RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 Q7L0L9 218 aa17.56■□□□□ 0.4
SPG7-210ENST00000564409 SLC43A3Q8NBI5 491 aa17.56■□□□□ 0.4
SPG7-210ENST00000564409 ZKSCAN3Q9BRR0 538 aa17.56■□□□□ 0.4
SPG7-210ENST00000564409 UBAC1Q9BSL1 405 aa17.56■□□□□ 0.4
SPG7-210ENST00000564409 RBM47A0AV96 593 aaKnown RBP17.55■□□□□ 0.4
SPG7-210ENST00000564409 NKRFO15226 690 aaKnown RBP eCLIP17.55■□□□□ 0.4
SPG7-210ENST00000564409 DYNC1LI2O43237 492 aaPredicted RBP17.55■□□□□ 0.4
SPG7-210ENST00000564409 ZNF697Q5TEC3 545 aa17.55■□□□□ 0.4
SPG7-210ENST00000564409 MFSD5Q6N075 450 aa17.55■□□□□ 0.4
SPG7-210ENST00000564409 FBXO16Q8IX29 292 aaPredicted RBP17.55■□□□□ 0.4
SPG7-210ENST00000564409 FAM126BQ8IXS8 530 aa17.55■□□□□ 0.4
SPG7-210ENST00000564409 ENAHQ8N8S7 591 aaPredicted RBP17.55■□□□□ 0.4
SPG7-210ENST00000564409 CALML3P27482 149 aa17.54■□□□□ 0.4
SPG7-210ENST00000564409 RPS6P62753 249 aaKnown RBP17.54■□□□□ 0.4
SPG7-210ENST00000564409 IRX5P78411 483 aaPredicted RBP17.54■□□□□ 0.4
SPG7-210ENST00000564409 BEX3Q00994 111 aa17.54■□□□□ 0.4
SPG7-210ENST00000564409 PDE4DQ08499 809 aa17.54■□□□□ 0.4
SPG7-210ENST00000564409 PPIGQ13427 754 aaKnown RBP eCLIP17.54■□□□□ 0.46e-9■■■□□ 14.6
SPG7-210ENST00000564409 BRDTQ58F21 947 aaPredicted RBP17.54■□□□□ 0.4
SPG7-210ENST00000564409 EEPD1Q7L9B9 569 aa17.54■□□□□ 0.4
SPG7-210ENST00000564409 TMEM199Q8N511 208 aa17.54■□□□□ 0.4
SPG7-210ENST00000564409 SLC17A8Q8NDX2 589 aa17.54■□□□□ 0.4
SPG7-210ENST00000564409 RNPC3Q96LT9 517 aaKnown RBP17.54■□□□□ 0.4
SPG7-210ENST00000564409 WDR11Q9BZH6 1224 aa17.54■□□□□ 0.4
SPG7-210ENST00000564409 PDGFCQ9NRA1 345 aa17.54■□□□□ 0.4
SPG7-210ENST00000564409 POLR3EQ9NVU0 708 aa17.54■□□□□ 0.4
SPG7-210ENST00000564409 TNKSO95271 1327 aa17.53■□□□□ 0.4
SPG7-210ENST00000564409 ABCB11O95342 1321 aa17.53■□□□□ 0.4
SPG7-210ENST00000564409 TMEM265A0A087WTH1 108 aa17.53■□□□□ 0.4
SPG7-210ENST00000564409 CD4P01730 458 aa17.53■□□□□ 0.4
SPG7-210ENST00000564409 PARP1P09874 1014 aaKnown RBP17.53■□□□□ 0.4
SPG7-210ENST00000564409 GOLGA8HP0CJ92 632 aa17.53■□□□□ 0.4
SPG7-210ENST00000564409 EDNRBP24530 442 aa17.53■□□□□ 0.4
SPG7-210ENST00000564409 CPT1AP50416 773 aa17.53■□□□□ 0.4
SPG7-210ENST00000564409 TRDNQ13061 729 aa17.53■□□□□ 0.4
SPG7-210ENST00000564409 ITGA7Q13683 1181 aa17.53■□□□□ 0.4
SPG7-210ENST00000564409 CXCL17Q6UXB2 119 aa17.53■□□□□ 0.4
SPG7-210ENST00000564409 MCF2L2Q86YR7 1114 aa17.53■□□□□ 0.4
SPG7-210ENST00000564409 SCFD2Q8WU76 684 aa17.53■□□□□ 0.4
SPG7-210ENST00000564409 U3KPZ7 1027 aaPredicted RBP17.53■□□□□ 0.4
SPG7-210ENST00000564409 KPNA6O60684 536 aa17.52■□□□□ 0.4
SPG7-210ENST00000564409 PDE4AP27815 886 aa17.52■□□□□ 0.4
SPG7-210ENST00000564409 CDC37Q16543 378 aaPredicted RBP17.52■□□□□ 0.4
SPG7-210ENST00000564409 IFIT1BQ5T764 474 aaKnown RBP17.52■□□□□ 0.4
SPG7-210ENST00000564409 SLC30A10Q6XR72 485 aa17.52■□□□□ 0.4
SPG7-210ENST00000564409 ADGRF4Q8IZF3 695 aa17.52■□□□□ 0.4
SPG7-210ENST00000564409 PURBQ96QR8 312 aaKnown RBP17.52■□□□□ 0.4
SPG7-210ENST00000564409 GSPT1P15170 499 aaKnown RBP17.51■□□□□ 0.39
SPG7-210ENST00000564409 EPHB4P54760 987 aa17.51■□□□□ 0.39
SPG7-210ENST00000564409 TRAF1Q13077 416 aa17.51■□□□□ 0.39
SPG7-210ENST00000564409 USH1GQ495M9 461 aa17.51■□□□□ 0.39
SPG7-210ENST00000564409 UBA5Q9GZZ9 404 aa17.51■□□□□ 0.39
SPG7-210ENST00000564409 MRPL11Q9Y3B7 192 aaKnown RBP17.51■□□□□ 0.39
SPG7-210ENST00000564409 KIAA1217Q5T5P2 1943 aa17.51■□□□□ 0.39
SPG7-210ENST00000564409 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.5■□□□□ 0.39
SPG7-210ENST00000564409 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.5■□□□□ 0.39
SPG7-210ENST00000564409 SUPT20HL2P0C7V6 817 aa17.5■□□□□ 0.39
SPG7-210ENST00000564409 CHMLP26374 656 aa17.5■□□□□ 0.39
SPG7-210ENST00000564409 PPP2R5BQ15173 497 aa17.5■□□□□ 0.39
SPG7-210ENST00000564409 SEC23AQ15436 765 aa17.5■□□□□ 0.39
SPG7-210ENST00000564409 PSRC1Q6PGN9 363 aaPredicted RBP17.5■□□□□ 0.39
SPG7-210ENST00000564409 FBXO11Q86XK2 927 aa17.5■□□□□ 0.39
SPG7-210ENST00000564409 SAMD3Q8N6K7 520 aa17.5■□□□□ 0.39
SPG7-210ENST00000564409 NSUN6Q8TEA1 469 aaKnown RBP17.5■□□□□ 0.39
SPG7-210ENST00000564409 IWS1Q96ST2 819 aa17.5■□□□□ 0.39
SPG7-210ENST00000564409 GPHNQ9NQX3 736 aaPredicted RBP17.5■□□□□ 0.39
SPG7-210ENST00000564409 MAP3K20Q9NYL2 800 aaKnown RBP17.5■□□□□ 0.39
SPG7-210ENST00000564409 DDX49Q9Y6V7 483 aaKnown RBP17.5■□□□□ 0.39
SPG7-210ENST00000564409 SCN10AQ9Y5Y9 1956 aa17.49■□□□□ 0.39
SPG7-210ENST00000564409 DHX16O60231 1041 aaKnown RBP17.49■□□□□ 0.39
SPG7-210ENST00000564409 TTLL4Q14679 1199 aa17.49■□□□□ 0.39
SPG7-210ENST00000564409 QRICH1Q2TAL8 776 aa17.49■□□□□ 0.39
SPG7-210ENST00000564409 OR6J1Q8NGC5 347 aa17.49■□□□□ 0.39
SPG7-210ENST00000564409 GUCD1Q96NT3 240 aa17.49■□□□□ 0.39
SPG7-210ENST00000564409 MTG1Q9BT17 334 aaPredicted RBP17.49■□□□□ 0.39
SPG7-210ENST00000564409 SEMA6BQ9H3T3 888 aa17.49■□□□□ 0.39
SPG7-210ENST00000564409 JMJD4Q9H9V9 463 aa17.49■□□□□ 0.39
SPG7-210ENST00000564409 GRIN2DO15399 1336 aa17.48■□□□□ 0.39
SPG7-210ENST00000564409 ERICH2A1L162 156 aa17.48■□□□□ 0.39
SPG7-210ENST00000564409 A6NJR5 290 aa17.48■□□□□ 0.39
SPG7-210ENST00000564409 PURAQ00577 322 aaKnown RBP17.48■□□□□ 0.39
SPG7-210ENST00000564409 SART3Q15020 963 aaKnown RBP17.48■□□□□ 0.39
SPG7-210ENST00000564409 AMNQ9BXJ7 453 aa17.48■□□□□ 0.39
SPG7-210ENST00000564409 IL25Q9H293 177 aa17.48■□□□□ 0.39
SPG7-210ENST00000564409 MTIF3Q9H2K0 278 aaKnown RBP17.48■□□□□ 0.39
SPG7-210ENST00000564409 CPVLQ9H3G5 476 aa17.48■□□□□ 0.39
SPG7-210ENST00000564409 HIPK3Q9H422 1215 aa17.48■□□□□ 0.39
SPG7-210ENST00000564409 KLRF2D3W0D1 207 aa17.47■□□□□ 0.39
SPG7-210ENST00000564409 SGSM2O43147 1006 aa17.47■□□□□ 0.39
SPG7-210ENST00000564409 CYP21A2P08686 494 aa17.47■□□□□ 0.39
SPG7-210ENST00000564409 TXNP10599 105 aaKnown RBP17.47■□□□□ 0.39
SPG7-210ENST00000564409 CSF2RAP15509 400 aa17.47■□□□□ 0.39
SPG7-210ENST00000564409 GHRHRQ02643 423 aa17.47■□□□□ 0.39
SPG7-210ENST00000564409 STXBP2Q15833 593 aa17.47■□□□□ 0.39
SPG7-210ENST00000564409 TMEM240Q5SV17 173 aa17.47■□□□□ 0.39
SPG7-210ENST00000564409 RASIP1Q5U651 963 aa17.47■□□□□ 0.39
SPG7-210ENST00000564409 RALYLQ86SE5 291 aaKnown RBP17.47■□□□□ 0.39
SPG7-210ENST00000564409 NCOA7Q8NI08 942 aa17.47■□□□□ 0.39
SPG7-210ENST00000564409 SYTL5Q8TDW5 730 aaPredicted RBP17.47■□□□□ 0.39
SPG7-210ENST00000564409 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.47■□□□□ 0.392e-11■□□□□ 9.4
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms