RNA–Protein interactions for RNA: ENST00000563829.5

SCAMP2-204, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 3,162 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-204ENST00000563829 GPR108Q9NPR9 543 aa13.66□□□□□ -0.22
SCAMP2-204ENST00000563829 CNOT8Q9UFF9 292 aaKnown RBP13.66□□□□□ -0.22
SCAMP2-204ENST00000563829 SLC12A6Q9UHW9 1150 aa13.66□□□□□ -0.22
SCAMP2-204ENST00000563829 NOVA2Q9UNW9 492 aaKnown RBP13.66□□□□□ -0.22
SCAMP2-204ENST00000563829 PDS5AQ29RF7 1337 aaKnown RBP13.66□□□□□ -0.22
SCAMP2-204ENST00000563829 MPHOSPH10O00566 681 aaKnown RBP13.66□□□□□ -0.22
SCAMP2-204ENST00000563829 IDH1O75874 414 aaKnown RBP13.66□□□□□ -0.22
SCAMP2-204ENST00000563829 PROCA1Q8NCQ7 364 aaPredicted RBP13.66□□□□□ -0.22
SCAMP2-204ENST00000563829 CCDC47Q96A33 483 aaKnown RBP13.66□□□□□ -0.22
SCAMP2-204ENST00000563829 PXDNQ92626 1479 aa13.66□□□□□ -0.22
SCAMP2-204ENST00000563829 PIK3C2AO00443 1686 aa13.65□□□□□ -0.22
SCAMP2-204ENST00000563829 DCDC2CA8MYV0 355 aa13.65□□□□□ -0.22
SCAMP2-204ENST00000563829 DIAPH2O60879 1101 aa13.65□□□□□ -0.22
SCAMP2-204ENST00000563829 DNAJC8O75937 253 aaPredicted RBP13.65□□□□□ -0.22
SCAMP2-204ENST00000563829 KIF11P52732 1056 aa13.65□□□□□ -0.22
SCAMP2-204ENST00000563829 PTGDRQ13258 359 aa13.65□□□□□ -0.22
SCAMP2-204ENST00000563829 RBBP5Q15291 538 aaKnown RBP13.65□□□□□ -0.22
SCAMP2-204ENST00000563829 LACTB2Q53H82 288 aaPredicted RBP13.65□□□□□ -0.22
SCAMP2-204ENST00000563829 CRACR2BQ8N4Y2 399 aaPredicted RBP13.65□□□□□ -0.22
SCAMP2-204ENST00000563829 EBF2Q9HAK2 575 aa13.65□□□□□ -0.22
SCAMP2-204ENST00000563829 GTPBP6O43824 516 aaPredicted RBP13.65□□□□□ -0.22
SCAMP2-204ENST00000563829 SRGNP10124 158 aa13.65□□□□□ -0.22
SCAMP2-204ENST00000563829 HSD17B3P37058 310 aa13.65□□□□□ -0.22
SCAMP2-204ENST00000563829 CHADLQ6NUI6 762 aa13.65□□□□□ -0.22
SCAMP2-204ENST00000563829 FERMT2Q96AC1 680 aa13.65□□□□□ -0.22
SCAMP2-204ENST00000563829 TTYH3Q9C0H2 523 aa13.65□□□□□ -0.22
SCAMP2-204ENST00000563829 TOPAZ1Q8N9V7 1692 aa13.65□□□□□ -0.22
SCAMP2-204ENST00000563829 ECM29Q5VYK3 1845 aa13.65□□□□□ -0.22
SCAMP2-204ENST00000563829 TRIM37O94972 964 aa13.65□□□□□ -0.23
SCAMP2-204ENST00000563829 EEF1GP26641 437 aaKnown RBP13.65□□□□□ -0.23
SCAMP2-204ENST00000563829 EIF4A3P38919 411 aaKnown RBP13.65□□□□□ -0.23
SCAMP2-204ENST00000563829 RASSF7Q02833 373 aa13.65□□□□□ -0.23
SCAMP2-204ENST00000563829 AMOTQ4VCS5 1084 aa13.65□□□□□ -0.23
SCAMP2-204ENST00000563829 FAM133BQ5BKY9 247 aaKnown RBP13.65□□□□□ -0.23
SCAMP2-204ENST00000563829 PLPPR3Q6T4P5 718 aa13.65□□□□□ -0.23
SCAMP2-204ENST00000563829 MREGQ8N565 214 aa13.65□□□□□ -0.23
SCAMP2-204ENST00000563829 MDM1Q8TC05 714 aa13.65□□□□□ -0.23
SCAMP2-204ENST00000563829 WHAMMQ8TF30 809 aa13.65□□□□□ -0.23
SCAMP2-204ENST00000563829 UBLCP1Q8WVY7 318 aaPredicted RBP13.65□□□□□ -0.23
SCAMP2-204ENST00000563829 FAM167BQ9BTA0 163 aa13.65□□□□□ -0.23
SCAMP2-204ENST00000563829 IRAK4Q9NWZ3 460 aa13.65□□□□□ -0.23
SCAMP2-204ENST00000563829 ARHGAP20Q9P2F6 1191 aa13.65□□□□□ -0.23
SCAMP2-204ENST00000563829 SRRM3A6NNA2 597 aaPredicted RBP13.64□□□□□ -0.23
SCAMP2-204ENST00000563829 PPIP5K2O43314 1243 aa13.64□□□□□ -0.23
SCAMP2-204ENST00000563829 SNUPNO95149 360 aaKnown RBP13.64□□□□□ -0.23
SCAMP2-204ENST00000563829 KIF4AO95239 1232 aa13.64□□□□□ -0.23
SCAMP2-204ENST00000563829 MYBL1P10243 752 aa13.64□□□□□ -0.23
SCAMP2-204ENST00000563829 MAGEA1P43355 309 aa13.64□□□□□ -0.23
SCAMP2-204ENST00000563829 MTIF2P46199 727 aaKnown RBP13.64□□□□□ -0.23
SCAMP2-204ENST00000563829 CASP7P55210 303 aa13.64□□□□□ -0.23
SCAMP2-204ENST00000563829 RWDD2BP57060 319 aa13.64□□□□□ -0.23
SCAMP2-204ENST00000563829 PPP2R2AP63151 447 aa13.64□□□□□ -0.23
SCAMP2-204ENST00000563829 ICA1Q05084 483 aa13.64□□□□□ -0.23
SCAMP2-204ENST00000563829 MIS18BP1Q6P0N0 1132 aa13.64□□□□□ -0.23
SCAMP2-204ENST00000563829 TMC4Q7Z404 712 aa13.64□□□□□ -0.23
SCAMP2-204ENST00000563829 CSGALNACT2Q8N6G5 542 aa13.64□□□□□ -0.23
SCAMP2-204ENST00000563829 AGAP11Q8TF27 550 aa13.64□□□□□ -0.23
SCAMP2-204ENST00000563829 ZNF570Q96NI8 536 aa13.64□□□□□ -0.23
SCAMP2-204ENST00000563829 FAM207AQ9NSI2 230 aaPredicted RBP13.64□□□□□ -0.23
SCAMP2-204ENST00000563829 PANK4Q9NVE7 773 aa13.64□□□□□ -0.23
SCAMP2-204ENST00000563829 RMND1Q9NWS8 449 aa13.64□□□□□ -0.23
SCAMP2-204ENST00000563829 PACSIN2Q9UNF0 486 aaPredicted RBP13.64□□□□□ -0.23
SCAMP2-204ENST00000563829 FTCDO95954 541 aa13.64□□□□□ -0.23
SCAMP2-204ENST00000563829 MAGOHP61326 146 aaKnown RBP13.64□□□□□ -0.23
SCAMP2-204ENST00000563829 TCIRG1Q13488 830 aa13.64□□□□□ -0.23
SCAMP2-204ENST00000563829 PDXDC2PQ6P474 469 aa13.64□□□□□ -0.23
SCAMP2-204ENST00000563829 DDX42Q86XP3 938 aaKnown RBP eCLIP13.64□□□□□ -0.23
SCAMP2-204ENST00000563829 MAGOHBQ96A72 148 aaKnown RBP13.64□□□□□ -0.23
SCAMP2-204ENST00000563829 MTMR8Q96EF0 704 aa13.64□□□□□ -0.23
SCAMP2-204ENST00000563829 ZNF496Q96IT1 587 aaPredicted RBP13.64□□□□□ -0.23
SCAMP2-204ENST00000563829 KDM4CQ9H3R0 1056 aa13.64□□□□□ -0.23
SCAMP2-204ENST00000563829 TAF1DQ9H5J8 278 aaPredicted RBP13.64□□□□□ -0.23
SCAMP2-204ENST00000563829 RAD51CO43502 376 aa13.63□□□□□ -0.23
SCAMP2-204ENST00000563829 LIFRP42702 1097 aa13.63□□□□□ -0.23
SCAMP2-204ENST00000563829 ZNF844Q08AG5 666 aa13.63□□□□□ -0.23
SCAMP2-204ENST00000563829 ADSSL1Q8N142 457 aa13.63□□□□□ -0.23
SCAMP2-204ENST00000563829 PLIN2Q99541 437 aa13.63□□□□□ -0.23
SCAMP2-204ENST00000563829 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.63□□□□□ -0.23
SCAMP2-204ENST00000563829 ANKRD33BA6NCL7 494 aa13.63□□□□□ -0.23
SCAMP2-204ENST00000563829 CCT8L1PA6NM43 557 aa13.63□□□□□ -0.23
SCAMP2-204ENST00000563829 NKRFO15226 690 aaKnown RBP eCLIP13.63□□□□□ -0.23
SCAMP2-204ENST00000563829 KLHDC7AQ5VTJ3 777 aa13.63□□□□□ -0.23
SCAMP2-204ENST00000563829 C3orf20Q8ND61 904 aa13.63□□□□□ -0.23
SCAMP2-204ENST00000563829 NOC4LQ9BVI4 516 aaKnown RBP13.63□□□□□ -0.23
SCAMP2-204ENST00000563829 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.63□□□□□ -0.23
SCAMP2-204ENST00000563829 SMNDC1O75940 238 aaKnown RBP eCLIP13.63□□□□□ -0.23
SCAMP2-204ENST00000563829 KRT2P35908 639 aa13.63□□□□□ -0.23
SCAMP2-204ENST00000563829 SSR1P43307 286 aaKnown RBP13.63□□□□□ -0.23
SCAMP2-204ENST00000563829 ARMC3Q5W041 872 aa13.63□□□□□ -0.23
SCAMP2-204ENST00000563829 CCDC197Q8NCU1 140 aa13.63□□□□□ -0.23
SCAMP2-204ENST00000563829 ZNF526Q8TF50 670 aaPredicted RBP13.63□□□□□ -0.23
SCAMP2-204ENST00000563829 SHISA4Q96DD7 197 aa13.63□□□□□ -0.23
SCAMP2-204ENST00000563829 PLCB1Q9NQ66 1216 aa13.63□□□□□ -0.23
SCAMP2-204ENST00000563829 NOP53Q9NZM5 478 aaKnown RBP13.63□□□□□ -0.23
SCAMP2-204ENST00000563829 CAND2O75155 1236 aa13.62□□□□□ -0.23
SCAMP2-204ENST00000563829 MCM7P33993 719 aa13.62□□□□□ -0.23
SCAMP2-204ENST00000563829 HSPA9P38646 679 aaKnown RBP13.62□□□□□ -0.23
SCAMP2-204ENST00000563829 GFPT1Q06210 699 aaPredicted RBP13.62□□□□□ -0.23
SCAMP2-204ENST00000563829 WTAPQ15007 396 aa13.62□□□□□ -0.23
SCAMP2-204ENST00000563829 TTC38Q5R3I4 469 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms