RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 BMP15O95972 392 aa21.8■■□□□ 1.08
CSPG4P13-201ENST00000565545 LINC00301Q8NCQ3 95 aa21.8■■□□□ 1.08
CSPG4P13-201ENST00000565545 PPP1R9AQ9ULJ8 1098 aa21.8■■□□□ 1.08
CSPG4P13-201ENST00000565545 DDX49Q9Y6V7 483 aaKnown RBP21.8■■□□□ 1.08
CSPG4P13-201ENST00000565545 MORC2Q9Y6X9 1032 aaPredicted RBP21.8■■□□□ 1.08
CSPG4P13-201ENST00000565545 MYPNQ86TC9 1320 aa21.8■■□□□ 1.08
CSPG4P13-201ENST00000565545 FLOT1O75955 427 aa21.79■■□□□ 1.08
CSPG4P13-201ENST00000565545 TOB1P50616 345 aaPredicted RBP21.79■■□□□ 1.08
CSPG4P13-201ENST00000565545 PRMT2P55345 433 aa21.79■■□□□ 1.08
CSPG4P13-201ENST00000565545 CEBPZQ03701 1054 aaKnown RBP21.79■■□□□ 1.08
CSPG4P13-201ENST00000565545 SLC39A14Q15043 492 aa21.79■■□□□ 1.08
CSPG4P13-201ENST00000565545 SF3A1Q15459 793 aaKnown RBP21.79■■□□□ 1.08
CSPG4P13-201ENST00000565545 KLHL40Q2TBA0 621 aa21.79■■□□□ 1.08
CSPG4P13-201ENST00000565545 PIK3AP1Q6ZUJ8 805 aa21.79■■□□□ 1.08
CSPG4P13-201ENST00000565545 ANP32EQ9BTT0 268 aa21.79■■□□□ 1.08
CSPG4P13-201ENST00000565545 PSTPIP2Q9H939 334 aa21.79■■□□□ 1.08
CSPG4P13-201ENST00000565545 FBXO28Q9NVF7 368 aa21.79■■□□□ 1.08
CSPG4P13-201ENST00000565545 CPA4Q9UI42 421 aa21.79■■□□□ 1.08
CSPG4P13-201ENST00000565545 KCNH4Q9UQ05 1017 aa21.79■■□□□ 1.08
CSPG4P13-201ENST00000565545 CLIC4Q9Y696 253 aa21.79■■□□□ 1.08
CSPG4P13-201ENST00000565545 GOLGA6L4A6NEF3 574 aa21.78■■□□□ 1.08
CSPG4P13-201ENST00000565545 USP17L15C9J2P7 530 aa21.78■■□□□ 1.08
CSPG4P13-201ENST00000565545 USP17L13C9JLJ4 530 aa21.78■■□□□ 1.08
CSPG4P13-201ENST00000565545 USP17L11C9JVI0 530 aa21.78■■□□□ 1.08
CSPG4P13-201ENST00000565545 USP17L18D6R9N7 530 aa21.78■■□□□ 1.08
CSPG4P13-201ENST00000565545 USP17L22D6RA61 530 aa21.78■■□□□ 1.08
CSPG4P13-201ENST00000565545 USP17L17D6RBQ6 530 aa21.78■■□□□ 1.08
CSPG4P13-201ENST00000565545 USP17L19D6RCP7 530 aa21.78■■□□□ 1.08
CSPG4P13-201ENST00000565545 USP17L20D6RJB6 530 aa21.78■■□□□ 1.08
CSPG4P13-201ENST00000565545 SPTLC2O15270 562 aa21.78■■□□□ 1.08
CSPG4P13-201ENST00000565545 PPP6R2O75170 966 aa21.78■■□□□ 1.08
CSPG4P13-201ENST00000565545 USP17L24Q0WX57 530 aa21.78■■□□□ 1.08
CSPG4P13-201ENST00000565545 CATSPERGQ6ZRH7 1159 aa21.78■■□□□ 1.08
CSPG4P13-201ENST00000565545 PROCA1Q8NCQ7 364 aaPredicted RBP21.78■■□□□ 1.08
CSPG4P13-201ENST00000565545 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.78■■□□□ 1.08
CSPG4P13-201ENST00000565545 LOC285556D6RIA3 1793 aa21.78■■□□□ 1.08
CSPG4P13-201ENST00000565545 ABCB11O95342 1321 aa21.78■■□□□ 1.08
CSPG4P13-201ENST00000565545 A0A0G2JLL6 359 aaPredicted RBP21.77■■□□□ 1.08
CSPG4P13-201ENST00000565545 ZBED4O75132 1171 aa21.77■■□□□ 1.08
CSPG4P13-201ENST00000565545 ICAM1P05362 532 aa21.77■■□□□ 1.08
CSPG4P13-201ENST00000565545 HOXD10P28358 340 aa21.77■■□□□ 1.08
CSPG4P13-201ENST00000565545 COG2Q14746 738 aa21.77■■□□□ 1.08
CSPG4P13-201ENST00000565545 NONOQ15233 471 aaKnown RBP eCLIP21.77■■□□□ 1.08
CSPG4P13-201ENST00000565545 EARS2Q5JPH6 523 aaKnown RBP21.77■■□□□ 1.08
CSPG4P13-201ENST00000565545 PRRT2Q7Z6L0 340 aaPredicted RBP21.77■■□□□ 1.08
CSPG4P13-201ENST00000565545 FTOQ9C0B1 505 aaKnown RBP eCLIP21.77■■□□□ 1.08
CSPG4P13-201ENST00000565545 SLC38A10Q9HBR0 1119 aa21.77■■□□□ 1.08
CSPG4P13-201ENST00000565545 COLQQ9Y215 455 aaPredicted RBP21.77■■□□□ 1.08
CSPG4P13-201ENST00000565545 MRPL11Q9Y3B7 192 aaKnown RBP21.77■■□□□ 1.08
CSPG4P13-201ENST00000565545 RLFQ13129 1914 aa21.76■■□□□ 1.07
CSPG4P13-201ENST00000565545 PDHXO00330 501 aa21.76■■□□□ 1.07
CSPG4P13-201ENST00000565545 GADD45BO75293 160 aaPredicted RBP21.76■■□□□ 1.07
CSPG4P13-201ENST00000565545 DSG3P32926 999 aa21.76■■□□□ 1.07
CSPG4P13-201ENST00000565545 PSMC4P43686 418 aa21.76■■□□□ 1.07
CSPG4P13-201ENST00000565545 CLK2P49760 499 aaKnown RBP21.76■■□□□ 1.07
CSPG4P13-201ENST00000565545 SNAP25P60880 206 aa21.76■■□□□ 1.07
CSPG4P13-201ENST00000565545 PTPAQ15257 358 aa21.76■■□□□ 1.07
CSPG4P13-201ENST00000565545 TTC38Q5R3I4 469 aa21.76■■□□□ 1.07
CSPG4P13-201ENST00000565545 C17orf99Q6UX52 265 aa21.76■■□□□ 1.07
CSPG4P13-201ENST00000565545 ANKRD23Q86SG2 305 aa21.76■■□□□ 1.07
CSPG4P13-201ENST00000565545 HOXC10Q9NYD6 342 aa21.76■■□□□ 1.07
CSPG4P13-201ENST00000565545 CTDP1Q9Y5B0 961 aaPredicted RBP21.76■■□□□ 1.07
CSPG4P13-201ENST00000565545 FXR1P51114 621 aaKnown RBP eCLIP21.75■■□□□ 1.07
CSPG4P13-201ENST00000565545 OAZ1P54368 228 aa21.75■■□□□ 1.07
CSPG4P13-201ENST00000565545 AP3B2Q13367 1082 aa21.75■■□□□ 1.07
CSPG4P13-201ENST00000565545 ORC2Q13416 577 aaPredicted RBP21.75■■□□□ 1.07
CSPG4P13-201ENST00000565545 USH1GQ495M9 461 aa21.75■■□□□ 1.07
CSPG4P13-201ENST00000565545 CCDC174Q6PII3 467 aa21.75■■□□□ 1.07
CSPG4P13-201ENST00000565545 FASTKD5Q7L8L6 764 aaKnown RBP21.75■■□□□ 1.07
CSPG4P13-201ENST00000565545 RAET1EQ8TD07 263 aa21.75■■□□□ 1.07
CSPG4P13-201ENST00000565545 RASGRP4Q8TDF6 673 aa21.75■■□□□ 1.07
CSPG4P13-201ENST00000565545 BIN2Q9UBW5 565 aaPredicted RBP21.75■■□□□ 1.07
CSPG4P13-201ENST00000565545 ADAMTS5Q9UNA0 930 aa21.75■■□□□ 1.07
CSPG4P13-201ENST00000565545 RBBP6Q7Z6E9 1792 aaKnown RBP21.74■■□□□ 1.07
CSPG4P13-201ENST00000565545 MKI67P46013 3256 aaKnown RBP21.74■■□□□ 1.07
CSPG4P13-201ENST00000565545 FAM205CA6NFA0 338 aa21.74■■□□□ 1.07
CSPG4P13-201ENST00000565545 H0YGN5 161 aa21.74■■□□□ 1.07
CSPG4P13-201ENST00000565545 PIK3CDO00329 1044 aa21.74■■□□□ 1.07
CSPG4P13-201ENST00000565545 ADAMTS3O15072 1205 aa21.74■■□□□ 1.07
CSPG4P13-201ENST00000565545 FOSP01100 380 aaPredicted RBP21.74■■□□□ 1.07
CSPG4P13-201ENST00000565545 HOXA7P31268 230 aaPredicted RBP21.74■■□□□ 1.07
CSPG4P13-201ENST00000565545 ME1P48163 572 aa21.74■■□□□ 1.07
CSPG4P13-201ENST00000565545 ADALQ6DHV7 355 aa21.74■■□□□ 1.07
CSPG4P13-201ENST00000565545 SAMD3Q8N6K7 520 aa21.74■■□□□ 1.07
CSPG4P13-201ENST00000565545 GPT2Q8TD30 523 aa21.74■■□□□ 1.07
CSPG4P13-201ENST00000565545 PGBD1Q96JS3 809 aa21.74■■□□□ 1.07
CSPG4P13-201ENST00000565545 SRRDQ9UH36 339 aa21.74■■□□□ 1.07
CSPG4P13-201ENST00000565545 PCDHB6Q9Y5E3 794 aa21.74■■□□□ 1.07
CSPG4P13-201ENST00000565545 A0A1W2PQ27 194 aa21.73■■□□□ 1.07
CSPG4P13-201ENST00000565545 A0A1W2PQ64 194 aa21.73■■□□□ 1.07
CSPG4P13-201ENST00000565545 A0A1W2PQD8 194 aa21.73■■□□□ 1.07
CSPG4P13-201ENST00000565545 VWA5AO00534 786 aa21.73■■□□□ 1.07
CSPG4P13-201ENST00000565545 JAKMIP3Q5VZ66 844 aa21.73■■□□□ 1.07
CSPG4P13-201ENST00000565545 DPF3Q92784 378 aa21.73■■□□□ 1.07
CSPG4P13-201ENST00000565545 TRIM47Q96LD4 638 aa21.73■■□□□ 1.07
CSPG4P13-201ENST00000565545 CCPG1Q9ULG6 757 aa21.73■■□□□ 1.07
CSPG4P13-201ENST00000565545 PCDHA7Q9UN72 937 aa21.73■■□□□ 1.07
CSPG4P13-201ENST00000565545 ZNF536O15090 1300 aa21.73■■□□□ 1.07
CSPG4P13-201ENST00000565545 CENPFP49454 3210 aa21.72■■□□□ 1.07
CSPG4P13-201ENST00000565545 ATP2B1P20020 1258 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms