RNA–Protein interactions for RNA: ENST00000564770.1

CDH11-210, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 425 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-210ENST00000564770 HIPK3Q9H422 1215 aa18.77■□□□□ 0.6
CDH11-210ENST00000564770 IL23AQ9NPF7 189 aa18.77■□□□□ 0.6
CDH11-210ENST00000564770 TOMM22Q9NS69 142 aa18.77■□□□□ 0.6
CDH11-210ENST00000564770 CABYRO75952 493 aa18.76■□□□□ 0.59
CDH11-210ENST00000564770 HSPD1P10809 573 aaKnown RBP18.76■□□□□ 0.59
CDH11-210ENST00000564770 PDHBP11177 359 aa18.76■□□□□ 0.59
CDH11-210ENST00000564770 TOP1P11387 765 aaKnown RBP18.76■□□□□ 0.59
CDH11-210ENST00000564770 NMIQ13287 307 aaPredicted RBP18.76■□□□□ 0.59
CDH11-210ENST00000564770 TBC1D10CQ8IV04 446 aa18.76■□□□□ 0.59
CDH11-210ENST00000564770 VWCEQ96DN2 955 aa18.76■□□□□ 0.59
CDH11-210ENST00000564770 NOC4LQ9BVI4 516 aaKnown RBP18.76■□□□□ 0.59
CDH11-210ENST00000564770 GPCPD1Q9NPB8 672 aa18.76■□□□□ 0.59
CDH11-210ENST00000564770 PTPRSQ13332 1948 aa18.76■□□□□ 0.59
CDH11-210ENST00000564770 KIAA1217Q5T5P2 1943 aa18.75■□□□□ 0.59
CDH11-210ENST00000564770 CCL23P55773 120 aa18.75■□□□□ 0.59
CDH11-210ENST00000564770 MCMDC2Q4G0Z9 681 aa18.75■□□□□ 0.59
CDH11-210ENST00000564770 IQSEC1Q6DN90 963 aa18.75■□□□□ 0.59
CDH11-210ENST00000564770 KIAA1211Q6ZU35 1233 aa18.75■□□□□ 0.59
CDH11-210ENST00000564770 CLEC4DQ8WXI8 215 aa18.75■□□□□ 0.59
CDH11-210ENST00000564770 HERVK_113Q902F9 699 aa18.75■□□□□ 0.59
CDH11-210ENST00000564770 Q9Y3F1 56 aa18.75■□□□□ 0.59
CDH11-210ENST00000564770 NEDD4P46934 1319 aa18.74■□□□□ 0.59
CDH11-210ENST00000564770 CCDC171Q6TFL3 1326 aa18.74■□□□□ 0.59
CDH11-210ENST00000564770 HDAC1Q13547 482 aaPredicted RBP18.74■□□□□ 0.59
CDH11-210ENST00000564770 DUSP28Q4G0W2 176 aa18.74■□□□□ 0.59
CDH11-210ENST00000564770 PRDM12Q9H4Q4 367 aa18.74■□□□□ 0.59
CDH11-210ENST00000564770 PRDM6Q9NQX0 595 aa18.74■□□□□ 0.59
CDH11-210ENST00000564770 TCP11L1Q9NUJ3 509 aa18.74■□□□□ 0.59
CDH11-210ENST00000564770 YBX2Q9Y2T7 364 aaKnown RBP18.74■□□□□ 0.59
CDH11-210ENST00000564770 PTPDC1A2A3K4 754 aa18.73■□□□□ 0.59
CDH11-210ENST00000564770 SNHG28P0DPA3 235 aa18.73■□□□□ 0.59
CDH11-210ENST00000564770 ZNF543Q08ER8 600 aa18.73■□□□□ 0.59
CDH11-210ENST00000564770 SCLYQ96I15 445 aa18.73■□□□□ 0.59
CDH11-210ENST00000564770 ADD3Q9UEY8 706 aaKnown RBP18.73■□□□□ 0.59
CDH11-210ENST00000564770 ZBTB47Q9UFB7 747 aaPredicted RBP18.73■□□□□ 0.59
CDH11-210ENST00000564770 ZEB2O60315 1214 aa18.72■□□□□ 0.59
CDH11-210ENST00000564770 CALML3P27482 149 aa18.72■□□□□ 0.59
CDH11-210ENST00000564770 PURAQ00577 322 aaKnown RBP18.72■□□□□ 0.59
CDH11-210ENST00000564770 ADGRE1Q14246 886 aa18.72■□□□□ 0.59
CDH11-210ENST00000564770 OTOP2Q7RTS6 562 aa18.72■□□□□ 0.59
CDH11-210ENST00000564770 PPP1R13LQ8WUF5 828 aa18.72■□□□□ 0.59
CDH11-210ENST00000564770 WDR11Q9BZH6 1224 aa18.72■□□□□ 0.59
CDH11-210ENST00000564770 LNPKQ9C0E8 428 aa18.72■□□□□ 0.59
CDH11-210ENST00000564770 ALDH8A1Q9H2A2 487 aaPredicted RBP18.72■□□□□ 0.59
CDH11-210ENST00000564770 CPVLQ9H3G5 476 aa18.72■□□□□ 0.59
CDH11-210ENST00000564770 TRMT13Q9NUP7 481 aaKnown RBP18.72■□□□□ 0.59
CDH11-210ENST00000564770 TET1Q8NFU7 2136 aa18.71■□□□□ 0.59
CDH11-210ENST00000564770 RBM47A0AV96 593 aaKnown RBP18.71■□□□□ 0.59
CDH11-210ENST00000564770 FGBP02675 491 aa18.71■□□□□ 0.59
CDH11-210ENST00000564770 EDNRBP24530 442 aa18.71■□□□□ 0.59
CDH11-210ENST00000564770 RPS6P62753 249 aaKnown RBP18.71■□□□□ 0.59
CDH11-210ENST00000564770 AKNAD1Q5T1N1 836 aa18.71■□□□□ 0.59
CDH11-210ENST00000564770 RNF207Q6ZRF8 634 aa18.71■□□□□ 0.59
CDH11-210ENST00000564770 NKX2-4Q9H2Z4 354 aa18.71■□□□□ 0.59
CDH11-210ENST00000564770 WDR19Q8NEZ3 1342 aa18.71■□□□□ 0.59
CDH11-210ENST00000564770 COL4A4P53420 1690 aaPredicted RBP18.7■□□□□ 0.58
CDH11-210ENST00000564770 TRIP12Q14669 1992 aaPredicted RBP18.7■□□□□ 0.58
CDH11-210ENST00000564770 LOC102724159A0A0B4J2E5 919 aa18.7■□□□□ 0.58
CDH11-210ENST00000564770 CYP2C9P11712 490 aa18.7■□□□□ 0.58
CDH11-210ENST00000564770 PWP2Q15269 919 aaKnown RBP18.7■□□□□ 0.58
CDH11-210ENST00000564770 RAB30Q15771 203 aa18.7■□□□□ 0.58
CDH11-210ENST00000564770 OR6J1Q8NGC5 347 aa18.7■□□□□ 0.58
CDH11-210ENST00000564770 COPS5Q92905 334 aa18.7■□□□□ 0.58
CDH11-210ENST00000564770 GAS2L1Q99501 681 aaPredicted RBP18.7■□□□□ 0.58
CDH11-210ENST00000564770 ZKSCAN3Q9BRR0 538 aa18.7■□□□□ 0.58
CDH11-210ENST00000564770 SEZ6LQ9BYH1 1024 aa18.7■□□□□ 0.58
CDH11-210ENST00000564770 TNKSO95271 1327 aa18.7■□□□□ 0.58
CDH11-210ENST00000564770 TRIM6-TRIM34B2RNG4 842 aa18.69■□□□□ 0.58
CDH11-210ENST00000564770 MYL3P08590 195 aa18.69■□□□□ 0.58
CDH11-210ENST00000564770 GOLGA8HP0CJ92 632 aa18.69■□□□□ 0.58
CDH11-210ENST00000564770 CPT1AP50416 773 aa18.69■□□□□ 0.58
CDH11-210ENST00000564770 RABGGTBP53611 331 aa18.69■□□□□ 0.58
CDH11-210ENST00000564770 MFSD6Q6ZSS7 791 aa18.69■□□□□ 0.58
CDH11-210ENST00000564770 POLR3EQ9NVU0 708 aa18.69■□□□□ 0.58
CDH11-210ENST00000564770 ARIH2O95376 493 aa18.68■□□□□ 0.58
CDH11-210ENST00000564770 MYOGP15173 224 aa18.68■□□□□ 0.58
CDH11-210ENST00000564770 PPP2R5BQ15173 497 aa18.68■□□□□ 0.58
CDH11-210ENST00000564770 USH1GQ495M9 461 aa18.68■□□□□ 0.58
CDH11-210ENST00000564770 TJAP1Q5JTD0 557 aa18.68■□□□□ 0.58
CDH11-210ENST00000564770 TICAM2Q86XR7 235 aa18.68■□□□□ 0.58
CDH11-210ENST00000564770 PPM1EQ8WY54 764 aa18.68■□□□□ 0.58
CDH11-210ENST00000564770 RILPL2Q969X0 211 aa18.68■□□□□ 0.58
CDH11-210ENST00000564770 TTC14Q96N46 770 aa18.68■□□□□ 0.58
CDH11-210ENST00000564770 MTIF3Q9H2K0 278 aaKnown RBP18.68■□□□□ 0.58
CDH11-210ENST00000564770 MSRAQ9UJ68 235 aa18.68■□□□□ 0.58
CDH11-210ENST00000564770 PCP11498 1178 aaKnown RBP18.67■□□□□ 0.58
CDH11-210ENST00000564770 PDE4DQ08499 809 aa18.67■□□□□ 0.58
CDH11-210ENST00000564770 TTLL4Q14679 1199 aa18.67■□□□□ 0.58
CDH11-210ENST00000564770 SMC5Q8IY18 1101 aa18.67■□□□□ 0.58
CDH11-210ENST00000564770 MTG1Q9BT17 334 aaPredicted RBP18.67■□□□□ 0.58
CDH11-210ENST00000564770 BDP1A6H8Y1 2624 aa18.67■□□□□ 0.58
CDH11-210ENST00000564770 SDSP20132 328 aa18.66■□□□□ 0.58
CDH11-210ENST00000564770 NBPF20Q3BBV1 942 aa18.66■□□□□ 0.58
CDH11-210ENST00000564770 B4GALNT3Q6L9W6 998 aa18.66■□□□□ 0.58
CDH11-210ENST00000564770 SCFD2Q8WU76 684 aa18.66■□□□□ 0.58
CDH11-210ENST00000564770 UBA5Q9GZZ9 404 aa18.66■□□□□ 0.58
CDH11-210ENST00000564770 SLC28A3Q9HAS3 691 aa18.66■□□□□ 0.58
CDH11-210ENST00000564770 COL20A1Q9P218 1284 aa18.66■□□□□ 0.58
CDH11-210ENST00000564770 SLC4A7Q9Y6M7 1214 aa18.66■□□□□ 0.58
CDH11-210ENST00000564770 MYH7BA7E2Y1 1941 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms