RNA–Protein interactions for RNA: ENST00000565517.5

COMMD4-212, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-212ENST00000565517 PIGSQ96S52 555 aa17.9■□□□□ 0.46
COMMD4-212ENST00000565517 MPHOSPH6Q99547 160 aaKnown RBP17.9■□□□□ 0.46
COMMD4-212ENST00000565517 ZHX1Q9UKY1 873 aaPredicted RBP17.9■□□□□ 0.46
COMMD4-212ENST00000565517 PCDHA1Q9Y5I3 950 aa17.9■□□□□ 0.46
COMMD4-212ENST00000565517 LRRC37A2A6NM11 1700 aa17.89■□□□□ 0.46
COMMD4-212ENST00000565517 B4DLN1 442 aa17.89■□□□□ 0.45
COMMD4-212ENST00000565517 PPP1R11O60927 126 aaPredicted RBP17.89■□□□□ 0.45
COMMD4-212ENST00000565517 DUSP11O75319 330 aaKnown RBP17.89■□□□□ 0.45
COMMD4-212ENST00000565517 MRPL12P52815 198 aaKnown RBP17.89■□□□□ 0.45
COMMD4-212ENST00000565517 RCAN1P53805 252 aa17.89■□□□□ 0.45
COMMD4-212ENST00000565517 CCDC144BQ3MJ40 725 aa17.89■□□□□ 0.45
COMMD4-212ENST00000565517 ANO1Q5XXA6 986 aa17.89■□□□□ 0.45
COMMD4-212ENST00000565517 HOMER1Q86YM7 354 aa17.89■□□□□ 0.45
COMMD4-212ENST00000565517 TCEANC2Q96MN5 208 aa17.89■□□□□ 0.45
COMMD4-212ENST00000565517 PURBQ96QR8 312 aaKnown RBP17.89■□□□□ 0.45
COMMD4-212ENST00000565517 XPNPEP3Q9NQH7 507 aa17.89■□□□□ 0.45
COMMD4-212ENST00000565517 RPS6KB1P23443 525 aa17.88■□□□□ 0.45
COMMD4-212ENST00000565517 PRPF38BQ5VTL8 546 aaKnown RBP17.88■□□□□ 0.45
COMMD4-212ENST00000565517 SRBD1Q8N5C6 995 aaKnown RBP17.88■□□□□ 0.45
COMMD4-212ENST00000565517 TBC1D5Q92609 795 aa17.88■□□□□ 0.45
COMMD4-212ENST00000565517 DPF3Q92784 378 aa17.88■□□□□ 0.45
COMMD4-212ENST00000565517 RRP36Q96EU6 259 aaKnown RBP17.88■□□□□ 0.45
COMMD4-212ENST00000565517 VTA1Q9NP79 307 aa17.88■□□□□ 0.45
COMMD4-212ENST00000565517 RBM28Q9NW13 759 aaKnown RBP17.88■□□□□ 0.45
COMMD4-212ENST00000565517 BRPF3Q9ULD4 1205 aa17.88■□□□□ 0.45
COMMD4-212ENST00000565517 KBTBD13C9JR72 458 aa17.87■□□□□ 0.45
COMMD4-212ENST00000565517 OPLAHO14841 1288 aa17.87■□□□□ 0.45
COMMD4-212ENST00000565517 ZBTB43O43298 467 aa17.87■□□□□ 0.45
COMMD4-212ENST00000565517 RXRAP19793 462 aa17.87■□□□□ 0.45
COMMD4-212ENST00000565517 EDNRBP24530 442 aa17.87■□□□□ 0.45
COMMD4-212ENST00000565517 HSD17B4P51659 736 aa17.87■□□□□ 0.45
COMMD4-212ENST00000565517 FGD1P98174 961 aa17.87■□□□□ 0.45
COMMD4-212ENST00000565517 PPP2R5BQ15173 497 aa17.87■□□□□ 0.45
COMMD4-212ENST00000565517 LRRC41Q15345 812 aa17.87■□□□□ 0.45
COMMD4-212ENST00000565517 GJC2Q5T442 439 aaPredicted RBP17.87■□□□□ 0.45
COMMD4-212ENST00000565517 IQSEC1Q6DN90 963 aa17.87■□□□□ 0.45
COMMD4-212ENST00000565517 RNF180Q86T96 592 aa17.87■□□□□ 0.45
COMMD4-212ENST00000565517 MICU3Q86XE3 530 aa17.87■□□□□ 0.45
COMMD4-212ENST00000565517 SYTL5Q8TDW5 730 aaPredicted RBP17.87■□□□□ 0.45
COMMD4-212ENST00000565517 AGXT2Q9BYV1 514 aa17.87■□□□□ 0.45
COMMD4-212ENST00000565517 TM6SF1Q9BZW5 370 aa17.87■□□□□ 0.45
COMMD4-212ENST00000565517 PLEKHA8P1O95397 391 aa17.86■□□□□ 0.45
COMMD4-212ENST00000565517 CPA1P15085 419 aa17.86■□□□□ 0.45
COMMD4-212ENST00000565517 CASTP20810 708 aaKnown RBP17.86■□□□□ 0.45
COMMD4-212ENST00000565517 TAPT1Q6NXT6 567 aa17.86■□□□□ 0.45
COMMD4-212ENST00000565517 Q6ZUG5 572 aa17.86■□□□□ 0.45
COMMD4-212ENST00000565517 TMTC3Q6ZXV5 915 aa17.86■□□□□ 0.45
COMMD4-212ENST00000565517 NSUN6Q8TEA1 469 aaKnown RBP17.86■□□□□ 0.45
COMMD4-212ENST00000565517 ZSWIM6Q9HCJ5 1215 aa17.86■□□□□ 0.45
COMMD4-212ENST00000565517 SEC63Q9UGP8 760 aaKnown RBP17.86■□□□□ 0.45
COMMD4-212ENST00000565517 KIAA1217Q5T5P2 1943 aa17.86■□□□□ 0.45
COMMD4-212ENST00000565517 KLF18A0A0U1RQI7 1052 aa17.85■□□□□ 0.45
COMMD4-212ENST00000565517 ADAMTS4O75173 837 aa17.85■□□□□ 0.45
COMMD4-212ENST00000565517 CFBP00751 764 aa17.85■□□□□ 0.45
COMMD4-212ENST00000565517 NKX3-2P78367 333 aa17.85■□□□□ 0.45
COMMD4-212ENST00000565517 TNFAIP2Q03169 654 aa17.85■□□□□ 0.45
COMMD4-212ENST00000565517 RUFY3Q7L099 469 aa17.85■□□□□ 0.45
COMMD4-212ENST00000565517 KLHDC9Q8NEP7 349 aa17.85■□□□□ 0.45
COMMD4-212ENST00000565517 TAAR1Q96RJ0 339 aa17.85■□□□□ 0.45
COMMD4-212ENST00000565517 IWS1Q96ST2 819 aa17.85■□□□□ 0.45
COMMD4-212ENST00000565517 TSEN34Q9BSV6 310 aaKnown RBP17.85■□□□□ 0.45
COMMD4-212ENST00000565517 SENP6Q9GZR1 1112 aaPredicted RBP17.85■□□□□ 0.45
COMMD4-212ENST00000565517 UPF3AQ9H1J1 476 aaKnown RBP17.85■□□□□ 0.45
COMMD4-212ENST00000565517 SPC25Q9HBM1 224 aa17.85■□□□□ 0.45
COMMD4-212ENST00000565517 COL20A1Q9P218 1284 aa17.85■□□□□ 0.45
COMMD4-212ENST00000565517 Q9Y3F1 56 aa17.85■□□□□ 0.45
COMMD4-212ENST00000565517 NR2E3Q9Y5X4 410 aa17.85■□□□□ 0.45
COMMD4-212ENST00000565517 SYNRGQ9UMZ2 1314 aa17.84■□□□□ 0.45
COMMD4-212ENST00000565517 RBM47A0AV96 593 aaKnown RBP17.84■□□□□ 0.45
COMMD4-212ENST00000565517 ADCY6O43306 1168 aa17.84■□□□□ 0.45
COMMD4-212ENST00000565517 EVI5O60447 810 aa17.84■□□□□ 0.45
COMMD4-212ENST00000565517 PGK1P00558 417 aa17.84■□□□□ 0.45
COMMD4-212ENST00000565517 CST5P28325 142 aaPredicted RBP17.84■□□□□ 0.45
COMMD4-212ENST00000565517 GJA9P57773 515 aa17.84■□□□□ 0.45
COMMD4-212ENST00000565517 PDE4DQ08499 809 aa17.84■□□□□ 0.45
COMMD4-212ENST00000565517 RTN1Q16799 776 aa17.84■□□□□ 0.45
COMMD4-212ENST00000565517 RAB11FIP4Q86YS3 637 aa17.84■□□□□ 0.45
COMMD4-212ENST00000565517 FBXO16Q8IX29 292 aaPredicted RBP17.84■□□□□ 0.45
COMMD4-212ENST00000565517 RMDN3Q96TC7 470 aa17.84■□□□□ 0.45
COMMD4-212ENST00000565517 PHF24Q9UPV7 400 aa17.84■□□□□ 0.45
COMMD4-212ENST00000565517 GNEQ9Y223 722 aaKnown RBP17.84■□□□□ 0.45
COMMD4-212ENST00000565517 DDX49Q9Y6V7 483 aaKnown RBP17.84■□□□□ 0.45
COMMD4-212ENST00000565517 CCDC196A0A1B0GTZ2 297 aa17.83■□□□□ 0.44
COMMD4-212ENST00000565517 GCOM1H8Y6P7 765 aaPredicted RBP17.83■□□□□ 0.44
COMMD4-212ENST00000565517 POLR2MP0CAP2 368 aa17.83■□□□□ 0.44
COMMD4-212ENST00000565517 ADCYAP1R1P41586 468 aa17.83■□□□□ 0.44
COMMD4-212ENST00000565517 EVCP57679 992 aa17.83■□□□□ 0.44
COMMD4-212ENST00000565517 CCSAPQ6IQ19 270 aaPredicted RBP17.83■□□□□ 0.44
COMMD4-212ENST00000565517 EEPD1Q7L9B9 569 aa17.83■□□□□ 0.44
COMMD4-212ENST00000565517 CMTR1Q8N1G2 835 aaKnown RBP17.83■□□□□ 0.44
COMMD4-212ENST00000565517 PIBF1Q8WXW3 757 aa17.83■□□□□ 0.44
COMMD4-212ENST00000565517 BRF1Q92994 677 aa17.83■□□□□ 0.44
COMMD4-212ENST00000565517 LENG1Q96BZ8 264 aaPredicted RBP17.83■□□□□ 0.44
COMMD4-212ENST00000565517 PDGFCQ9NRA1 345 aa17.83■□□□□ 0.44
COMMD4-212ENST00000565517 CYP46A1Q9Y6A2 500 aa17.83■□□□□ 0.44
COMMD4-212ENST00000565517 NID2Q14112 1375 aa17.82■□□□□ 0.44
COMMD4-212ENST00000565517 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.82■□□□□ 0.44
COMMD4-212ENST00000565517 MOXD2PA6NHM9 499 aa17.82■□□□□ 0.44
COMMD4-212ENST00000565517 GOLGA8AA7E2F4 631 aa17.82■□□□□ 0.44
COMMD4-212ENST00000565517 GOLGA8BA8MQT2 603 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms