RNA–Protein interactions for RNA: ENST00000564390.1

AC009041.3-201, humanhuman

TSL 5 BASIC

Gene AC009041.3, Length 879 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.3-201ENST00000564390 ASGR1P07306 291 aa29.48■■■□□ 2.31
AC009041.3-201ENST00000564390 SMPD1P17405 629 aa29.48■■■□□ 2.31
AC009041.3-201ENST00000564390 GNASQ5JWF2 1037 aa29.48■■■□□ 2.31
AC009041.3-201ENST00000564390 C1orf53Q5VUE5 145 aa29.48■■■□□ 2.31
AC009041.3-201ENST00000564390 SH3RF1Q7Z6J0 888 aa29.48■■■□□ 2.31
AC009041.3-201ENST00000564390 LBHD1Q9BQE6 289 aaPredicted RBP29.48■■■□□ 2.31
AC009041.3-201ENST00000564390 VTA1Q9NP79 307 aa29.48■■■□□ 2.31
AC009041.3-201ENST00000564390 ANO2Q9NQ90 1003 aa29.48■■■□□ 2.31
AC009041.3-201ENST00000564390 GNEQ9Y223 722 aaKnown RBP29.48■■■□□ 2.31
AC009041.3-201ENST00000564390 SART3Q15020 963 aaKnown RBP29.47■■■□□ 2.31
AC009041.3-201ENST00000564390 TMEM67Q5HYA8 995 aa29.47■■■□□ 2.31
AC009041.3-201ENST00000564390 FBXO11Q86XK2 927 aa29.47■■■□□ 2.31
AC009041.3-201ENST00000564390 NUP133Q8WUM0 1156 aa29.47■■■□□ 2.31
AC009041.3-201ENST00000564390 TBC1D5Q92609 795 aa29.47■■■□□ 2.31
AC009041.3-201ENST00000564390 GRM4Q14833 912 aa29.46■■■□□ 2.31
AC009041.3-201ENST00000564390 PCSK9Q8NBP7 692 aaKnown RBP29.46■■■□□ 2.31
AC009041.3-201ENST00000564390 GPHNQ9NQX3 736 aaPredicted RBP29.46■■■□□ 2.31
AC009041.3-201ENST00000564390 TRIM43BA6NCK2 446 aa29.45■■■□□ 2.31
AC009041.3-201ENST00000564390 PALM3A6NDB9 673 aaPredicted RBP29.45■■■□□ 2.31
AC009041.3-201ENST00000564390 SLC27A2O14975 620 aa29.45■■■□□ 2.31
AC009041.3-201ENST00000564390 COL9A3Q14050 684 aaPredicted RBP29.45■■■□□ 2.31
AC009041.3-201ENST00000564390 SLC35G1Q2M3R5 365 aa29.45■■■□□ 2.31
AC009041.3-201ENST00000564390 TDHQ8IZJ6 230 aa29.45■■■□□ 2.31
AC009041.3-201ENST00000564390 TRIM43Q96BQ3 446 aaPredicted RBP29.45■■■□□ 2.31
AC009041.3-201ENST00000564390 CCDC136Q96JN2 1154 aa29.45■■■□□ 2.31
AC009041.3-201ENST00000564390 GLT1D1Q96MS3 346 aa29.45■■■□□ 2.31
AC009041.3-201ENST00000564390 DYNC1LI2O43237 492 aaPredicted RBP29.44■■■□□ 2.3
AC009041.3-201ENST00000564390 PDE4DQ08499 809 aa29.44■■■□□ 2.3
AC009041.3-201ENST00000564390 IQSEC1Q6DN90 963 aa29.44■■■□□ 2.3
AC009041.3-201ENST00000564390 LRCH3Q96II8 777 aa29.44■■■□□ 2.3
AC009041.3-201ENST00000564390 AP5M1Q9H0R1 490 aa29.44■■■□□ 2.3
AC009041.3-201ENST00000564390 PPP1R11O60927 126 aaPredicted RBP29.43■■■□□ 2.3
AC009041.3-201ENST00000564390 CLTBP09497 229 aa29.43■■■□□ 2.3
AC009041.3-201ENST00000564390 CREB3L3Q68CJ9 461 aa29.43■■■□□ 2.3
AC009041.3-201ENST00000564390 HOMER1Q86YM7 354 aa29.43■■■□□ 2.3
AC009041.3-201ENST00000564390 IGDCC4Q8TDY8 1250 aa29.43■■■□□ 2.3
AC009041.3-201ENST00000564390 VTI1AQ96AJ9 217 aa29.43■■■□□ 2.3
AC009041.3-201ENST00000564390 COL20A1Q9P218 1284 aa29.43■■■□□ 2.3
AC009041.3-201ENST00000564390 LOC102724159A0A0B4J2E5 919 aa29.42■■■□□ 2.3
AC009041.3-201ENST00000564390 PRC1O43663 620 aa29.42■■■□□ 2.3
AC009041.3-201ENST00000564390 EDNRBP24530 442 aa29.42■■■□□ 2.3
AC009041.3-201ENST00000564390 NKX3-2P78367 333 aa29.42■■■□□ 2.3
AC009041.3-201ENST00000564390 TROAPQ12815 778 aa29.42■■■□□ 2.3
AC009041.3-201ENST00000564390 PWP2Q15269 919 aaKnown RBP29.42■■■□□ 2.3
AC009041.3-201ENST00000564390 FSCN1Q16658 493 aaKnown RBP29.42■■■□□ 2.3
AC009041.3-201ENST00000564390 RGS22Q8NE09 1264 aa29.42■■■□□ 2.3
AC009041.3-201ENST00000564390 DNERQ8NFT8 737 aa29.42■■■□□ 2.3
AC009041.3-201ENST00000564390 MYL10Q9BUA6 226 aa29.42■■■□□ 2.3
AC009041.3-201ENST00000564390 MRPL11Q9Y3B7 192 aaKnown RBP29.42■■■□□ 2.3
AC009041.3-201ENST00000564390 CXCL17Q6UXB2 119 aa29.41■■■□□ 2.3
AC009041.3-201ENST00000564390 CATIPQ7Z7H3 387 aa29.41■■■□□ 2.3
AC009041.3-201ENST00000564390 SYTL5Q8TDW5 730 aaPredicted RBP29.41■■■□□ 2.3
AC009041.3-201ENST00000564390 BADQ92934 168 aa29.41■■■□□ 2.3
AC009041.3-201ENST00000564390 MTMR8Q96EF0 704 aa29.41■■■□□ 2.3
AC009041.3-201ENST00000564390 AMNQ9BXJ7 453 aa29.41■■■□□ 2.3
AC009041.3-201ENST00000564390 WDR11Q9BZH6 1224 aa29.41■■■□□ 2.3
AC009041.3-201ENST00000564390 LY9Q9HBG7 655 aa29.41■■■□□ 2.3
AC009041.3-201ENST00000564390 LAMA3Q16787 3333 aa29.41■■■□□ 2.3
AC009041.3-201ENST00000564390 ELP1O95163 1332 aa29.41■■■□□ 2.3
AC009041.3-201ENST00000564390 SZT2Q5T011 3432 aa29.4■■■□□ 2.3
AC009041.3-201ENST00000564390 ZBTB5O15062 677 aa29.4■■■□□ 2.3
AC009041.3-201ENST00000564390 NECTIN1Q15223 517 aa29.4■■■□□ 2.3
AC009041.3-201ENST00000564390 DUSP28Q4G0W2 176 aa29.4■■■□□ 2.3
AC009041.3-201ENST00000564390 CASC1Q6TDU7 716 aa29.4■■■□□ 2.3
AC009041.3-201ENST00000564390 TAAR1Q96RJ0 339 aa29.4■■■□□ 2.3
AC009041.3-201ENST00000564390 PIGSQ96S52 555 aa29.4■■■□□ 2.3
AC009041.3-201ENST00000564390 MPHOSPH6Q99547 160 aaKnown RBP29.4■■■□□ 2.3
AC009041.3-201ENST00000564390 A0A0U1RQG5 324 aaPredicted RBP29.39■■■□□ 2.3
AC009041.3-201ENST00000564390 OPLAHO14841 1288 aa29.39■■■□□ 2.3
AC009041.3-201ENST00000564390 ITGB8P26012 769 aa29.39■■■□□ 2.3
AC009041.3-201ENST00000564390 ANKRD33Q7Z3H0 272 aa29.39■■■□□ 2.3
AC009041.3-201ENST00000564390 MCF2L2Q86YR7 1114 aa29.39■■■□□ 2.3
AC009041.3-201ENST00000564390 DCDC2CA8MYV0 355 aa29.38■■■□□ 2.29
AC009041.3-201ENST00000564390 CYTH3O43739 400 aa29.38■■■□□ 2.29
AC009041.3-201ENST00000564390 CDC45O75419 566 aa29.38■■■□□ 2.29
AC009041.3-201ENST00000564390 CFBP00751 764 aa29.38■■■□□ 2.29
AC009041.3-201ENST00000564390 FAAP100Q0VG06 881 aa29.38■■■□□ 2.29
AC009041.3-201ENST00000564390 ZNF654Q8IZM8 581 aa29.38■■■□□ 2.29
AC009041.3-201ENST00000564390 PIBF1Q8WXW3 757 aa29.38■■■□□ 2.29
AC009041.3-201ENST00000564390 RBM47A0AV96 593 aaKnown RBP29.37■■■□□ 2.29
AC009041.3-201ENST00000564390 MCM5P33992 734 aa29.37■■■□□ 2.29
AC009041.3-201ENST00000564390 RIOX1Q9H6W3 641 aa29.37■■■□□ 2.29
AC009041.3-201ENST00000564390 TMEM39AQ9NV64 488 aa29.37■■■□□ 2.29
AC009041.3-201ENST00000564390 Q9Y3F1 56 aa29.37■■■□□ 2.29
AC009041.3-201ENST00000564390 PCDHA1Q9Y5I3 950 aa29.37■■■□□ 2.29
AC009041.3-201ENST00000564390 ARVCFO00192 962 aa29.36■■■□□ 2.29
AC009041.3-201ENST00000564390 SH2B2O14492 632 aaPredicted RBP29.36■■■□□ 2.29
AC009041.3-201ENST00000564390 KIAA0355O15063 1070 aa29.36■■■□□ 2.29
AC009041.3-201ENST00000564390 CDK7P50613 346 aa29.36■■■□□ 2.29
AC009041.3-201ENST00000564390 PPP2R5BQ15173 497 aa29.36■■■□□ 2.29
AC009041.3-201ENST00000564390 NFXL1Q6ZNB6 911 aa29.36■■■□□ 2.29
AC009041.3-201ENST00000564390 OR6J1Q8NGC5 347 aa29.36■■■□□ 2.29
AC009041.3-201ENST00000564390 TOX2Q96NM4 488 aa29.36■■■□□ 2.29
AC009041.3-201ENST00000564390 RMDN3Q96TC7 470 aa29.36■■■□□ 2.29
AC009041.3-201ENST00000564390 LRRC2Q9BYS8 371 aa29.36■■■□□ 2.29
AC009041.3-201ENST00000564390 B4DLN1 442 aa29.35■■■□□ 2.29
AC009041.3-201ENST00000564390 RAG1P15918 1043 aa29.35■■■□□ 2.29
AC009041.3-201ENST00000564390 EIF2AK2P19525 551 aaKnown RBP29.35■■■□□ 2.29
AC009041.3-201ENST00000564390 MRPL12P52815 198 aaKnown RBP29.35■■■□□ 2.29
AC009041.3-201ENST00000564390 NSUN6Q8TEA1 469 aaKnown RBP29.35■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms