RNA–Protein interactions for RNA: ENST00000563995.1

SLX1A-204, Transcript of SLX1 homolog A, structure-specific endonuclease subunit, humanhuman

TSL 3

Gene SLX1A, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX1A-204ENST00000563995 SENP6Q9GZR1 1112 aaPredicted RBP22.61■■□□□ 1.21
SLX1A-204ENST00000563995 VAT1LQ9HCJ6 419 aa22.61■■□□□ 1.21
SLX1A-204ENST00000563995 RBM28Q9NW13 759 aaKnown RBP22.61■■□□□ 1.21
SLX1A-204ENST00000563995 PNMA2Q9UL42 364 aa22.61■■□□□ 1.21
SLX1A-204ENST00000563995 NAP1L2Q9ULW6 460 aaPredicted RBP22.61■■□□□ 1.21
SLX1A-204ENST00000563995 NID2Q14112 1375 aa22.61■■□□□ 1.21
SLX1A-204ENST00000563995 DNM1LO00429 736 aa22.6■■□□□ 1.21
SLX1A-204ENST00000563995 STRNO43815 780 aa22.6■■□□□ 1.21
SLX1A-204ENST00000563995 PLEKHA8P1O95397 391 aa22.6■■□□□ 1.21
SLX1A-204ENST00000563995 CYBAP13498 195 aa22.6■■□□□ 1.21
SLX1A-204ENST00000563995 SMARCA1P28370 1054 aa22.6■■□□□ 1.21
SLX1A-204ENST00000563995 CYP2C19P33261 490 aa22.6■■□□□ 1.21
SLX1A-204ENST00000563995 METAP2P50579 478 aaKnown RBP eCLIP22.6■■□□□ 1.21
SLX1A-204ENST00000563995 RTN1Q16799 776 aa22.6■■□□□ 1.21
SLX1A-204ENST00000563995 QRICH1Q2TAL8 776 aa22.6■■□□□ 1.21
SLX1A-204ENST00000563995 TMTC3Q6ZXV5 915 aa22.6■■□□□ 1.21
SLX1A-204ENST00000563995 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.6■■□□□ 1.21
SLX1A-204ENST00000563995 ABRAQ8N0Z2 381 aa22.6■■□□□ 1.21
SLX1A-204ENST00000563995 FAM122AQ96E09 287 aa22.6■■□□□ 1.21
SLX1A-204ENST00000563995 KIF2CQ99661 725 aa22.6■■□□□ 1.21
SLX1A-204ENST00000563995 SPZ1Q9BXG8 430 aa22.6■■□□□ 1.21
SLX1A-204ENST00000563995 FBXO40Q9UH90 709 aa22.6■■□□□ 1.21
SLX1A-204ENST00000563995 ALAS1P13196 640 aa22.59■■□□□ 1.21
SLX1A-204ENST00000563995 SRBD1Q8N5C6 995 aaKnown RBP22.59■■□□□ 1.21
SLX1A-204ENST00000563995 HOMER2Q9NSB8 354 aa22.59■■□□□ 1.21
SLX1A-204ENST00000563995 RNF146Q9NTX7 359 aa22.59■■□□□ 1.21
SLX1A-204ENST00000563995 ZBTB5O15062 677 aa22.58■■□□□ 1.21
SLX1A-204ENST00000563995 FCER1AP12319 257 aa22.58■■□□□ 1.21
SLX1A-204ENST00000563995 TAL1P17542 331 aaPredicted RBP22.58■■□□□ 1.21
SLX1A-204ENST00000563995 CNGA1P29973 690 aa22.58■■□□□ 1.21
SLX1A-204ENST00000563995 NEK4P51957 841 aa22.58■■□□□ 1.21
SLX1A-204ENST00000563995 PPP2R5BQ15173 497 aa22.58■■□□□ 1.21
SLX1A-204ENST00000563995 TBC1D32Q96NH3 1257 aa22.58■■□□□ 1.21
SLX1A-204ENST00000563995 TRERF1Q96PN7 1200 aa22.58■■□□□ 1.21
SLX1A-204ENST00000563995 MMP19Q99542 508 aa22.58■■□□□ 1.21
SLX1A-204ENST00000563995 ACAD9Q9H845 621 aa22.58■■□□□ 1.21
SLX1A-204ENST00000563995 FAM217BQ9NTX9 383 aaPredicted RBP22.58■■□□□ 1.21
SLX1A-204ENST00000563995 TTC28Q96AY4 2481 aa22.58■■□□□ 1.21
SLX1A-204ENST00000563995 LAMA2P24043 3122 aaKnown RBP22.57■■□□□ 1.2
SLX1A-204ENST00000563995 TNFRSF10AO00220 468 aa22.57■■□□□ 1.2
SLX1A-204ENST00000563995 ADORA2AP29274 412 aa22.57■■□□□ 1.2
SLX1A-204ENST00000563995 PDIA3P30101 505 aaKnown RBP22.57■■□□□ 1.2
SLX1A-204ENST00000563995 CDC27P30260 824 aa22.57■■□□□ 1.2
SLX1A-204ENST00000563995 ATN1P54259 1190 aaPredicted RBP22.57■■□□□ 1.2
SLX1A-204ENST00000563995 ANKRD1Q15327 319 aa22.57■■□□□ 1.2
SLX1A-204ENST00000563995 OLFML2BQ68BL8 750 aa22.57■■□□□ 1.2
SLX1A-204ENST00000563995 HOMER1Q86YM7 354 aa22.57■■□□□ 1.2
SLX1A-204ENST00000563995 CMTR1Q8N1G2 835 aaKnown RBP22.57■■□□□ 1.2
SLX1A-204ENST00000563995 ZNF274Q96GC6 653 aaPredicted RBP22.57■■□□□ 1.2
SLX1A-204ENST00000563995 PIGSQ96S52 555 aa22.57■■□□□ 1.2
SLX1A-204ENST00000563995 CCDC196A0A1B0GTZ2 297 aa22.56■■□□□ 1.2
SLX1A-204ENST00000563995 AK2P54819 239 aa22.56■■□□□ 1.2
SLX1A-204ENST00000563995 RTP1P59025 263 aa22.56■■□□□ 1.2
SLX1A-204ENST00000563995 KCTD2Q14681 263 aa22.56■■□□□ 1.2
SLX1A-204ENST00000563995 USH1GQ495M9 461 aa22.56■■□□□ 1.2
SLX1A-204ENST00000563995 MUM1L1Q5H9M0 696 aa22.56■■□□□ 1.2
SLX1A-204ENST00000563995 FBXO11Q86XK2 927 aa22.56■■□□□ 1.2
SLX1A-204ENST00000563995 LARP6Q9BRS8 491 aaKnown RBP22.56■■□□□ 1.2
SLX1A-204ENST00000563995 PNMA6FA0A0J9YX94 578 aa22.55■■□□□ 1.2
SLX1A-204ENST00000563995 PPP1R11O60927 126 aaPredicted RBP22.55■■□□□ 1.2
SLX1A-204ENST00000563995 RRP36Q96EU6 259 aaKnown RBP22.55■■□□□ 1.2
SLX1A-204ENST00000563995 LBHD1Q9BQE6 289 aaPredicted RBP22.55■■□□□ 1.2
SLX1A-204ENST00000563995 AMNQ9BXJ7 453 aa22.55■■□□□ 1.2
SLX1A-204ENST00000563995 ABCB11O95342 1321 aa22.55■■□□□ 1.2
SLX1A-204ENST00000563995 CNTNAP5Q8WYK1 1306 aa22.55■■□□□ 1.2
SLX1A-204ENST00000563995 EYSQ5T1H1 3165 aa22.54■■□□□ 1.2
SLX1A-204ENST00000563995 ADD1P35611 737 aaKnown RBP22.54■■□□□ 1.2
SLX1A-204ENST00000563995 FUT2Q10981 343 aa22.54■■□□□ 1.2
SLX1A-204ENST00000563995 GJC2Q5T442 439 aaPredicted RBP22.54■■□□□ 1.2
SLX1A-204ENST00000563995 DPP9Q86TI2 863 aa22.54■■□□□ 1.2
SLX1A-204ENST00000563995 ANKRD35Q8N283 1001 aa22.54■■□□□ 1.2
SLX1A-204ENST00000563995 CCDC82Q8N4S0 544 aa22.54■■□□□ 1.2
SLX1A-204ENST00000563995 PIBF1Q8WXW3 757 aa22.54■■□□□ 1.2
SLX1A-204ENST00000563995 TPCN1Q9ULQ1 816 aa22.54■■□□□ 1.2
SLX1A-204ENST00000563995 COBLO75128 1261 aa22.53■■□□□ 1.2
SLX1A-204ENST00000563995 CCT2P78371 535 aaKnown RBP22.53■■□□□ 1.2
SLX1A-204ENST00000563995 RABEP1Q15276 862 aa22.53■■□□□ 1.2
SLX1A-204ENST00000563995 CLEC4DQ8WXI8 215 aa22.53■■□□□ 1.2
SLX1A-204ENST00000563995 A1CFQ9NQ94 594 aaKnown RBP22.53■■□□□ 1.2
SLX1A-204ENST00000563995 SLC5A4Q9NY91 659 aa22.53■■□□□ 1.2
SLX1A-204ENST00000563995 SEC63Q9UGP8 760 aaKnown RBP22.53■■□□□ 1.2
SLX1A-204ENST00000563995 MYH6P13533 1939 aa22.53■■□□□ 1.2
SLX1A-204ENST00000563995 NFIBO00712 420 aa22.52■■□□□ 1.2
SLX1A-204ENST00000563995 PGK2P07205 417 aa22.52■■□□□ 1.2
SLX1A-204ENST00000563995 TRAF1Q13077 416 aa22.52■■□□□ 1.2
SLX1A-204ENST00000563995 SNX17Q15036 470 aa22.52■■□□□ 1.2
SLX1A-204ENST00000563995 SLC39A5Q6ZMH5 540 aa22.52■■□□□ 1.2
SLX1A-204ENST00000563995 DDX11Q96FC9 970 aa22.52■■□□□ 1.2
SLX1A-204ENST00000563995 NCOA5Q9HCD5 579 aaKnown RBP22.52■■□□□ 1.2
SLX1A-204ENST00000563995 MRPL11Q9Y3B7 192 aaKnown RBP22.52■■□□□ 1.2
SLX1A-204ENST00000563995 BAZ2BQ9UIF8 2168 aaKnown RBP22.52■■□□□ 1.2
SLX1A-204ENST00000563995 DNAJC25-GNG10A0A024R161 153 aa22.51■■□□□ 1.19
SLX1A-204ENST00000563995 SEPT4O43236 478 aa22.51■■□□□ 1.19
SLX1A-204ENST00000563995 STK3Q13188 491 aa22.51■■□□□ 1.19
SLX1A-204ENST00000563995 ZNF792Q3KQV3 632 aa22.51■■□□□ 1.19
SLX1A-204ENST00000563995 ARRDC4Q8NCT1 418 aa22.51■■□□□ 1.19
SLX1A-204ENST00000563995 MYLIPQ8WY64 445 aa22.51■■□□□ 1.19
SLX1A-204ENST00000563995 SEMA6BQ9H3T3 888 aa22.51■■□□□ 1.19
SLX1A-204ENST00000563995 PRKAG2Q9UGJ0 569 aa22.51■■□□□ 1.19
SLX1A-204ENST00000563995 ATP11BQ9Y2G3 1177 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms