RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 ALDH3A1P30838 453 aa13.87□□□□□ -0.19
COMMD4-209ENST00000564068 GYG1P46976 350 aa13.87□□□□□ -0.19
COMMD4-209ENST00000564068 CCDC93Q567U6 631 aa13.87□□□□□ -0.19
COMMD4-209ENST00000564068 C6orf163Q5TEZ5 329 aa13.87□□□□□ -0.19
COMMD4-209ENST00000564068 TBC1D1Q86TI0 1168 aaPredicted RBP13.87□□□□□ -0.19
COMMD4-209ENST00000564068 MYOCDQ8IZQ8 938 aa13.87□□□□□ -0.19
COMMD4-209ENST00000564068 STRBPQ96SI9 672 aaKnown RBP13.87□□□□□ -0.19
COMMD4-209ENST00000564068 NUCKS1Q9H1E3 243 aaKnown RBP13.87□□□□□ -0.19
COMMD4-209ENST00000564068 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.87□□□□□ -0.19
COMMD4-209ENST00000564068 PLAAQ9Y263 795 aa13.87□□□□□ -0.19
COMMD4-209ENST00000564068 PCDHB13Q9Y5F0 798 aa13.87□□□□□ -0.19
COMMD4-209ENST00000564068 F8W031 263 aaPredicted RBP13.87□□□□□ -0.19
COMMD4-209ENST00000564068 UBE2Q2LH0YL09 131 aa13.87□□□□□ -0.19
COMMD4-209ENST00000564068 RPL13P26373 211 aaKnown RBP13.87□□□□□ -0.19
COMMD4-209ENST00000564068 TAOK1Q7L7X3 1001 aa13.87□□□□□ -0.19
COMMD4-209ENST00000564068 KRT25Q7Z3Z0 450 aa13.87□□□□□ -0.19
COMMD4-209ENST00000564068 ZNF579Q8NAF0 562 aaKnown RBP13.87□□□□□ -0.19
COMMD4-209ENST00000564068 SPATA4Q8NEY3 305 aa13.87□□□□□ -0.19
COMMD4-209ENST00000564068 DHTKD1Q96HY7 919 aaPredicted RBP13.87□□□□□ -0.19
COMMD4-209ENST00000564068 SENP2Q9HC62 589 aa13.87□□□□□ -0.19
COMMD4-209ENST00000564068 SMARCAL1Q9NZC9 954 aa13.87□□□□□ -0.19
COMMD4-209ENST00000564068 TFCP2L1Q9NZI6 479 aa13.87□□□□□ -0.19
COMMD4-209ENST00000564068 FBXO2Q9UK22 296 aaPredicted RBP13.87□□□□□ -0.19
COMMD4-209ENST00000564068 AMFRQ9UKV5 643 aa13.87□□□□□ -0.19
COMMD4-209ENST00000564068 NEXMIFQ5QGS0 1516 aa13.87□□□□□ -0.19
COMMD4-209ENST00000564068 KRT14P02533 472 aa13.87□□□□□ -0.19
COMMD4-209ENST00000564068 EEF2P13639 858 aaKnown RBP13.87□□□□□ -0.19
COMMD4-209ENST00000564068 SLCO1A2P46721 670 aa13.87□□□□□ -0.19
COMMD4-209ENST00000564068 ZNF772Q68DY9 489 aaPredicted RBP13.87□□□□□ -0.19
COMMD4-209ENST00000564068 STXBP4Q6ZWJ1 553 aa13.87□□□□□ -0.19
COMMD4-209ENST00000564068 ZBTB38Q8NAP3 1195 aaPredicted RBP13.87□□□□□ -0.19
COMMD4-209ENST00000564068 ARHGEF2Q92974 986 aaKnown RBP13.87□□□□□ -0.19
COMMD4-209ENST00000564068 ERBB3P21860 1342 aa13.87□□□□□ -0.19
COMMD4-209ENST00000564068 CCDC160A6NGH7 325 aa13.86□□□□□ -0.19
COMMD4-209ENST00000564068 C6orf229H3BNL8 230 aa13.86□□□□□ -0.19
COMMD4-209ENST00000564068 HIP1RO75146 1068 aa13.86□□□□□ -0.19
COMMD4-209ENST00000564068 OR52Z1P0C646 297 aa13.86□□□□□ -0.19
COMMD4-209ENST00000564068 CCNE1P24864 410 aa13.86□□□□□ -0.19
COMMD4-209ENST00000564068 CCNI2Q6ZMN8 369 aaPredicted RBP13.86□□□□□ -0.19
COMMD4-209ENST00000564068 RSRC2Q7L4I2 434 aaKnown RBP13.86□□□□□ -0.19
COMMD4-209ENST00000564068 TEX11Q8IYF3 940 aa13.86□□□□□ -0.19
COMMD4-209ENST00000564068 PNMA1Q8ND90 353 aa13.86□□□□□ -0.19
COMMD4-209ENST00000564068 CUL5Q93034 780 aa13.86□□□□□ -0.19
COMMD4-209ENST00000564068 IQCDQ96DY2 449 aa13.86□□□□□ -0.19
COMMD4-209ENST00000564068 RAB17Q9H0T7 212 aa13.86□□□□□ -0.19
COMMD4-209ENST00000564068 CAMSAP1Q5T5Y3 1602 aa13.86□□□□□ -0.19
COMMD4-209ENST00000564068 FAM13AO94988 1023 aa13.86□□□□□ -0.19
COMMD4-209ENST00000564068 EPB41P11171 864 aaKnown RBP13.86□□□□□ -0.19
COMMD4-209ENST00000564068 VPS41P49754 854 aa13.86□□□□□ -0.19
COMMD4-209ENST00000564068 ADCY1Q08828 1119 aa13.86□□□□□ -0.19
COMMD4-209ENST00000564068 ZKSCAN8Q15776 578 aaPredicted RBP13.86□□□□□ -0.19
COMMD4-209ENST00000564068 LY9Q9HBG7 655 aa13.86□□□□□ -0.19
COMMD4-209ENST00000564068 IKBKGQ9Y6K9 419 aa13.86□□□□□ -0.19
COMMD4-209ENST00000564068 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.86□□□□□ -0.19
COMMD4-209ENST00000564068 H2AFZP0C0S5 128 aa13.86□□□□□ -0.19
COMMD4-209ENST00000564068 ARHGAP44Q17R89 818 aa13.86□□□□□ -0.19
COMMD4-209ENST00000564068 H2AFVQ71UI9 128 aa13.86□□□□□ -0.19
COMMD4-209ENST00000564068 REXO1Q8N1G1 1221 aaKnown RBP13.86□□□□□ -0.19
COMMD4-209ENST00000564068 NDST4Q9H3R1 872 aa13.86□□□□□ -0.19
COMMD4-209ENST00000564068 DENND2AQ9ULE3 1009 aa13.86□□□□□ -0.19
COMMD4-209ENST00000564068 H7C1W4 665 aa13.85□□□□□ -0.19
COMMD4-209ENST00000564068 MYO1FO00160 1098 aa13.85□□□□□ -0.19
COMMD4-209ENST00000564068 PCCAP05165 728 aaPredicted RBP13.85□□□□□ -0.19
COMMD4-209ENST00000564068 PLTPP55058 493 aa13.85□□□□□ -0.19
COMMD4-209ENST00000564068 OSBPL9Q96SU4 736 aa13.85□□□□□ -0.19
COMMD4-209ENST00000564068 AGLP35573 1532 aa13.85□□□□□ -0.19
COMMD4-209ENST00000564068 ANO9A1A5B4 782 aa13.85□□□□□ -0.19
COMMD4-209ENST00000564068 HNRNPH1P31943 449 aaKnown RBP13.85□□□□□ -0.19
COMMD4-209ENST00000564068 STX2P32856 288 aa13.85□□□□□ -0.19
COMMD4-209ENST00000564068 ZNF131P52739 623 aa13.85□□□□□ -0.19
COMMD4-209ENST00000564068 SEC24CP53992 1094 aa13.85□□□□□ -0.19
COMMD4-209ENST00000564068 ANTXR2P58335 489 aa13.85□□□□□ -0.19
COMMD4-209ENST00000564068 PPFIBP2Q8ND30 876 aa13.85□□□□□ -0.19
COMMD4-209ENST00000564068 ANKZF1Q9H8Y5 726 aa13.85□□□□□ -0.19
COMMD4-209ENST00000564068 MEFVO15553 781 aaPredicted RBP13.85□□□□□ -0.19
COMMD4-209ENST00000564068 SYNE4Q8N205 404 aa13.85□□□□□ -0.19
COMMD4-209ENST00000564068 HOMER3Q9NSC5 361 aa13.85□□□□□ -0.19
COMMD4-209ENST00000564068 EIF3HO15372 352 aaKnown RBP eCLIP13.85□□□□□ -0.19
COMMD4-209ENST00000564068 APBA3O96018 575 aa13.85□□□□□ -0.19
COMMD4-209ENST00000564068 PDE6BP35913 854 aa13.85□□□□□ -0.19
COMMD4-209ENST00000564068 PACS2Q86VP3 889 aa13.85□□□□□ -0.19
COMMD4-209ENST00000564068 FAM133AQ8N9E0 248 aa13.85□□□□□ -0.19
COMMD4-209ENST00000564068 RDH13Q8NBN7 331 aa13.85□□□□□ -0.19
COMMD4-209ENST00000564068 KLHL29Q96CT2 875 aa13.85□□□□□ -0.19
COMMD4-209ENST00000564068 VIPAS39Q9H9C1 493 aa13.85□□□□□ -0.19
COMMD4-209ENST00000564068 AGPAT5Q9NUQ2 364 aa13.85□□□□□ -0.19
COMMD4-209ENST00000564068 PACSIN2Q9UNF0 486 aaPredicted RBP13.85□□□□□ -0.19
COMMD4-209ENST00000564068 HMGB1P1B2RPK0 211 aaPredicted RBP13.84□□□□□ -0.19
COMMD4-209ENST00000564068 NBPF5PQ86XG9 351 aaPredicted RBP13.84□□□□□ -0.19
COMMD4-209ENST00000564068 SYCE1Q8N0S2 351 aa13.84□□□□□ -0.19
COMMD4-209ENST00000564068 KAZALD1Q96I82 304 aa13.84□□□□□ -0.19
COMMD4-209ENST00000564068 THAP9Q9H5L6 903 aa13.84□□□□□ -0.19
COMMD4-209ENST00000564068 HOMER2Q9NSB8 354 aa13.84□□□□□ -0.19
COMMD4-209ENST00000564068 KLC4Q9NSK0 619 aa13.84□□□□□ -0.19
COMMD4-209ENST00000564068 MROH5Q6ZUA9 1318 aa13.84□□□□□ -0.19
COMMD4-209ENST00000564068 PP2D1A8MPX8 630 aa13.84□□□□□ -0.19
COMMD4-209ENST00000564068 LDHBP07195 334 aaKnown RBP13.84□□□□□ -0.19
COMMD4-209ENST00000564068 GBP1P32455 592 aa13.84□□□□□ -0.19
COMMD4-209ENST00000564068 MAN2A1Q16706 1144 aa13.84□□□□□ -0.19
COMMD4-209ENST00000564068 CCDC38Q502W7 563 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms