RNA–Protein interactions for RNA: ENST00000565626.1

NSMCE1-210, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE1, Length 259 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-210ENST00000565626 KIAA1211Q6ZU35 1233 aa12.79□□□□□ -0.36
NSMCE1-210ENST00000565626 TLK2Q86UE8 772 aa12.79□□□□□ -0.36
NSMCE1-210ENST00000565626 NUP133Q8WUM0 1156 aa12.79□□□□□ -0.36
NSMCE1-210ENST00000565626 VTI1AQ96AJ9 217 aa12.79□□□□□ -0.36
NSMCE1-210ENST00000565626 GLT1D1Q96MS3 346 aa12.79□□□□□ -0.36
NSMCE1-210ENST00000565626 JMJD4Q9H9V9 463 aa12.79□□□□□ -0.36
NSMCE1-210ENST00000565626 ADD3Q9UEY8 706 aaKnown RBP12.79□□□□□ -0.36
NSMCE1-210ENST00000565626 U3KPZ7 1027 aaPredicted RBP12.79□□□□□ -0.36
NSMCE1-210ENST00000565626 CDH23Q9H251 3354 aa12.79□□□□□ -0.36
NSMCE1-210ENST00000565626 EPHB4P54760 987 aa12.78□□□□□ -0.36
NSMCE1-210ENST00000565626 NKX3-2P78367 333 aa12.78□□□□□ -0.36
NSMCE1-210ENST00000565626 TRDNQ13061 729 aa12.78□□□□□ -0.36
NSMCE1-210ENST00000565626 COL9A3Q14050 684 aaPredicted RBP12.78□□□□□ -0.36
NSMCE1-210ENST00000565626 SHHQ15465 462 aa12.78□□□□□ -0.36
NSMCE1-210ENST00000565626 FSCN1Q16658 493 aaKnown RBP12.78□□□□□ -0.36
NSMCE1-210ENST00000565626 IQSEC1Q6DN90 963 aa12.78□□□□□ -0.36
NSMCE1-210ENST00000565626 Q7L0L9 218 aa12.78□□□□□ -0.36
NSMCE1-210ENST00000565626 ANKRD33Q7Z3H0 272 aa12.78□□□□□ -0.36
NSMCE1-210ENST00000565626 PCSK9Q8NBP7 692 aaKnown RBP12.78□□□□□ -0.36
NSMCE1-210ENST00000565626 MAP4K1Q92918 833 aa12.78□□□□□ -0.36
NSMCE1-210ENST00000565626 VTA1Q9NP79 307 aa12.78□□□□□ -0.36
NSMCE1-210ENST00000565626 TMEM39AQ9NV64 488 aa12.78□□□□□ -0.36
NSMCE1-210ENST00000565626 COL20A1Q9P218 1284 aa12.78□□□□□ -0.36
NSMCE1-210ENST00000565626 RBM8AQ9Y5S9 174 aaKnown RBP12.78□□□□□ -0.36
NSMCE1-210ENST00000565626 LRRC37A2A6NM11 1700 aa12.77□□□□□ -0.36
NSMCE1-210ENST00000565626 LTBP2Q14767 1821 aa12.77□□□□□ -0.37
NSMCE1-210ENST00000565626 IFIT3O14879 490 aaKnown RBP12.77□□□□□ -0.37
NSMCE1-210ENST00000565626 KIAA0355O15063 1070 aa12.77□□□□□ -0.37
NSMCE1-210ENST00000565626 PPP1R11O60927 126 aaPredicted RBP12.77□□□□□ -0.37
NSMCE1-210ENST00000565626 CDK7P50613 346 aa12.77□□□□□ -0.37
NSMCE1-210ENST00000565626 ANTXR2P58335 489 aa12.77□□□□□ -0.37
NSMCE1-210ENST00000565626 SYTL5Q8TDW5 730 aaPredicted RBP12.77□□□□□ -0.37
NSMCE1-210ENST00000565626 TOX2Q96NM4 488 aa12.77□□□□□ -0.37
NSMCE1-210ENST00000565626 WDR11Q9BZH6 1224 aa12.77□□□□□ -0.37
NSMCE1-210ENST00000565626 AP5M1Q9H0R1 490 aa12.77□□□□□ -0.37
NSMCE1-210ENST00000565626 GPHNQ9NQX3 736 aaPredicted RBP12.77□□□□□ -0.37
NSMCE1-210ENST00000565626 MAD2L2Q9UI95 211 aa12.77□□□□□ -0.37
NSMCE1-210ENST00000565626 PNMA2Q9UL42 364 aa12.77□□□□□ -0.37
NSMCE1-210ENST00000565626 ELP1O95163 1332 aa12.77□□□□□ -0.37
NSMCE1-210ENST00000565626 PALM3A6NDB9 673 aaPredicted RBP12.76□□□□□ -0.37
NSMCE1-210ENST00000565626 DCDC2CA8MYV0 355 aa12.76□□□□□ -0.37
NSMCE1-210ENST00000565626 KLRF2D3W0D1 207 aa12.76□□□□□ -0.37
NSMCE1-210ENST00000565626 ARVCFO00192 962 aa12.76□□□□□ -0.37
NSMCE1-210ENST00000565626 RAG1P15918 1043 aa12.76□□□□□ -0.37
NSMCE1-210ENST00000565626 EDNRBP24530 442 aa12.76□□□□□ -0.37
NSMCE1-210ENST00000565626 PSMC6P62333 389 aa12.76□□□□□ -0.37
NSMCE1-210ENST00000565626 PDE4DQ08499 809 aa12.76□□□□□ -0.37
NSMCE1-210ENST00000565626 RALYLQ86SE5 291 aaKnown RBP12.76□□□□□ -0.37
NSMCE1-210ENST00000565626 FBXO11Q86XK2 927 aa12.76□□□□□ -0.37
NSMCE1-210ENST00000565626 MB21D2Q8IYB1 491 aaPredicted RBP12.76□□□□□ -0.37
NSMCE1-210ENST00000565626 NCOA7Q8NI08 942 aa12.76□□□□□ -0.37
NSMCE1-210ENST00000565626 COPS5Q92905 334 aa12.76□□□□□ -0.37
NSMCE1-210ENST00000565626 TAAR1Q96RJ0 339 aa12.76□□□□□ -0.37
NSMCE1-210ENST00000565626 LSG1Q9H089 658 aaKnown RBP12.76□□□□□ -0.37
NSMCE1-210ENST00000565626 TBX21Q9UL17 535 aa12.76□□□□□ -0.37
NSMCE1-210ENST00000565626 GRIN2DO15399 1336 aa12.76□□□□□ -0.37
NSMCE1-210ENST00000565626 ABCB11O95342 1321 aa12.76□□□□□ -0.37
NSMCE1-210ENST00000565626 A0A0U1RQG5 324 aaPredicted RBP12.75□□□□□ -0.37
NSMCE1-210ENST00000565626 RBM47A0AV96 593 aaKnown RBP12.75□□□□□ -0.37
NSMCE1-210ENST00000565626 OPLAHO14841 1288 aa12.75□□□□□ -0.37
NSMCE1-210ENST00000565626 ARIH2O95376 493 aa12.75□□□□□ -0.37
NSMCE1-210ENST00000565626 GRM4Q14833 912 aa12.75□□□□□ -0.37
NSMCE1-210ENST00000565626 DUSP28Q4G0W2 176 aa12.75□□□□□ -0.37
NSMCE1-210ENST00000565626 HOMER1Q86YM7 354 aa12.75□□□□□ -0.37
NSMCE1-210ENST00000565626 FAM126BQ8IXS8 530 aa12.75□□□□□ -0.37
NSMCE1-210ENST00000565626 DEFB123Q8N688 67 aa12.75□□□□□ -0.37
NSMCE1-210ENST00000565626 RGS22Q8NE09 1264 aa12.75□□□□□ -0.37
NSMCE1-210ENST00000565626 DNERQ8NFT8 737 aa12.75□□□□□ -0.37
NSMCE1-210ENST00000565626 PPP1R13LQ8WUF5 828 aa12.75□□□□□ -0.37
NSMCE1-210ENST00000565626 ESYT1Q9BSJ8 1104 aa12.75□□□□□ -0.37
NSMCE1-210ENST00000565626 BAZ2BQ9UIF8 2168 aaKnown RBP12.74□□□□□ -0.37
NSMCE1-210ENST00000565626 CYTH3O43739 400 aa12.74□□□□□ -0.37
NSMCE1-210ENST00000565626 TROAPQ12815 778 aa12.74□□□□□ -0.37
NSMCE1-210ENST00000565626 WTAPQ15007 396 aa12.74□□□□□ -0.37
NSMCE1-210ENST00000565626 TMEM67Q5HYA8 995 aa12.74□□□□□ -0.37
NSMCE1-210ENST00000565626 CENPQQ7L2Z9 268 aaPredicted RBP12.74□□□□□ -0.37
NSMCE1-210ENST00000565626 OR6J1Q8NGC5 347 aa12.74□□□□□ -0.37
NSMCE1-210ENST00000565626 IGDCC4Q8TDY8 1250 aa12.74□□□□□ -0.37
NSMCE1-210ENST00000565626 PIBF1Q8WXW3 757 aa12.74□□□□□ -0.37
NSMCE1-210ENST00000565626 MTMR8Q96EF0 704 aa12.74□□□□□ -0.37
NSMCE1-210ENST00000565626 PIGSQ96S52 555 aa12.74□□□□□ -0.37
NSMCE1-210ENST00000565626 MYL10Q9BUA6 226 aa12.74□□□□□ -0.37
NSMCE1-210ENST00000565626 MRPL11Q9Y3B7 192 aaKnown RBP12.74□□□□□ -0.37
NSMCE1-210ENST00000565626 Q9Y3F1 56 aa12.74□□□□□ -0.37
NSMCE1-210ENST00000565626 LOC102724159A0A0B4J2E5 919 aa12.73□□□□□ -0.37
NSMCE1-210ENST00000565626 ERICH2A1L162 156 aa12.73□□□□□ -0.37
NSMCE1-210ENST00000565626 SLC27A2O14975 620 aa12.73□□□□□ -0.37
NSMCE1-210ENST00000565626 ZBTB5O15062 677 aa12.73□□□□□ -0.37
NSMCE1-210ENST00000565626 CFBP00751 764 aa12.73□□□□□ -0.37
NSMCE1-210ENST00000565626 TIMP1P01033 207 aa12.73□□□□□ -0.37
NSMCE1-210ENST00000565626 CD4P01730 458 aa12.73□□□□□ -0.37
NSMCE1-210ENST00000565626 MYL3P08590 195 aa12.73□□□□□ -0.37
NSMCE1-210ENST00000565626 ITGA7Q13683 1181 aa12.73□□□□□ -0.37
NSMCE1-210ENST00000565626 PPP2R5BQ15173 497 aa12.73□□□□□ -0.37
NSMCE1-210ENST00000565626 PWP2Q15269 919 aaKnown RBP12.73□□□□□ -0.37
NSMCE1-210ENST00000565626 SEPT14Q6ZU15 432 aa12.73□□□□□ -0.37
NSMCE1-210ENST00000565626 MCF2L2Q86YR7 1114 aa12.73□□□□□ -0.37
NSMCE1-210ENST00000565626 SLC43A3Q8NBI5 491 aa12.73□□□□□ -0.37
NSMCE1-210ENST00000565626 SCFD2Q8WU76 684 aa12.73□□□□□ -0.37
NSMCE1-210ENST00000565626 RMDN3Q96TC7 470 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms