RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 NFIBO00712 420 aa16.63■□□□□ 0.25
CDR2-204ENST00000564542 TOP1P11387 765 aaKnown RBP16.63■□□□□ 0.25
CDR2-204ENST00000564542 SLC16A2P36021 539 aa16.63■□□□□ 0.25
CDR2-204ENST00000564542 ADGRE1Q14246 886 aa16.63■□□□□ 0.25
CDR2-204ENST00000564542 RPUSD2Q8IZ73 545 aaKnown RBP16.63■□□□□ 0.25
CDR2-204ENST00000564542 ATXN2LQ8WWM7 1075 aaKnown RBP16.63■□□□□ 0.25
CDR2-204ENST00000564542 PPM1EQ8WY54 764 aa16.63■□□□□ 0.25
CDR2-204ENST00000564542 EVI5LQ96CN4 794 aa16.63■□□□□ 0.25
CDR2-204ENST00000564542 NKX2-4Q9H2Z4 354 aa16.63■□□□□ 0.25
CDR2-204ENST00000564542 SLC28A3Q9HAS3 691 aa16.63■□□□□ 0.25
CDR2-204ENST00000564542 HELLSQ9NRZ9 838 aa16.63■□□□□ 0.25
CDR2-204ENST00000564542 POLR3EQ9NVU0 708 aa16.63■□□□□ 0.25
CDR2-204ENST00000564542 YBX2Q9Y2T7 364 aaKnown RBP16.63■□□□□ 0.25
CDR2-204ENST00000564542 TNFRSF10AO00220 468 aa16.62■□□□□ 0.25
CDR2-204ENST00000564542 CPT1AP50416 773 aa16.62■□□□□ 0.25
CDR2-204ENST00000564542 TTBK2Q6IQ55 1244 aa16.62■□□□□ 0.25
CDR2-204ENST00000564542 TMEM47Q9BQJ4 181 aa16.62■□□□□ 0.25
CDR2-204ENST00000564542 WDR11Q9BZH6 1224 aa16.62■□□□□ 0.25
CDR2-204ENST00000564542 TOMM22Q9NS69 142 aa16.62■□□□□ 0.25
CDR2-204ENST00000564542 PNMA2Q9UL42 364 aa16.62■□□□□ 0.25
CDR2-204ENST00000564542 SLC4A7Q9Y6M7 1214 aa16.62■□□□□ 0.25
CDR2-204ENST00000564542 ZMYM6O95789 1325 aa16.62■□□□□ 0.25
CDR2-204ENST00000564542 RBM47A0AV96 593 aaKnown RBP16.61■□□□□ 0.25
CDR2-204ENST00000564542 PTPDC1A2A3K4 754 aa16.61■□□□□ 0.25
CDR2-204ENST00000564542 PFKMP08237 780 aa16.61■□□□□ 0.25
CDR2-204ENST00000564542 SUPT20HL2P0C7V6 817 aa16.61■□□□□ 0.25
CDR2-204ENST00000564542 PURAQ00577 322 aaKnown RBP16.61■□□□□ 0.25
CDR2-204ENST00000564542 RRP12Q5JTH9 1297 aaKnown RBP16.61■□□□□ 0.25
CDR2-204ENST00000564542 SLC30A10Q6XR72 485 aa16.61■□□□□ 0.25
CDR2-204ENST00000564542 VWCEQ96DN2 955 aa16.61■□□□□ 0.25
CDR2-204ENST00000564542 TCP11L1Q9NUJ3 509 aa16.61■□□□□ 0.25
CDR2-204ENST00000564542 TRMT13Q9NUP7 481 aaKnown RBP16.61■□□□□ 0.25
CDR2-204ENST00000564542 ZBTB47Q9UFB7 747 aaPredicted RBP16.61■□□□□ 0.25
CDR2-204ENST00000564542 TNKSO95271 1327 aa16.61■□□□□ 0.25
CDR2-204ENST00000564542 FRMPD2Q68DX3 1309 aaPredicted RBP16.61■□□□□ 0.25
CDR2-204ENST00000564542 TRANK1O15050 2925 aa16.61■□□□□ 0.25
CDR2-204ENST00000564542 TANC1Q9C0D5 1861 aa16.61■□□□□ 0.25
CDR2-204ENST00000564542 SCN10AQ9Y5Y9 1956 aa16.6■□□□□ 0.25
CDR2-204ENST00000564542 FGAP02671 866 aa16.6■□□□□ 0.25
CDR2-204ENST00000564542 PDHBP11177 359 aa16.6■□□□□ 0.25
CDR2-204ENST00000564542 IGFBP4P22692 258 aa16.6■□□□□ 0.25
CDR2-204ENST00000564542 PPP2R2DQ66LE6 453 aa16.6■□□□□ 0.25
CDR2-204ENST00000564542 RNF207Q6ZRF8 634 aa16.6■□□□□ 0.25
CDR2-204ENST00000564542 TICAM2Q86XR7 235 aa16.6■□□□□ 0.25
CDR2-204ENST00000564542 OR6J1Q8NGC5 347 aa16.6■□□□□ 0.25
CDR2-204ENST00000564542 CLEC4DQ8WXI8 215 aa16.6■□□□□ 0.25
CDR2-204ENST00000564542 SCLYQ96I15 445 aa16.6■□□□□ 0.25
CDR2-204ENST00000564542 ASB2Q96Q27 587 aa16.6■□□□□ 0.25
CDR2-204ENST00000564542 MPHOSPH6Q99547 160 aaKnown RBP16.6■□□□□ 0.25
CDR2-204ENST00000564542 GPCPD1Q9NPB8 672 aa16.6■□□□□ 0.25
CDR2-204ENST00000564542 PCDHA11Q9Y5I1 949 aa16.6■□□□□ 0.25
CDR2-204ENST00000564542 REV3LO60673 3130 aa16.6■□□□□ 0.25
CDR2-204ENST00000564542 A0A0D9SFI3 127 aa16.59■□□□□ 0.25
CDR2-204ENST00000564542 ZBBXA8MT70 800 aa16.59■□□□□ 0.25
CDR2-204ENST00000564542 MYL3P08590 195 aa16.59■□□□□ 0.25
CDR2-204ENST00000564542 CALML3P27482 149 aa16.59■□□□□ 0.25
CDR2-204ENST00000564542 RABGGTBP53611 331 aa16.59■□□□□ 0.25
CDR2-204ENST00000564542 PPP2R5BQ15173 497 aa16.59■□□□□ 0.25
CDR2-204ENST00000564542 MCMDC2Q4G0Z9 681 aa16.59■□□□□ 0.25
CDR2-204ENST00000564542 BRDTQ58F21 947 aaPredicted RBP16.59■□□□□ 0.25
CDR2-204ENST00000564542 FAM227BQ96M60 508 aa16.59■□□□□ 0.25
CDR2-204ENST00000564542 MTG1Q9BT17 334 aaPredicted RBP16.59■□□□□ 0.25
CDR2-204ENST00000564542 GPHNQ9NQX3 736 aaPredicted RBP16.59■□□□□ 0.25
CDR2-204ENST00000564542 WDR19Q8NEZ3 1342 aa16.59■□□□□ 0.25
CDR2-204ENST00000564542 RAD50Q92878 1312 aa16.59■□□□□ 0.25
CDR2-204ENST00000564542 NKRFO15226 690 aaKnown RBP eCLIP16.58■□□□□ 0.24
CDR2-204ENST00000564542 SNHG28P0DPA3 235 aa16.58■□□□□ 0.24
CDR2-204ENST00000564542 HSPD1P10809 573 aaKnown RBP16.58■□□□□ 0.24
CDR2-204ENST00000564542 PCP11498 1178 aaKnown RBP16.58■□□□□ 0.24
CDR2-204ENST00000564542 CYP2C9P11712 490 aa16.58■□□□□ 0.24
CDR2-204ENST00000564542 ATP2A2P16615 1042 aaKnown RBP16.58■□□□□ 0.24
CDR2-204ENST00000564542 EDNRBP24530 442 aa16.58■□□□□ 0.24
CDR2-204ENST00000564542 PDE1AP54750 535 aa16.58■□□□□ 0.24
CDR2-204ENST00000564542 RPS6P62753 249 aaKnown RBP16.58■□□□□ 0.24
CDR2-204ENST00000564542 MRPS5P82675 430 aaKnown RBP16.58■□□□□ 0.24
CDR2-204ENST00000564542 PDE4DQ08499 809 aa16.58■□□□□ 0.24
CDR2-204ENST00000564542 ZNF543Q08ER8 600 aa16.58■□□□□ 0.24
CDR2-204ENST00000564542 CCDC85BQ15834 202 aaPredicted RBP16.58■□□□□ 0.24
CDR2-204ENST00000564542 ANKRD45Q5TZF3 282 aa16.58■□□□□ 0.24
CDR2-204ENST00000564542 SCFD2Q8WU76 684 aa16.58■□□□□ 0.24
CDR2-204ENST00000564542 MYO9BQ13459 2157 aa16.58■□□□□ 0.24
CDR2-204ENST00000564542 XIRP2A4UGR9 3374 aa16.58■□□□□ 0.24
CDR2-204ENST00000564542 SCN5AQ14524 2016 aa16.57■□□□□ 0.24
CDR2-204ENST00000564542 A6NJR5 290 aa16.57■□□□□ 0.24
CDR2-204ENST00000564542 MYOGP15173 224 aa16.57■□□□□ 0.24
CDR2-204ENST00000564542 RFC2P35250 354 aa16.57■□□□□ 0.24
CDR2-204ENST00000564542 TTLL4Q14679 1199 aa16.57■□□□□ 0.24
CDR2-204ENST00000564542 NFRKBQ6P4R8 1299 aa16.57■□□□□ 0.24
CDR2-204ENST00000564542 ZNF589Q86UQ0 364 aaPredicted RBP16.57■□□□□ 0.24
CDR2-204ENST00000564542 DNERQ8NFT8 737 aa16.57■□□□□ 0.24
CDR2-204ENST00000564542 ADAMTS19Q8TE59 1207 aa16.57■□□□□ 0.24
CDR2-204ENST00000564542 TTC14Q96N46 770 aa16.57■□□□□ 0.24
CDR2-204ENST00000564542 CCDC171Q6TFL3 1326 aa16.56■□□□□ 0.24
CDR2-204ENST00000564542 PITPNM1O00562 1244 aa16.56■□□□□ 0.24
CDR2-204ENST00000564542 KPNA6O60684 536 aa16.56■□□□□ 0.24
CDR2-204ENST00000564542 ACTN1P12814 892 aa16.56■□□□□ 0.24
CDR2-204ENST00000564542 HAND2P61296 217 aa16.56■□□□□ 0.24
CDR2-204ENST00000564542 PTPN11Q06124 597 aaPredicted RBP16.56■□□□□ 0.24
CDR2-204ENST00000564542 NBPF20Q3BBV1 942 aa16.56■□□□□ 0.24
CDR2-204ENST00000564542 FAM47CQ5HY64 1035 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms