RNA–Protein interactions for RNA: ENST00000565370.1

SPG7-211, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 686 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-211ENST00000565370 STAG2Q8N3U4 1231 aa14.28□□□□□ -0.12
SPG7-211ENST00000565370 PCSK9Q8NBP7 692 aaKnown RBP14.28□□□□□ -0.12
SPG7-211ENST00000565370 RGS22Q8NE09 1264 aa14.28□□□□□ -0.12
SPG7-211ENST00000565370 MAP3K14Q99558 947 aa14.28□□□□□ -0.12
SPG7-211ENST00000565370 JMJD4Q9H9V9 463 aa14.28□□□□□ -0.12
SPG7-211ENST00000565370 LY9Q9HBG7 655 aa14.28□□□□□ -0.12
SPG7-211ENST00000565370 ATP11BQ9Y2G3 1177 aa14.28□□□□□ -0.12
SPG7-211ENST00000565370 A0A1W2PQ45 241 aaPredicted RBP14.27□□□□□ -0.13
SPG7-211ENST00000565370 A0A1W2PQY0 241 aa14.27□□□□□ -0.13
SPG7-211ENST00000565370 DLL1O00548 723 aa14.27□□□□□ -0.13
SPG7-211ENST00000565370 SH2B2O14492 632 aaPredicted RBP14.27□□□□□ -0.13
SPG7-211ENST00000565370 REC8O95072 547 aa14.27□□□□□ -0.13
SPG7-211ENST00000565370 TROAPQ12815 778 aa14.27□□□□□ -0.13
SPG7-211ENST00000565370 SLC39A5Q6ZMH5 540 aa14.27□□□□□ -0.13
SPG7-211ENST00000565370 EEPD1Q7L9B9 569 aa14.27□□□□□ -0.13
SPG7-211ENST00000565370 TLK2Q86UE8 772 aa14.27□□□□□ -0.13
SPG7-211ENST00000565370 IGDCC4Q8TDY8 1250 aa14.27□□□□□ -0.13
SPG7-211ENST00000565370 MORC4Q8TE76 937 aa14.27□□□□□ -0.13
SPG7-211ENST00000565370 FERMT2Q96AC1 680 aa14.27□□□□□ -0.13
SPG7-211ENST00000565370 KATNBL1Q9H079 304 aa14.27□□□□□ -0.13
SPG7-211ENST00000565370 AP5M1Q9H0R1 490 aa14.27□□□□□ -0.13
SPG7-211ENST00000565370 UPF3AQ9H1J1 476 aaKnown RBP14.27□□□□□ -0.13
SPG7-211ENST00000565370 PPP4R2Q9NY27 417 aa14.27□□□□□ -0.13
SPG7-211ENST00000565370 SEC63Q9UGP8 760 aaKnown RBP14.27□□□□□ -0.13
SPG7-211ENST00000565370 RANBP2P49792 3224 aaKnown RBP14.26□□□□□ -0.13
SPG7-211ENST00000565370 A0A1W2PPC1 479 aa14.26□□□□□ -0.13
SPG7-211ENST00000565370 ZEB2O60315 1214 aa14.26□□□□□ -0.13
SPG7-211ENST00000565370 SYN1P17600 705 aa14.26□□□□□ -0.13
SPG7-211ENST00000565370 LIFRP42702 1097 aa14.26□□□□□ -0.13
SPG7-211ENST00000565370 GNAQP50148 359 aa14.26□□□□□ -0.13
SPG7-211ENST00000565370 ACLYP53396 1101 aa14.26□□□□□ -0.13
SPG7-211ENST00000565370 GJA9P57773 515 aa14.26□□□□□ -0.13
SPG7-211ENST00000565370 SNX17Q15036 470 aa14.26□□□□□ -0.13
SPG7-211ENST00000565370 C1orf53Q5VUE5 145 aa14.26□□□□□ -0.13
SPG7-211ENST00000565370 SYNE3Q6ZMZ3 975 aa14.26□□□□□ -0.13
SPG7-211ENST00000565370 GLT1D1Q96MS3 346 aa14.26□□□□□ -0.13
SPG7-211ENST00000565370 LZTS2Q9BRK4 669 aa14.26□□□□□ -0.13
SPG7-211ENST00000565370 PRO3102Q9H379 93 aa14.26□□□□□ -0.13
SPG7-211ENST00000565370 STARD7Q9NQZ5 370 aa14.26□□□□□ -0.13
SPG7-211ENST00000565370 SLC12A7Q9Y666 1083 aa14.26□□□□□ -0.13
SPG7-211ENST00000565370 MROH7Q68CQ1 1323 aa14.25□□□□□ -0.13
SPG7-211ENST00000565370 CFBP00751 764 aa14.25□□□□□ -0.13
SPG7-211ENST00000565370 HMGB1P09429 215 aaKnown RBP14.25□□□□□ -0.13
SPG7-211ENST00000565370 PPP2R5BQ15173 497 aa14.25□□□□□ -0.13
SPG7-211ENST00000565370 TRIM60Q495X7 471 aa14.25□□□□□ -0.13
SPG7-211ENST00000565370 IQSEC1Q6DN90 963 aa14.25□□□□□ -0.13
SPG7-211ENST00000565370 SAMD3Q8N6K7 520 aa14.25□□□□□ -0.13
SPG7-211ENST00000565370 KLHDC9Q8NEP7 349 aa14.25□□□□□ -0.13
SPG7-211ENST00000565370 MTMR8Q96EF0 704 aa14.25□□□□□ -0.13
SPG7-211ENST00000565370 NEK1Q96PY6 1258 aa14.25□□□□□ -0.13
SPG7-211ENST00000565370 PURBQ96QR8 312 aaKnown RBP14.25□□□□□ -0.13
SPG7-211ENST00000565370 LBHD1Q9BQE6 289 aaPredicted RBP14.25□□□□□ -0.13
SPG7-211ENST00000565370 SPZ1Q9BXG8 430 aa14.25□□□□□ -0.13
SPG7-211ENST00000565370 RIOX1Q9H6W3 641 aa14.25□□□□□ -0.13
SPG7-211ENST00000565370 SENP2Q9HC62 589 aa14.25□□□□□ -0.13
SPG7-211ENST00000565370 PRDM5Q9NQX1 630 aaPredicted RBP14.25□□□□□ -0.13
SPG7-211ENST00000565370 MAP3K20Q9NYL2 800 aaKnown RBP14.25□□□□□ -0.13
SPG7-211ENST00000565370 PCDHA1Q9Y5I3 950 aa14.25□□□□□ -0.13
SPG7-211ENST00000565370 PNMA6FA0A0J9YX94 578 aa14.24□□□□□ -0.13
SPG7-211ENST00000565370 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.24□□□□□ -0.13
SPG7-211ENST00000565370 NKRFO15226 690 aaKnown RBP eCLIP14.24□□□□□ -0.13
SPG7-211ENST00000565370 ADCY6O43306 1168 aa14.24□□□□□ -0.13
SPG7-211ENST00000565370 EDNRBP24530 442 aa14.24□□□□□ -0.13
SPG7-211ENST00000565370 FGD1P98174 961 aa14.24□□□□□ -0.13
SPG7-211ENST00000565370 KCNA10Q16322 511 aa14.24□□□□□ -0.13
SPG7-211ENST00000565370 BRDTQ58F21 947 aaPredicted RBP14.24□□□□□ -0.13
SPG7-211ENST00000565370 GNASQ5JWF2 1037 aa14.24□□□□□ -0.13
SPG7-211ENST00000565370 MICU3Q86XE3 530 aa14.24□□□□□ -0.13
SPG7-211ENST00000565370 SLC17A8Q8NDX2 589 aa14.24□□□□□ -0.13
SPG7-211ENST00000565370 SYTL5Q8TDW5 730 aaPredicted RBP14.24□□□□□ -0.13
SPG7-211ENST00000565370 NSUN6Q8TEA1 469 aaKnown RBP14.24□□□□□ -0.13
SPG7-211ENST00000565370 SCFD2Q8WU76 684 aa14.24□□□□□ -0.13
SPG7-211ENST00000565370 RRP36Q96EU6 259 aaKnown RBP14.24□□□□□ -0.13
SPG7-211ENST00000565370 PIGSQ96S52 555 aa14.24□□□□□ -0.13
SPG7-211ENST00000565370 MYL10Q9BUA6 226 aa14.24□□□□□ -0.13
SPG7-211ENST00000565370 Q9Y3F1 56 aa14.24□□□□□ -0.13
SPG7-211ENST00000565370 LTBP2Q14767 1821 aa14.24□□□□□ -0.13
SPG7-211ENST00000565370 ELP1O95163 1332 aa14.23□□□□□ -0.13
SPG7-211ENST00000565370 A0A0U1RQG5 324 aaPredicted RBP14.23□□□□□ -0.13
SPG7-211ENST00000565370 MYADML2A6NDP7 307 aa14.23□□□□□ -0.13
SPG7-211ENST00000565370 CABYRO75952 493 aa14.23□□□□□ -0.13
SPG7-211ENST00000565370 ASGR1P07306 291 aa14.23□□□□□ -0.13
SPG7-211ENST00000565370 SMPD1P17405 629 aa14.23□□□□□ -0.13
SPG7-211ENST00000565370 MAGEA10P43363 369 aaPredicted RBP14.23□□□□□ -0.13
SPG7-211ENST00000565370 FSCN1Q16658 493 aaKnown RBP14.23□□□□□ -0.13
SPG7-211ENST00000565370 DUSP28Q4G0W2 176 aa14.23□□□□□ -0.13
SPG7-211ENST00000565370 ARHGEF16Q5VV41 709 aa14.23□□□□□ -0.13
SPG7-211ENST00000565370 TAPT1Q6NXT6 567 aa14.23□□□□□ -0.13
SPG7-211ENST00000565370 VTI1AQ96AJ9 217 aa14.23□□□□□ -0.13
SPG7-211ENST00000565370 IWS1Q96ST2 819 aa14.23□□□□□ -0.13
SPG7-211ENST00000565370 RMDN3Q96TC7 470 aa14.23□□□□□ -0.13
SPG7-211ENST00000565370 LRRC2Q9BYS8 371 aa14.23□□□□□ -0.13
SPG7-211ENST00000565370 WDR11Q9BZH6 1224 aa14.23□□□□□ -0.13
SPG7-211ENST00000565370 GNEQ9Y223 722 aaKnown RBP14.23□□□□□ -0.13
SPG7-211ENST00000565370 PQBP1O60828 265 aaKnown RBP14.22□□□□□ -0.13
SPG7-211ENST00000565370 PPP1R11O60927 126 aaPredicted RBP14.22□□□□□ -0.13
SPG7-211ENST00000565370 CLTBP09497 229 aa14.22□□□□□ -0.13
SPG7-211ENST00000565370 SMARCA1P28370 1054 aa14.22□□□□□ -0.13
SPG7-211ENST00000565370 CPT1AP50416 773 aa14.22□□□□□ -0.13
SPG7-211ENST00000565370 HSD17B4P51659 736 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms