RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 DUSP28Q4G0W2 176 aa10.85□□□□□ -0.67
VPS9D1-205ENST00000565452 TCEAL5Q5H9L2 206 aa10.85□□□□□ -0.67
VPS9D1-205ENST00000565452 C12orf60Q5U649 245 aa10.85□□□□□ -0.67
VPS9D1-205ENST00000565452 CAGE1Q8TC20 777 aa10.85□□□□□ -0.67
VPS9D1-205ENST00000565452 DDRGK1Q96HY6 314 aa10.85□□□□□ -0.67
VPS9D1-205ENST00000565452 C17orf80Q9BSJ5 609 aa10.85□□□□□ -0.67
VPS9D1-205ENST00000565452 CCDC8Q9H0W5 538 aaPredicted RBP10.85□□□□□ -0.67
VPS9D1-205ENST00000565452 VTA1Q9NP79 307 aa10.85□□□□□ -0.67
VPS9D1-205ENST00000565452 HOMER2Q9NSB8 354 aa10.85□□□□□ -0.67
VPS9D1-205ENST00000565452 SPTBN4Q9H254 2564 aa10.84□□□□□ -0.67
VPS9D1-205ENST00000565452 A0A0G2JMZ2 1700 aa10.84□□□□□ -0.67
VPS9D1-205ENST00000565452 PROB1E7EW31 1015 aa10.84□□□□□ -0.67
VPS9D1-205ENST00000565452 STXBP3O00186 592 aa10.84□□□□□ -0.67
VPS9D1-205ENST00000565452 SURF6O75683 361 aaKnown RBP10.84□□□□□ -0.67
VPS9D1-205ENST00000565452 SELPP16109 830 aa10.84□□□□□ -0.67
VPS9D1-205ENST00000565452 PTGS1P23219 599 aa10.84□□□□□ -0.67
VPS9D1-205ENST00000565452 NUBP1P53384 320 aa10.84□□□□□ -0.67
VPS9D1-205ENST00000565452 GPM6BQ13491 265 aa10.84□□□□□ -0.67
VPS9D1-205ENST00000565452 COL19A1Q14993 1142 aa10.84□□□□□ -0.67
VPS9D1-205ENST00000565452 PTGISQ16647 500 aa10.84□□□□□ -0.67
VPS9D1-205ENST00000565452 TKFCQ3LXA3 575 aa10.84□□□□□ -0.67
VPS9D1-205ENST00000565452 FAM117BQ6P1L5 589 aa10.84□□□□□ -0.67
VPS9D1-205ENST00000565452 C16orf86Q6ZW13 317 aa10.84□□□□□ -0.67
VPS9D1-205ENST00000565452 WDR11Q9BZH6 1224 aa10.84□□□□□ -0.67
VPS9D1-205ENST00000565452 NSUN3Q9H649 340 aaKnown RBP10.84□□□□□ -0.67
VPS9D1-205ENST00000565452 NYAP2Q9P242 653 aa10.84□□□□□ -0.67
VPS9D1-205ENST00000565452 DBNLQ9UJU6 430 aaKnown RBP10.84□□□□□ -0.67
VPS9D1-205ENST00000565452 TRPC6Q9Y210 931 aa10.84□□□□□ -0.67
VPS9D1-205ENST00000565452 H3BNC9 293 aa10.83□□□□□ -0.68
VPS9D1-205ENST00000565452 NDUFB10O96000 172 aa10.83□□□□□ -0.68
VPS9D1-205ENST00000565452 CXCL10P02778 98 aa10.83□□□□□ -0.68
VPS9D1-205ENST00000565452 ZXDAP98168 799 aa10.83□□□□□ -0.68
VPS9D1-205ENST00000565452 HNRNPUQ00839 825 aaKnown RBP eCLIP10.83□□□□□ -0.68
VPS9D1-205ENST00000565452 EPC2Q52LR7 807 aa10.83□□□□□ -0.68
VPS9D1-205ENST00000565452 TMEM63BQ5T3F8 832 aa10.83□□□□□ -0.68
VPS9D1-205ENST00000565452 FBXO16Q8IX29 292 aaPredicted RBP10.83□□□□□ -0.68
VPS9D1-205ENST00000565452 OR6J1Q8NGC5 347 aa10.83□□□□□ -0.68
VPS9D1-205ENST00000565452 ARHGAP45Q92619 1136 aa10.83□□□□□ -0.68
VPS9D1-205ENST00000565452 TRERF1Q96PN7 1200 aa10.83□□□□□ -0.68
VPS9D1-205ENST00000565452 A1CFQ9NQ94 594 aaKnown RBP10.83□□□□□ -0.68
VPS9D1-205ENST00000565452 CLIP2Q9UDT6 1046 aa10.83□□□□□ -0.68
VPS9D1-205ENST00000565452 MYH1P12882 1939 aa10.83□□□□□ -0.68
VPS9D1-205ENST00000565452 CDK5RAP2Q96SN8 1893 aa10.83□□□□□ -0.68
VPS9D1-205ENST00000565452 RAD50Q92878 1312 aa10.83□□□□□ -0.68
VPS9D1-205ENST00000565452 MBTPS2O43462 519 aa10.82□□□□□ -0.68
VPS9D1-205ENST00000565452 PDE6AP16499 860 aa10.82□□□□□ -0.68
VPS9D1-205ENST00000565452 AVPR2P30518 371 aa10.82□□□□□ -0.68
VPS9D1-205ENST00000565452 LRRC8DQ7L1W4 858 aa10.82□□□□□ -0.68
VPS9D1-205ENST00000565452 LCORLQ8N3X6 602 aa10.82□□□□□ -0.68
VPS9D1-205ENST00000565452 CHURC1Q8WUH1 139 aa10.82□□□□□ -0.68
VPS9D1-205ENST00000565452 EAF2Q96CJ1 260 aaPredicted RBP10.82□□□□□ -0.68
VPS9D1-205ENST00000565452 RNF146Q9NTX7 359 aa10.82□□□□□ -0.68
VPS9D1-205ENST00000565452 ZBED9Q6R2W3 1325 aa10.82□□□□□ -0.68
VPS9D1-205ENST00000565452 ZNF532Q9HCE3 1301 aa10.82□□□□□ -0.68
VPS9D1-205ENST00000565452 CYP2D7A0A087X1C5 515 aa10.81□□□□□ -0.68
VPS9D1-205ENST00000565452 A6NJR5 290 aa10.81□□□□□ -0.68
VPS9D1-205ENST00000565452 H0Y858 1186 aa10.81□□□□□ -0.68
VPS9D1-205ENST00000565452 NKRFO15226 690 aaKnown RBP eCLIP10.81□□□□□ -0.68
VPS9D1-205ENST00000565452 PRKAB2O43741 272 aa10.81□□□□□ -0.68
VPS9D1-205ENST00000565452 AMHP03971 560 aa10.81□□□□□ -0.68
VPS9D1-205ENST00000565452 CT47B1P0C2W7 299 aaPredicted RBP10.81□□□□□ -0.68
VPS9D1-205ENST00000565452 LTBRP36941 435 aa10.81□□□□□ -0.68
VPS9D1-205ENST00000565452 CHMP4BP1P59074 171 aa10.81□□□□□ -0.68
VPS9D1-205ENST00000565452 ATP8B2P98198 1209 aa10.81□□□□□ -0.68
VPS9D1-205ENST00000565452 SLFN5Q08AF3 891 aa10.81□□□□□ -0.68
VPS9D1-205ENST00000565452 GPNMBQ14956 572 aa10.81□□□□□ -0.68
VPS9D1-205ENST00000565452 CTC1Q2NKJ3 1217 aa10.81□□□□□ -0.68
VPS9D1-205ENST00000565452 ASCL5Q7RTU5 278 aa10.81□□□□□ -0.68
VPS9D1-205ENST00000565452 RPAINQ86UA6 219 aa10.81□□□□□ -0.68
VPS9D1-205ENST00000565452 RPAP2Q8IXW5 612 aaPredicted RBP10.81□□□□□ -0.68
VPS9D1-205ENST00000565452 TRMT2AQ8IZ69 625 aaKnown RBP10.81□□□□□ -0.68
VPS9D1-205ENST00000565452 MORC4Q8TE76 937 aa10.81□□□□□ -0.68
VPS9D1-205ENST00000565452 FSD1Q9BTV5 496 aa10.81□□□□□ -0.68
VPS9D1-205ENST00000565452 ARMT1Q9H993 441 aa10.81□□□□□ -0.68
VPS9D1-205ENST00000565452 MKNK2Q9HBH9 465 aa10.81□□□□□ -0.68
VPS9D1-205ENST00000565452 TLR9Q9NR96 1032 aa10.81□□□□□ -0.68
VPS9D1-205ENST00000565452 ADD3Q9UEY8 706 aaKnown RBP10.81□□□□□ -0.68
VPS9D1-205ENST00000565452 FOCADQ5VW36 1801 aa10.81□□□□□ -0.68
VPS9D1-205ENST00000565452 RIF1Q5UIP0 2472 aaKnown RBP10.8□□□□□ -0.68
VPS9D1-205ENST00000565452 CACNA1HO95180 2353 aa10.8□□□□□ -0.68
VPS9D1-205ENST00000565452 TRIOO75962 3097 aa10.8□□□□□ -0.68
VPS9D1-205ENST00000565452 LOC102724159A0A0B4J2E5 919 aa10.8□□□□□ -0.68
VPS9D1-205ENST00000565452 RBM47A0AV96 593 aaKnown RBP10.8□□□□□ -0.68
VPS9D1-205ENST00000565452 NBNO60934 754 aa10.8□□□□□ -0.68
VPS9D1-205ENST00000565452 ALAS1P13196 640 aa10.8□□□□□ -0.68
VPS9D1-205ENST00000565452 HTRA4P83105 476 aaPredicted RBP10.8□□□□□ -0.68
VPS9D1-205ENST00000565452 SIGLEC14Q08ET2 396 aa10.8□□□□□ -0.68
VPS9D1-205ENST00000565452 SMAD4Q13485 552 aaKnown RBP10.8□□□□□ -0.68
VPS9D1-205ENST00000565452 POLA2Q14181 598 aa10.8□□□□□ -0.68
VPS9D1-205ENST00000565452 PWP2Q15269 919 aaKnown RBP10.8□□□□□ -0.68
VPS9D1-205ENST00000565452 CLUL1Q15846 466 aa10.8□□□□□ -0.68
VPS9D1-205ENST00000565452 TMEM192Q8IY95 271 aa10.8□□□□□ -0.68
VPS9D1-205ENST00000565452 SSH3Q8TE77 659 aa10.8□□□□□ -0.68
VPS9D1-205ENST00000565452 PPP1R13LQ8WUF5 828 aa10.8□□□□□ -0.68
VPS9D1-205ENST00000565452 MKL1Q969V6 931 aa10.8□□□□□ -0.68
VPS9D1-205ENST00000565452 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.8□□□□□ -0.68
VPS9D1-205ENST00000565452 TLR7Q9NYK1 1049 aaKnown RBP10.8□□□□□ -0.68
VPS9D1-205ENST00000565452 CYP39A1Q9NYL5 469 aa10.8□□□□□ -0.68
VPS9D1-205ENST00000565452 CD207Q9UJ71 328 aa10.8□□□□□ -0.68
VPS9D1-205ENST00000565452 NOP58Q9Y2X3 529 aaKnown RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms