RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 ZBTB40Q9NUA8 1239 aa19.01■□□□□ 0.63
RNF40-205ENST00000563909 ZDBF2Q9HCK1 2354 aa19■□□□□ 0.63
RNF40-205ENST00000563909 PTPN5P54829 565 aa19■□□□□ 0.63
RNF40-205ENST00000563909 DEFB103AP81534 67 aa19■□□□□ 0.63
RNF40-205ENST00000563909 BFSP2Q13515 415 aa19■□□□□ 0.63
RNF40-205ENST00000563909 NBPF20Q3BBV1 942 aa19■□□□□ 0.63
RNF40-205ENST00000563909 KIAA1211Q6ZU35 1233 aa19■□□□□ 0.63
RNF40-205ENST00000563909 UPF3BQ9BZI7 483 aaKnown RBP19■□□□□ 0.63
RNF40-205ENST00000563909 A1CFQ9NQ94 594 aaKnown RBP19■□□□□ 0.63
RNF40-205ENST00000563909 GPHNQ9NQX3 736 aaPredicted RBP19■□□□□ 0.63
RNF40-205ENST00000563909 PRKAG3Q9UGI9 489 aa19■□□□□ 0.63
RNF40-205ENST00000563909 FAM50BQ9Y247 325 aa19■□□□□ 0.63
RNF40-205ENST00000563909 SPTBN4Q9H254 2564 aa18.99■□□□□ 0.63
RNF40-205ENST00000563909 LINC01553A4QN01 128 aa18.99■□□□□ 0.63
RNF40-205ENST00000563909 C19orf67A6NJJ6 358 aa18.99■□□□□ 0.63
RNF40-205ENST00000563909 EP400NLQ6ZTU2 488 aa18.99■□□□□ 0.63
RNF40-205ENST00000563909 CRBNQ96SW2 442 aa18.99■□□□□ 0.63
RNF40-205ENST00000563909 MTG1Q9BT17 334 aaPredicted RBP18.99■□□□□ 0.63
RNF40-205ENST00000563909 FEM1BQ9UK73 627 aa18.99■□□□□ 0.63
RNF40-205ENST00000563909 MBD4O95243 580 aa18.98■□□□□ 0.63
RNF40-205ENST00000563909 GJB5O95377 273 aa18.98■□□□□ 0.63
RNF40-205ENST00000563909 IRS1P35568 1242 aa18.98■□□□□ 0.63
RNF40-205ENST00000563909 DUSP28Q4G0W2 176 aa18.98■□□□□ 0.63
RNF40-205ENST00000563909 IER5LQ5T953 404 aa18.98■□□□□ 0.63
RNF40-205ENST00000563909 AACSQ86V21 672 aa18.98■□□□□ 0.63
RNF40-205ENST00000563909 ADHFE1Q8IWW8 467 aa18.98■□□□□ 0.63
RNF40-205ENST00000563909 RNF146Q9NTX7 359 aa18.98■□□□□ 0.63
RNF40-205ENST00000563909 NYAP2Q9P242 653 aa18.98■□□□□ 0.63
RNF40-205ENST00000563909 NOD1Q9Y239 953 aa18.98■□□□□ 0.63
RNF40-205ENST00000563909 TET1Q8NFU7 2136 aa18.98■□□□□ 0.63
RNF40-205ENST00000563909 PTPRSQ13332 1948 aa18.98■□□□□ 0.63
RNF40-205ENST00000563909 GOLIM4O00461 696 aa18.97■□□□□ 0.63
RNF40-205ENST00000563909 CPT1AP50416 773 aa18.97■□□□□ 0.63
RNF40-205ENST00000563909 SLFNL1Q499Z3 407 aa18.97■□□□□ 0.63
RNF40-205ENST00000563909 FBXO22Q8NEZ5 403 aa18.97■□□□□ 0.63
RNF40-205ENST00000563909 DDRGK1Q96HY6 314 aa18.97■□□□□ 0.63
RNF40-205ENST00000563909 VTA1Q9NP79 307 aa18.97■□□□□ 0.63
RNF40-205ENST00000563909 CLIP2Q9UDT6 1046 aa18.97■□□□□ 0.63
RNF40-205ENST00000563909 BAZ2AQ9UIF9 1905 aaKnown RBP18.97■□□□□ 0.63
RNF40-205ENST00000563909 GFRA3O60609 400 aa18.96■□□□□ 0.63
RNF40-205ENST00000563909 AAMPQ13685 434 aa18.96■□□□□ 0.63
RNF40-205ENST00000563909 LRRFIP1Q32MZ4 808 aaKnown RBP18.96■□□□□ 0.63
RNF40-205ENST00000563909 FAM117BQ6P1L5 589 aa18.96■□□□□ 0.63
RNF40-205ENST00000563909 NFRKBQ6P4R8 1299 aa18.96■□□□□ 0.63
RNF40-205ENST00000563909 RPAP2Q8IXW5 612 aaPredicted RBP18.96■□□□□ 0.63
RNF40-205ENST00000563909 MRPL38Q96DV4 380 aaKnown RBP18.96■□□□□ 0.63
RNF40-205ENST00000563909 C17orf80Q9BSJ5 609 aa18.96■□□□□ 0.63
RNF40-205ENST00000563909 WDR11Q9BZH6 1224 aa18.96■□□□□ 0.63
RNF40-205ENST00000563909 CTNNA3Q9UI47 895 aa18.96■□□□□ 0.63
RNF40-205ENST00000563909 MUTYHQ9UIF7 546 aa18.96■□□□□ 0.63
RNF40-205ENST00000563909 TANC1Q9C0D5 1861 aa18.95■□□□□ 0.62
RNF40-205ENST00000563909 PTPROQ16827 1216 aa18.95■□□□□ 0.62
RNF40-205ENST00000563909 CTR9Q6PD62 1173 aa18.95■□□□□ 0.62
RNF40-205ENST00000563909 TRERF1Q96PN7 1200 aa18.95■□□□□ 0.62
RNF40-205ENST00000563909 DNAJC2Q99543 621 aaKnown RBP18.95■□□□□ 0.62
RNF40-205ENST00000563909 CHMP4BP1P59074 171 aa18.94■□□□□ 0.62
RNF40-205ENST00000563909 PTPN11Q06124 597 aaPredicted RBP18.94■□□□□ 0.62
RNF40-205ENST00000563909 GPNMBQ14956 572 aa18.94■□□□□ 0.62
RNF40-205ENST00000563909 HERC4Q5GLZ8 1057 aaPredicted RBP18.94■□□□□ 0.62
RNF40-205ENST00000563909 CEP85Q6P2H3 762 aa18.94■□□□□ 0.62
RNF40-205ENST00000563909 ERC1Q8IUD2 1116 aa18.94■□□□□ 0.62
RNF40-205ENST00000563909 STK11IPQ8N1F8 1099 aa18.94■□□□□ 0.62
RNF40-205ENST00000563909 BANK1Q8NDB2 785 aa18.94■□□□□ 0.62
RNF40-205ENST00000563909 OR6J1Q8NGC5 347 aa18.94■□□□□ 0.62
RNF40-205ENST00000563909 PABPC5Q96DU9 382 aaKnown RBP18.94■□□□□ 0.62
RNF40-205ENST00000563909 PURBQ96QR8 312 aaKnown RBP18.94■□□□□ 0.62
RNF40-205ENST00000563909 FDX1P10109 184 aa18.93■□□□□ 0.62
RNF40-205ENST00000563909 ALAS1P13196 640 aa18.93■□□□□ 0.62
RNF40-205ENST00000563909 RASA1P20936 1047 aa18.93■□□□□ 0.62
RNF40-205ENST00000563909 TCF15Q12870 199 aa18.93■□□□□ 0.62
RNF40-205ENST00000563909 PTGISQ16647 500 aa18.93■□□□□ 0.62
RNF40-205ENST00000563909 BRDTQ58F21 947 aaPredicted RBP18.93■□□□□ 0.62
RNF40-205ENST00000563909 CNKSR3Q6P9H4 555 aa18.93■□□□□ 0.62
RNF40-205ENST00000563909 CCDC155Q8N6L0 562 aa18.93■□□□□ 0.62
RNF40-205ENST00000563909 AFAP1L1Q8TED9 768 aa18.93■□□□□ 0.62
RNF40-205ENST00000563909 PRRX2Q99811 253 aa18.93■□□□□ 0.62
RNF40-205ENST00000563909 MKNK2Q9HBH9 465 aa18.93■□□□□ 0.62
RNF40-205ENST00000563909 ISY1Q9ULR0 285 aaKnown RBP18.93■□□□□ 0.62
RNF40-205ENST00000563909 EXOC6BQ9Y2D4 811 aa18.93■□□□□ 0.62
RNF40-205ENST00000563909 SLC4A4Q9Y6R1 1079 aa18.93■□□□□ 0.62
RNF40-205ENST00000563909 ABHD14A-ACY1A0A1B0GW23 586 aa18.92■□□□□ 0.62
RNF40-205ENST00000563909 SELPP16109 830 aa18.92■□□□□ 0.62
RNF40-205ENST00000563909 TCTN1Q2MV58 587 aa18.92■□□□□ 0.62
RNF40-205ENST00000563909 TKFCQ3LXA3 575 aa18.92■□□□□ 0.62
RNF40-205ENST00000563909 TIGD5Q53EQ6 642 aa18.92■□□□□ 0.62
RNF40-205ENST00000563909 TCEAL5Q5H9L2 206 aa18.92■□□□□ 0.62
RNF40-205ENST00000563909 EDAQ92838 391 aa18.92■□□□□ 0.62
RNF40-205ENST00000563909 PBXIP1Q96AQ6 731 aa18.92■□□□□ 0.62
RNF40-205ENST00000563909 CYP39A1Q9NYL5 469 aa18.92■□□□□ 0.62
RNF40-205ENST00000563909 SIP14410 1827 aa18.92■□□□□ 0.62
RNF40-205ENST00000563909 TMEM232C9JQI7 657 aa18.91■□□□□ 0.62
RNF40-205ENST00000563909 KPNA6O60684 536 aa18.91■□□□□ 0.62
RNF40-205ENST00000563909 HMMRO75330 724 aa18.91■□□□□ 0.62
RNF40-205ENST00000563909 BMP3P12645 472 aa18.91■□□□□ 0.62
RNF40-205ENST00000563909 ADD2P35612 726 aa18.91■□□□□ 0.62
RNF40-205ENST00000563909 LRRC8DQ7L1W4 858 aa18.91■□□□□ 0.62
RNF40-205ENST00000563909 BMP8AQ7Z5Y6 402 aa18.91■□□□□ 0.62
RNF40-205ENST00000563909 RNF135Q8IUD6 432 aa18.91■□□□□ 0.62
RNF40-205ENST00000563909 CAGE1Q8TC20 777 aa18.91■□□□□ 0.62
RNF40-205ENST00000563909 MORC4Q8TE76 937 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms