134 aa24.27■■□□□ 1.48
SHCBP1-205ENST00000566016 SCG2P13521 617 aa24.27■■□□□ 1.48
SHCBP1-205ENST00000566016 ACVR2BQ13705 512 aa24.27■■□□□ 1.48
SHCBP1-205ENST00000566016 LHX8Q68G74 356 aa24.27■■□□□ 1.48
SHCBP1-205ENST00000566016 RMDN3Q96TC7 470 aa24.27■■□□□ 1.48
SHCBP1-205ENST00000566016 CAPN15O75808 1086 aa24.26■■□□□ 1.47
SHCBP1-205ENST00000566016 AKR1A1P14550 325 aa24.26■■□□□ 1.47
SHCBP1-205ENST00000566016 RGS19P49795 217 aa24.26■■□□□ 1.47
SHCBP1-205ENST00000566016 SCRN1Q12765 414 aa24.26■■□□□ 1.47
SHCBP1-205ENST00000566016 STK3Q13188 491 aa24.26■■□□□ 1.47
SHCBP1-205ENST00000566016 PRAMEF19Q5SWL8 479 aa24.26■■□□□ 1.47
SHCBP1-205ENST00000566016 GPKOWQ92917 476 aaPredicted RBP eCLIP24.26■■□□□ 1.47
SHCBP1-205ENST00000566016 PHKBQ93100 1093 aa24.26■■□□□ 1.47
SHCBP1-205ENST00000566016 IWS1Q96ST2 819 aa24.26■■□□□ 1.47
SHCBP1-205ENST00000566016 VTA1Q9NP79 307 aa24.26■■□□□ 1.47
SHCBP1-205ENST00000566016 OGDHLQ9ULD0 1010 aa24.26■■□□□ 1.47
SHCBP1-205ENST00000566016 STXBP3O00186 592 aa24.26■■□□□ 1.47
SHCBP1-205ENST00000566016 CDKL5O76039 1030 aa24.26■■□□□ 1.47
SHCBP1-205ENST00000566016 EN2P19622 333 aaPredicted RBP24.26■■□□□ 1.47
SHCBP1-205ENST00000566016 CNGA1P29973 690 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms