RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 DUSP28Q4G0W2 176 aa10.11□□□□□ -0.79
CAPN3-213ENST00000565173 MFSD6Q6ZSS7 791 aa10.11□□□□□ -0.79
CAPN3-213ENST00000565173 KIAA1211Q6ZU35 1233 aa10.11□□□□□ -0.79
CAPN3-213ENST00000565173 ZNF365Q70YC5 407 aa10.11□□□□□ -0.79
CAPN3-213ENST00000565173 TBC1D10CQ8IV04 446 aa10.11□□□□□ -0.79
CAPN3-213ENST00000565173 PLEKHM2Q8IWE5 1019 aa10.11□□□□□ -0.79
CAPN3-213ENST00000565173 TMEM199Q8N511 208 aa10.11□□□□□ -0.79
CAPN3-213ENST00000565173 PPP1R12CQ9BZL4 782 aa10.11□□□□□ -0.79
CAPN3-213ENST00000565173 AP5M1Q9H0R1 490 aa10.11□□□□□ -0.79
CAPN3-213ENST00000565173 TRPV6Q9H1D0 765 aa10.11□□□□□ -0.79
CAPN3-213ENST00000565173 OSBPL3Q9H4L5 887 aa10.11□□□□□ -0.79
CAPN3-213ENST00000565173 ZNF576Q9H609 170 aa10.11□□□□□ -0.79
CAPN3-213ENST00000565173 VTA1Q9NP79 307 aa10.11□□□□□ -0.79
CAPN3-213ENST00000565173 TRANK1O15050 2925 aa10.1□□□□□ -0.79
CAPN3-213ENST00000565173 NEDD4P46934 1319 aa10.1□□□□□ -0.79
CAPN3-213ENST00000565173 GRXCR1A8MXD5 290 aa10.1□□□□□ -0.79
CAPN3-213ENST00000565173 TRIM6-TRIM34B2RNG4 842 aa10.1□□□□□ -0.79
CAPN3-213ENST00000565173 TLR3O15455 904 aaKnown RBP10.1□□□□□ -0.79
CAPN3-213ENST00000565173 PCP11498 1178 aaKnown RBP10.1□□□□□ -0.79
CAPN3-213ENST00000565173 EDNRBP24530 442 aa10.1□□□□□ -0.79
CAPN3-213ENST00000565173 PBX2P40425 430 aa10.1□□□□□ -0.79
CAPN3-213ENST00000565173 PSMC6P62333 389 aa10.1□□□□□ -0.79
CAPN3-213ENST00000565173 NUCB1Q02818 461 aa10.1□□□□□ -0.79
CAPN3-213ENST00000565173 AAMPQ13685 434 aa10.1□□□□□ -0.79
CAPN3-213ENST00000565173 B4GALNT3Q6L9W6 998 aa10.1□□□□□ -0.79
CAPN3-213ENST00000565173 SLC30A10Q6XR72 485 aa10.1□□□□□ -0.79
CAPN3-213ENST00000565173 CHD1LQ86WJ1 897 aa10.1□□□□□ -0.79
CAPN3-213ENST00000565173 RILPL2Q969X0 211 aa10.1□□□□□ -0.79
CAPN3-213ENST00000565173 SEZ6LQ9BYH1 1024 aa10.1□□□□□ -0.79
CAPN3-213ENST00000565173 PBX4Q9BYU1 374 aa10.1□□□□□ -0.79
CAPN3-213ENST00000565173 WDR11Q9BZH6 1224 aa10.1□□□□□ -0.79
CAPN3-213ENST00000565173 HIPK3Q9H422 1215 aa10.1□□□□□ -0.79
CAPN3-213ENST00000565173 IL23AQ9NPF7 189 aa10.1□□□□□ -0.79
CAPN3-213ENST00000565173 CXXC1Q9P0U4 656 aaPredicted RBP10.1□□□□□ -0.79
CAPN3-213ENST00000565173 PTPDC1A2A3K4 754 aa10.09□□□□□ -0.79
CAPN3-213ENST00000565173 ZEB2O60315 1214 aa10.09□□□□□ -0.79
CAPN3-213ENST00000565173 FOSL2P15408 326 aa10.09□□□□□ -0.79
CAPN3-213ENST00000565173 RPS6P62753 249 aaKnown RBP10.09□□□□□ -0.79
CAPN3-213ENST00000565173 PURAQ00577 322 aaKnown RBP10.09□□□□□ -0.79
CAPN3-213ENST00000565173 PSRC1Q6PGN9 363 aaPredicted RBP10.09□□□□□ -0.79
CAPN3-213ENST00000565173 DGKHQ86XP1 1220 aa10.09□□□□□ -0.79
CAPN3-213ENST00000565173 HERVK_113Q902F9 699 aa10.09□□□□□ -0.79
CAPN3-213ENST00000565173 ANKS1AQ92625 1134 aa10.09□□□□□ -0.79
CAPN3-213ENST00000565173 TIFAQ96CG3 184 aa10.09□□□□□ -0.79
CAPN3-213ENST00000565173 ZKSCAN3Q9BRR0 538 aa10.09□□□□□ -0.79
CAPN3-213ENST00000565173 NOC4LQ9BVI4 516 aaKnown RBP10.09□□□□□ -0.79
CAPN3-213ENST00000565173 WNT8AQ9H1J5 351 aa10.09□□□□□ -0.79
CAPN3-213ENST00000565173 ALDH8A1Q9H2A2 487 aaPredicted RBP10.09□□□□□ -0.79
CAPN3-213ENST00000565173 CPVLQ9H3G5 476 aa10.09□□□□□ -0.79
CAPN3-213ENST00000565173 RWDD1Q9H446 243 aaPredicted RBP10.09□□□□□ -0.79
CAPN3-213ENST00000565173 ADD3Q9UEY8 706 aaKnown RBP10.09□□□□□ -0.79
CAPN3-213ENST00000565173 WDR19Q8NEZ3 1342 aa10.08□□□□□ -0.8
CAPN3-213ENST00000565173 ZNF213O14771 459 aa10.08□□□□□ -0.8
CAPN3-213ENST00000565173 GOLGA8HP0CJ92 632 aa10.08□□□□□ -0.8
CAPN3-213ENST00000565173 CALML3P27482 149 aa10.08□□□□□ -0.8
CAPN3-213ENST00000565173 CCL23P55773 120 aa10.08□□□□□ -0.8
CAPN3-213ENST00000565173 CWC27Q6UX04 472 aaKnown RBP10.08□□□□□ -0.8
CAPN3-213ENST00000565173 RNF207Q6ZRF8 634 aa10.08□□□□□ -0.8
CAPN3-213ENST00000565173 USP38Q8NB14 1042 aa10.08□□□□□ -0.8
CAPN3-213ENST00000565173 RGS22Q8NE09 1264 aa10.08□□□□□ -0.8
CAPN3-213ENST00000565173 DNERQ8NFT8 737 aa10.08□□□□□ -0.8
CAPN3-213ENST00000565173 TBC1D5Q92609 795 aa10.08□□□□□ -0.8
CAPN3-213ENST00000565173 ESR2Q92731 530 aa10.08□□□□□ -0.8
CAPN3-213ENST00000565173 UBA5Q9GZZ9 404 aa10.08□□□□□ -0.8
CAPN3-213ENST00000565173 RNF41Q9H4P4 317 aaPredicted RBP10.08□□□□□ -0.8
CAPN3-213ENST00000565173 PNMA2Q9UL42 364 aa10.08□□□□□ -0.8
CAPN3-213ENST00000565173 A6NJR5 290 aa10.07□□□□□ -0.8
CAPN3-213ENST00000565173 FGBP02675 491 aa10.07□□□□□ -0.8
CAPN3-213ENST00000565173 MFAP1P55081 439 aaKnown RBP10.07□□□□□ -0.8
CAPN3-213ENST00000565173 GPATCH4Q5T3I0 446 aaKnown RBP10.07□□□□□ -0.8
CAPN3-213ENST00000565173 EXOC6Q8TAG9 804 aa10.07□□□□□ -0.8
CAPN3-213ENST00000565173 COPS5Q92905 334 aa10.07□□□□□ -0.8
CAPN3-213ENST00000565173 TRMT13Q9NUP7 481 aaKnown RBP10.07□□□□□ -0.8
CAPN3-213ENST00000565173 POLR3EQ9NVU0 708 aa10.07□□□□□ -0.8
CAPN3-213ENST00000565173 ZSWIM5Q9P217 1185 aa10.07□□□□□ -0.8
CAPN3-213ENST00000565173 B4E1Z4 1266 aa10.06□□□□□ -0.8
CAPN3-213ENST00000565173 KDM4AO75164 1064 aa10.06□□□□□ -0.8
CAPN3-213ENST00000565173 ARIH2O95376 493 aa10.06□□□□□ -0.8
CAPN3-213ENST00000565173 CYP2C9P11712 490 aa10.06□□□□□ -0.8
CAPN3-213ENST00000565173 NT5C2P49902 561 aa10.06□□□□□ -0.8
CAPN3-213ENST00000565173 CPT1AP50416 773 aa10.06□□□□□ -0.8
CAPN3-213ENST00000565173 PDE4DQ08499 809 aa10.06□□□□□ -0.8
CAPN3-213ENST00000565173 NBPF20Q3BBV1 942 aa10.06□□□□□ -0.8
CAPN3-213ENST00000565173 USH1GQ495M9 461 aa10.06□□□□□ -0.8
CAPN3-213ENST00000565173 CCDC62Q6P9F0 684 aa10.06□□□□□ -0.8
CAPN3-213ENST00000565173 OTOP2Q7RTS6 562 aa10.06□□□□□ -0.8
CAPN3-213ENST00000565173 ADGRF4Q8IZF3 695 aa10.06□□□□□ -0.8
CAPN3-213ENST00000565173 ENAHQ8N8S7 591 aaPredicted RBP10.06□□□□□ -0.8
CAPN3-213ENST00000565173 PNMA1Q8ND90 353 aa10.06□□□□□ -0.8
CAPN3-213ENST00000565173 OR6J1Q8NGC5 347 aa10.06□□□□□ -0.8
CAPN3-213ENST00000565173 SCFD2Q8WU76 684 aa10.06□□□□□ -0.8
CAPN3-213ENST00000565173 SCLYQ96I15 445 aa10.06□□□□□ -0.8
CAPN3-213ENST00000565173 ZSCAN10Q96SZ4 725 aaPredicted RBP10.06□□□□□ -0.8
CAPN3-213ENST00000565173 MTG1Q9BT17 334 aaPredicted RBP10.06□□□□□ -0.8
CAPN3-213ENST00000565173 DSCC1Q9BVC3 393 aa10.06□□□□□ -0.8
CAPN3-213ENST00000565173 MAF1Q9H063 256 aa10.06□□□□□ -0.8
CAPN3-213ENST00000565173 IL25Q9H293 177 aa10.06□□□□□ -0.8
CAPN3-213ENST00000565173 COL20A1Q9P218 1284 aa10.06□□□□□ -0.8
CAPN3-213ENST00000565173 YBX2Q9Y2T7 364 aaKnown RBP10.06□□□□□ -0.8
CAPN3-213ENST00000565173 TNKSO95271 1327 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms