RNA–Protein interactions for RNA: ENST00000564890.1

PKD1-229, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 574 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-229ENST00000564890 ADD3Q9UEY8 706 aaKnown RBP21.56■■□□□ 1.04
PKD1-229ENST00000564890 DDX49Q9Y6V7 483 aaKnown RBP21.56■■□□□ 1.04
PKD1-229ENST00000564890 GOLGA8AA7E2F4 631 aa21.55■■□□□ 1.04
PKD1-229ENST00000564890 GOLGA8BA8MQT2 603 aa21.55■■□□□ 1.04
PKD1-229ENST00000564890 ACVR2BQ13705 512 aa21.55■■□□□ 1.04
PKD1-229ENST00000564890 RTN1Q16799 776 aa21.55■■□□□ 1.04
PKD1-229ENST00000564890 DIS3LQ8TF46 1054 aaKnown RBP21.55■■□□□ 1.04
PKD1-229ENST00000564890 TM6SF1Q9BZW5 370 aa21.55■■□□□ 1.04
PKD1-229ENST00000564890 MAF1Q9H063 256 aa21.55■■□□□ 1.04
PKD1-229ENST00000564890 ABHD16BQ9H3Z7 469 aa21.55■■□□□ 1.04
PKD1-229ENST00000564890 RBM28Q9NW13 759 aaKnown RBP21.55■■□□□ 1.04
PKD1-229ENST00000564890 SEC63Q9UGP8 760 aaKnown RBP21.55■■□□□ 1.04
PKD1-229ENST00000564890 CYP46A1Q9Y6A2 500 aa21.55■■□□□ 1.04
PKD1-229ENST00000564890 FRMPD3Q5JV73 1810 aa21.55■■□□□ 1.04
PKD1-229ENST00000564890 SEC24BO95487 1268 aa21.54■■□□□ 1.04
PKD1-229ENST00000564890 AKR1A1P14550 325 aa21.54■■□□□ 1.04
PKD1-229ENST00000564890 ALDH5A1P51649 535 aaPredicted RBP21.54■■□□□ 1.04
PKD1-229ENST00000564890 RCAN1P53805 252 aa21.54■■□□□ 1.04
PKD1-229ENST00000564890 FBXL16Q8N461 479 aa21.54■■□□□ 1.04
PKD1-229ENST00000564890 CCDC82Q8N4S0 544 aa21.54■■□□□ 1.04
PKD1-229ENST00000564890 PAWRQ96IZ0 340 aaKnown RBP21.54■■□□□ 1.04
PKD1-229ENST00000564890 AGXT2Q9BYV1 514 aa21.54■■□□□ 1.04
PKD1-229ENST00000564890 UPF3BQ9BZI7 483 aaKnown RBP21.54■■□□□ 1.04
PKD1-229ENST00000564890 FAM184BQ9ULE4 1060 aa21.54■■□□□ 1.04
PKD1-229ENST00000564890 OPLAHO14841 1288 aa21.53■■□□□ 1.04
PKD1-229ENST00000564890 CFBP00751 764 aa21.53■■□□□ 1.04
PKD1-229ENST00000564890 RARBP10826 455 aa21.53■■□□□ 1.04
PKD1-229ENST00000564890 MNX1P50219 401 aaPredicted RBP21.53■■□□□ 1.04
PKD1-229ENST00000564890 DNERQ8NFT8 737 aa21.53■■□□□ 1.04
PKD1-229ENST00000564890 SYTL5Q8TDW5 730 aaPredicted RBP21.53■■□□□ 1.04
PKD1-229ENST00000564890 KATNBL1Q9H079 304 aa21.53■■□□□ 1.04
PKD1-229ENST00000564890 LOC102724159A0A0B4J2E5 919 aa21.52■■□□□ 1.04
PKD1-229ENST00000564890 PWP2Q15269 919 aaKnown RBP21.52■■□□□ 1.04
PKD1-229ENST00000564890 NECAB2Q7Z6G3 386 aa21.52■■□□□ 1.04
PKD1-229ENST00000564890 MORC4Q8TE76 937 aa21.52■■□□□ 1.04
PKD1-229ENST00000564890 LENG1Q96BZ8 264 aaPredicted RBP21.52■■□□□ 1.04
PKD1-229ENST00000564890 COL20A1Q9P218 1284 aa21.52■■□□□ 1.04
PKD1-229ENST00000564890 hCG_1642624A0A1W2PR95 340 aa21.51■■□□□ 1.03
PKD1-229ENST00000564890 CDC27P30260 824 aa21.51■■□□□ 1.03
PKD1-229ENST00000564890 METAP2P50579 478 aaKnown RBP eCLIP21.51■■□□□ 1.032e-6■■■■□ 24.6
PKD1-229ENST00000564890 HSD17B4P51659 736 aa21.51■■□□□ 1.03
PKD1-229ENST00000564890 ANAPC15P60006 121 aa21.51■■□□□ 1.03
PKD1-229ENST00000564890 CCDC144BQ3MJ40 725 aa21.51■■□□□ 1.03
PKD1-229ENST00000564890 C8orf34Q49A92 452 aa21.51■■□□□ 1.03
PKD1-229ENST00000564890 EEPD1Q7L9B9 569 aa21.51■■□□□ 1.03
PKD1-229ENST00000564890 FBXO16Q8IX29 292 aaPredicted RBP21.51■■□□□ 1.03
PKD1-229ENST00000564890 MPHOSPH6Q99547 160 aaKnown RBP21.51■■□□□ 1.03
PKD1-229ENST00000564890 XPNPEP3Q9NQH7 507 aa21.51■■□□□ 1.03
PKD1-229ENST00000564890 FAM217BQ9NTX9 383 aaPredicted RBP21.51■■□□□ 1.03
PKD1-229ENST00000564890 CNTNAP5Q8WYK1 1306 aa21.51■■□□□ 1.03
PKD1-229ENST00000564890 MKI67P46013 3256 aaKnown RBP21.5■■□□□ 1.03
PKD1-229ENST00000564890 LRRC37A2A6NM11 1700 aa21.5■■□□□ 1.03
PKD1-229ENST00000564890 MYCNP04198 464 aaPredicted RBP21.5■■□□□ 1.03
PKD1-229ENST00000564890 GHRHRQ02643 423 aa21.5■■□□□ 1.03
PKD1-229ENST00000564890 TOB2Q14106 344 aaPredicted RBP21.5■■□□□ 1.03
PKD1-229ENST00000564890 ARRDC4Q8NCT1 418 aa21.5■■□□□ 1.03
PKD1-229ENST00000564890 TAAR1Q96RJ0 339 aa21.5■■□□□ 1.03
PKD1-229ENST00000564890 C11orf49Q9H6J7 331 aa21.5■■□□□ 1.03
PKD1-229ENST00000564890 PDRG1Q9NUG6 133 aa21.5■■□□□ 1.03
PKD1-229ENST00000564890 B4DLN1 442 aa21.49■■□□□ 1.03
PKD1-229ENST00000564890 DNM1LO00429 736 aa21.49■■□□□ 1.03
PKD1-229ENST00000564890 EDNRBP24530 442 aa21.49■■□□□ 1.03
PKD1-229ENST00000564890 HOXA13P31271 388 aaPredicted RBP21.49■■□□□ 1.03
PKD1-229ENST00000564890 MRPL12P52815 198 aaKnown RBP21.49■■□□□ 1.03
PKD1-229ENST00000564890 PDE4DQ08499 809 aa21.49■■□□□ 1.03
PKD1-229ENST00000564890 PPP2R5BQ15173 497 aa21.49■■□□□ 1.03
PKD1-229ENST00000564890 GJC2Q5T442 439 aaPredicted RBP21.49■■□□□ 1.03
PKD1-229ENST00000564890 SAMD3Q8N6K7 520 aa21.49■■□□□ 1.03
PKD1-229ENST00000564890 NSUN6Q8TEA1 469 aaKnown RBP21.49■■□□□ 1.03
PKD1-229ENST00000564890 RMDN3Q96TC7 470 aa21.49■■□□□ 1.03
PKD1-229ENST00000564890 HTATIP2Q9BUP3 242 aa21.49■■□□□ 1.03
PKD1-229ENST00000564890 VTA1Q9NP79 307 aa21.49■■□□□ 1.03
PKD1-229ENST00000564890 MAP3K20Q9NYL2 800 aaKnown RBP21.49■■□□□ 1.03
PKD1-229ENST00000564890 PDE4DIPQ5VU43 2346 aa21.48■■□□□ 1.03
PKD1-229ENST00000564890 CCDC196A0A1B0GTZ2 297 aa21.48■■□□□ 1.03
PKD1-229ENST00000564890 GCOM1H8Y6P7 765 aaPredicted RBP21.48■■□□□ 1.03
PKD1-229ENST00000564890 ADCY6O43306 1168 aa21.48■■□□□ 1.03
PKD1-229ENST00000564890 PGK1P00558 417 aa21.48■■□□□ 1.03
PKD1-229ENST00000564890 POLR2MP0CAP2 368 aa21.48■■□□□ 1.03
PKD1-229ENST00000564890 ADD1P35611 737 aaKnown RBP21.48■■□□□ 1.03
PKD1-229ENST00000564890 FUT2Q10981 343 aa21.48■■□□□ 1.03
PKD1-229ENST00000564890 LRRC41Q15345 812 aa21.48■■□□□ 1.03
PKD1-229ENST00000564890 PDGFCQ9NRA1 345 aa21.48■■□□□ 1.03
PKD1-229ENST00000564890 NID2Q14112 1375 aa21.48■■□□□ 1.03
PKD1-229ENST00000564890 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.47■■□□□ 1.03
PKD1-229ENST00000564890 KBTBD13C9JR72 458 aa21.47■■□□□ 1.03
PKD1-229ENST00000564890 DUSP11O75319 330 aaKnown RBP21.47■■□□□ 1.03
PKD1-229ENST00000564890 PDIA3P30101 505 aaKnown RBP21.47■■□□□ 1.03
PKD1-229ENST00000564890 ADCYAP1R1P41586 468 aa21.47■■□□□ 1.03
PKD1-229ENST00000564890 EVCP57679 992 aa21.47■■□□□ 1.03
PKD1-229ENST00000564890 TNFAIP2Q03169 654 aa21.47■■□□□ 1.03
PKD1-229ENST00000564890 ARHGEF16Q5VV41 709 aa21.47■■□□□ 1.03
PKD1-229ENST00000564890 TAPT1Q6NXT6 567 aa21.47■■□□□ 1.03
PKD1-229ENST00000564890 HEATR3Q7Z4Q2 680 aa21.47■■□□□ 1.03
PKD1-229ENST00000564890 V9GY48 417 aaPredicted RBP21.47■■□□□ 1.03
PKD1-229ENST00000564890 TNRC18O15417 2968 aaPredicted RBP21.47■■□□□ 1.03
PKD1-229ENST00000564890 COL6A1P12109 1028 aa21.46■■□□□ 1.03
PKD1-229ENST00000564890 EIF2AK2P19525 551 aaKnown RBP21.46■■□□□ 1.03
PKD1-229ENST00000564890 NOL8Q76FK4 1167 aaKnown RBP21.46■■□□□ 1.03
PKD1-229ENST00000564890 RNF180Q86T96 592 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms