RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 IWS1Q96ST2 819 aa3.75□□□□□ -1.81
CHD9-213ENST00000564845 RIOK1Q9BRS2 568 aaKnown RBP3.75□□□□□ -1.81
CHD9-213ENST00000564845 MAGEC2Q9UBF1 373 aaPredicted RBP3.75□□□□□ -1.81
CHD9-213ENST00000564845 FGFR2P21802 821 aa3.74□□□□□ -1.81
CHD9-213ENST00000564845 SPAG1Q07617 926 aa3.74□□□□□ -1.81
CHD9-213ENST00000564845 TRERF1Q96PN7 1200 aa3.74□□□□□ -1.81
CHD9-213ENST00000564845 PPP1R9BQ96SB3 815 aa3.74□□□□□ -1.81
CHD9-213ENST00000564845 TMEM39BQ9GZU3 492 aa3.74□□□□□ -1.81
CHD9-213ENST00000564845 FBXO28Q9NVF7 368 aa3.74□□□□□ -1.81
CHD9-213ENST00000564845 FANCLQ9NW38 375 aa3.74□□□□□ -1.81
CHD9-213ENST00000564845 AHDC1Q5TGY3 1603 aaPredicted RBP3.74□□□□□ -1.81
CHD9-213ENST00000564845 PATL2C9JE40 543 aaKnown RBP3.74□□□□□ -1.81
CHD9-213ENST00000564845 TEX33O43247 280 aa3.74□□□□□ -1.81
CHD9-213ENST00000564845 CERKQ8TCT0 537 aa3.74□□□□□ -1.81
CHD9-213ENST00000564845 DRC1Q96MC2 740 aa3.74□□□□□ -1.81
CHD9-213ENST00000564845 RUNDC3BQ96NL0 473 aa3.74□□□□□ -1.81
CHD9-213ENST00000564845 MAF1Q9H063 256 aa3.74□□□□□ -1.81
CHD9-213ENST00000564845 GDAQ9Y2T3 454 aa3.74□□□□□ -1.81
CHD9-213ENST00000564845 H0YCG3 227 aa3.74□□□□□ -1.81
CHD9-213ENST00000564845 FCER1AP12319 257 aa3.74□□□□□ -1.81
CHD9-213ENST00000564845 ATP2A2P16615 1042 aaKnown RBP3.74□□□□□ -1.81
CHD9-213ENST00000564845 CALML3P27482 149 aa3.74□□□□□ -1.81
CHD9-213ENST00000564845 EEPD1Q7L9B9 569 aa3.74□□□□□ -1.81
CHD9-213ENST00000564845 FCHSD1Q86WN1 690 aa3.74□□□□□ -1.81
CHD9-213ENST00000564845 ZMYND10O75800 440 aa3.74□□□□□ -1.81
CHD9-213ENST00000564845 LDHBP07195 334 aaKnown RBP3.74□□□□□ -1.81
CHD9-213ENST00000564845 U2AF2P26368 475 aaKnown RBP eCLIP3.74□□□□□ -1.813e-6■■■□□ 17
CHD9-213ENST00000564845 SSRP1Q08945 709 aaKnown RBP3.74□□□□□ -1.81
CHD9-213ENST00000564845 PKN1Q16512 942 aa3.74□□□□□ -1.81
CHD9-213ENST00000564845 TAOK1Q7L7X3 1001 aa3.74□□□□□ -1.81
CHD9-213ENST00000564845 FBXL16Q8N461 479 aa3.74□□□□□ -1.81
CHD9-213ENST00000564845 ANGEL1Q9UNK9 670 aaKnown RBP3.74□□□□□ -1.81
CHD9-213ENST00000564845 PAXBP1Q9Y5B6 917 aa3.74□□□□□ -1.81
CHD9-213ENST00000564845 EIF3CLB5ME19 914 aaKnown RBP3.74□□□□□ -1.81
CHD9-213ENST00000564845 SH2B2O14492 632 aaPredicted RBP3.74□□□□□ -1.81
CHD9-213ENST00000564845 CYP4A11Q02928 519 aa3.74□□□□□ -1.81
CHD9-213ENST00000564845 TEX11Q8IYF3 940 aa3.74□□□□□ -1.81
CHD9-213ENST00000564845 SYMPKQ92797 1274 aaKnown RBP3.74□□□□□ -1.81
CHD9-213ENST00000564845 PRMT6Q96LA8 375 aaPredicted RBP3.74□□□□□ -1.81
CHD9-213ENST00000564845 EIF3CQ99613 913 aaKnown RBP3.74□□□□□ -1.81
CHD9-213ENST00000564845 LZTS2Q9BRK4 669 aa3.74□□□□□ -1.81
CHD9-213ENST00000564845 THRAP3Q9Y2W1 955 aaKnown RBP3.74□□□□□ -1.81
CHD9-213ENST00000564845 ZBTB22O15209 634 aa3.74□□□□□ -1.81
CHD9-213ENST00000564845 DDX5P17844 614 aaKnown RBP3.74□□□□□ -1.81
CHD9-213ENST00000564845 POLD1P28340 1107 aa3.74□□□□□ -1.81
CHD9-213ENST00000564845 ORC2Q13416 577 aaPredicted RBP3.74□□□□□ -1.81
CHD9-213ENST00000564845 TMEM63BQ5T3F8 832 aa3.74□□□□□ -1.81
CHD9-213ENST00000564845 POTEDQ86YR6 584 aa3.74□□□□□ -1.81
CHD9-213ENST00000564845 NELFCDQ8IXH7 590 aa3.74□□□□□ -1.81
CHD9-213ENST00000564845 CNNM3Q8NE01 707 aa3.74□□□□□ -1.81
CHD9-213ENST00000564845 SMCR8Q8TEV9 937 aaPredicted RBP3.74□□□□□ -1.81
CHD9-213ENST00000564845 ENC1O14682 589 aa3.74□□□□□ -1.81
CHD9-213ENST00000564845 SPTLC2O15270 562 aa3.74□□□□□ -1.81
CHD9-213ENST00000564845 SERPINC1P01008 464 aa3.74□□□□□ -1.81
CHD9-213ENST00000564845 CCDC96Q2M329 555 aa3.74□□□□□ -1.81
CHD9-213ENST00000564845 RSPH1Q8WYR4 309 aa3.74□□□□□ -1.81
CHD9-213ENST00000564845 ZKSCAN4Q969J2 545 aaPredicted RBP3.74□□□□□ -1.81
CHD9-213ENST00000564845 XPO4Q9C0E2 1151 aaKnown RBP3.74□□□□□ -1.81
CHD9-213ENST00000564845 CD209Q9NNX6 404 aa3.74□□□□□ -1.81
CHD9-213ENST00000564845 NPY5RQ15761 445 aa3.74□□□□□ -1.81
CHD9-213ENST00000564845 ODR4Q5SWX8 454 aa3.74□□□□□ -1.81
CHD9-213ENST00000564845 C6orf163Q5TEZ5 329 aa3.74□□□□□ -1.81
CHD9-213ENST00000564845 LEKR1Q6ZMV7 388 aa3.74□□□□□ -1.81
CHD9-213ENST00000564845 POP5Q969H6 163 aaKnown RBP3.74□□□□□ -1.81
CHD9-213ENST00000564845 KIFC2Q96AC6 838 aa3.74□□□□□ -1.81
CHD9-213ENST00000564845 HELLSQ9NRZ9 838 aa3.74□□□□□ -1.81
CHD9-213ENST00000564845 CACNA1SQ13698 1873 aa3.74□□□□□ -1.81
CHD9-213ENST00000564845 PFDN6O15212 129 aa3.74□□□□□ -1.81
CHD9-213ENST00000564845 TDP2O95551 362 aa3.74□□□□□ -1.81
CHD9-213ENST00000564845 MYCNP04198 464 aaPredicted RBP3.74□□□□□ -1.81
CHD9-213ENST00000564845 PTGDRQ13258 359 aa3.74□□□□□ -1.81
CHD9-213ENST00000564845 ECM1Q16610 540 aa3.74□□□□□ -1.81
CHD9-213ENST00000564845 MYSM1Q5VVJ2 828 aa3.74□□□□□ -1.81
CHD9-213ENST00000564845 IQCA1Q86XH1 822 aa3.74□□□□□ -1.81
CHD9-213ENST00000564845 JPH2Q9BR39 696 aaPredicted RBP3.74□□□□□ -1.81
CHD9-213ENST00000564845 TSGA10Q9BZW7 698 aa3.74□□□□□ -1.81
CHD9-213ENST00000564845 RGL2O15211 777 aa3.73□□□□□ -1.81
CHD9-213ENST00000564845 EDIL3O43854 480 aa3.73□□□□□ -1.81
CHD9-213ENST00000564845 CSPG5O95196 566 aa3.73□□□□□ -1.81
CHD9-213ENST00000564845 YY1P25490 414 aa3.73□□□□□ -1.81
CHD9-213ENST00000564845 HOXC8P31273 242 aa3.73□□□□□ -1.81
CHD9-213ENST00000564845 NTRK3Q16288 839 aa3.73□□□□□ -1.81
CHD9-213ENST00000564845 RTN1Q16799 776 aa3.73□□□□□ -1.81
CHD9-213ENST00000564845 ZSCAN10Q96SZ4 725 aaPredicted RBP3.73□□□□□ -1.81
CHD9-213ENST00000564845 GOLPH3Q9H4A6 298 aa3.73□□□□□ -1.81
CHD9-213ENST00000564845 MAGEF1Q9HAY2 307 aa3.73□□□□□ -1.81
CHD9-213ENST00000564845 LZTFL1Q9NQ48 299 aa3.73□□□□□ -1.81
CHD9-213ENST00000564845 RNF225M0QZC1 329 aaPredicted RBP3.73□□□□□ -1.81
CHD9-213ENST00000564845 PFKFB2O60825 505 aa3.73□□□□□ -1.81
CHD9-213ENST00000564845 MYL1P05976 194 aa3.73□□□□□ -1.81
CHD9-213ENST00000564845 HSPA8P11142 646 aaKnown RBP3.73□□□□□ -1.81
CHD9-213ENST00000564845 PPFIA1Q13136 1202 aa3.73□□□□□ -1.81
CHD9-213ENST00000564845 CCDC183Q5T5S1 534 aa3.73□□□□□ -1.81
CHD9-213ENST00000564845 TBC1D16Q8TBP0 767 aa3.73□□□□□ -1.81
CHD9-213ENST00000564845 PPP1R2P1Q96PQ5 205 aa3.73□□□□□ -1.81
CHD9-213ENST00000564845 POLE3Q9NRF9 147 aa3.73□□□□□ -1.81
CHD9-213ENST00000564845 LAMA4Q16363 1823 aa3.73□□□□□ -1.81
CHD9-213ENST00000564845 COL5A3P25940 1745 aaPredicted RBP3.73□□□□□ -1.81
CHD9-213ENST00000564845 TISP43B9A030 160 aa3.73□□□□□ -1.81
CHD9-213ENST00000564845 TNNT1P13805 278 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms