RNA–Protein interactions for RNA: ENST00000563720.1

MAP1LC3B-204, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 3

Gene MAP1LC3B, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-204ENST00000563720 DDX49Q9Y6V7 483 aaKnown RBP20.39■□□□□ 0.85
MAP1LC3B-204ENST00000563720 MROH7Q68CQ1 1323 aa20.38■□□□□ 0.85
MAP1LC3B-204ENST00000563720 WDR19Q8NEZ3 1342 aa20.38■□□□□ 0.85
MAP1LC3B-204ENST00000563720 MYADML2A6NDP7 307 aa20.38■□□□□ 0.85
MAP1LC3B-204ENST00000563720 CYP21A2P08686 494 aa20.38■□□□□ 0.85
MAP1LC3B-204ENST00000563720 BAATQ14032 418 aaPredicted RBP20.38■□□□□ 0.85
MAP1LC3B-204ENST00000563720 CCSAPQ6IQ19 270 aaPredicted RBP20.38■□□□□ 0.85
MAP1LC3B-204ENST00000563720 MFSD5Q6N075 450 aa20.38■□□□□ 0.85
MAP1LC3B-204ENST00000563720 CYB5R4Q7L1T6 521 aa20.38■□□□□ 0.85
MAP1LC3B-204ENST00000563720 CLEC4DQ8WXI8 215 aa20.38■□□□□ 0.85
MAP1LC3B-204ENST00000563720 VTI1AQ96AJ9 217 aa20.38■□□□□ 0.85
MAP1LC3B-204ENST00000563720 GLT1D1Q96MS3 346 aa20.38■□□□□ 0.85
MAP1LC3B-204ENST00000563720 UBA5Q9GZZ9 404 aa20.38■□□□□ 0.85
MAP1LC3B-204ENST00000563720 PNMA2Q9UL42 364 aa20.38■□□□□ 0.85
MAP1LC3B-204ENST00000563720 CST5P28325 142 aaPredicted RBP20.37■□□□□ 0.85
MAP1LC3B-204ENST00000563720 IRX5P78411 483 aaPredicted RBP20.37■□□□□ 0.85
MAP1LC3B-204ENST00000563720 SEC23AQ15436 765 aa20.37■□□□□ 0.85
MAP1LC3B-204ENST00000563720 MORC4Q8TE76 937 aa20.37■□□□□ 0.85
MAP1LC3B-204ENST00000563720 ATXN2LQ8WWM7 1075 aaKnown RBP20.37■□□□□ 0.85
MAP1LC3B-204ENST00000563720 UBAC1Q9BSL1 405 aa20.37■□□□□ 0.85
MAP1LC3B-204ENST00000563720 PBX4Q9BYU1 374 aa20.37■□□□□ 0.85
MAP1LC3B-204ENST00000563720 UPF3AQ9H1J1 476 aaKnown RBP20.37■□□□□ 0.85
MAP1LC3B-204ENST00000563720 TBX21Q9UL17 535 aa20.37■□□□□ 0.85
MAP1LC3B-204ENST00000563720 U3KPZ7 1027 aaPredicted RBP20.37■□□□□ 0.85
MAP1LC3B-204ENST00000563720 BAZ2BQ9UIF8 2168 aaKnown RBP20.36■□□□□ 0.85
MAP1LC3B-204ENST00000563720 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.36■□□□□ 0.85
MAP1LC3B-204ENST00000563720 PBX2P40425 430 aa20.36■□□□□ 0.85
MAP1LC3B-204ENST00000563720 GJA9P57773 515 aa20.36■□□□□ 0.85
MAP1LC3B-204ENST00000563720 ASPRV1Q53RT3 343 aa20.36■□□□□ 0.85
MAP1LC3B-204ENST00000563720 TMEM240Q5SV17 173 aa20.36■□□□□ 0.85
MAP1LC3B-204ENST00000563720 PRDM12Q9H4Q4 367 aa20.36■□□□□ 0.85
MAP1LC3B-204ENST00000563720 THEGQ9P2T0 379 aa20.36■□□□□ 0.85
MAP1LC3B-204ENST00000563720 TAF6LQ9Y6J9 622 aa20.36■□□□□ 0.85
MAP1LC3B-204ENST00000563720 KIAA1217Q5T5P2 1943 aa20.35■□□□□ 0.85
MAP1LC3B-204ENST00000563720 TTC28Q96AY4 2481 aa20.35■□□□□ 0.85
MAP1LC3B-204ENST00000563720 ELP1O95163 1332 aa20.35■□□□□ 0.85
MAP1LC3B-204ENST00000563720 GRXCR1A8MXD5 290 aa20.35■□□□□ 0.85
MAP1LC3B-204ENST00000563720 CTAGE5O15320 804 aa20.35■□□□□ 0.85
MAP1LC3B-204ENST00000563720 C6orf222P0C671 652 aaPredicted RBP20.35■□□□□ 0.85
MAP1LC3B-204ENST00000563720 NKX3-2P78367 333 aa20.35■□□□□ 0.85
MAP1LC3B-204ENST00000563720 IFIT1BQ5T764 474 aaKnown RBP20.35■□□□□ 0.85
MAP1LC3B-204ENST00000563720 SLC30A10Q6XR72 485 aa20.35■□□□□ 0.85
MAP1LC3B-204ENST00000563720 TMEM199Q8N511 208 aa20.35■□□□□ 0.85
MAP1LC3B-204ENST00000563720 PCSK9Q8NBP7 692 aaKnown RBP20.35■□□□□ 0.85
MAP1LC3B-204ENST00000563720 SPC25Q9HBM1 224 aa20.35■□□□□ 0.85
MAP1LC3B-204ENST00000563720 PTPDC1A2A3K4 754 aa20.34■□□□□ 0.85
MAP1LC3B-204ENST00000563720 PARP1P09874 1014 aaKnown RBP20.34■□□□□ 0.85
MAP1LC3B-204ENST00000563720 CSF2RAP15509 400 aa20.34■□□□□ 0.85
MAP1LC3B-204ENST00000563720 ALDH5A1P51649 535 aaPredicted RBP20.34■□□□□ 0.85
MAP1LC3B-204ENST00000563720 TNFAIP2Q03169 654 aa20.34■□□□□ 0.85
MAP1LC3B-204ENST00000563720 TRDNQ13061 729 aa20.34■□□□□ 0.85
MAP1LC3B-204ENST00000563720 CDC37Q16543 378 aaPredicted RBP20.34■□□□□ 0.85
MAP1LC3B-204ENST00000563720 TAPT1Q6NXT6 567 aa20.34■□□□□ 0.85
MAP1LC3B-204ENST00000563720 RNF207Q6ZRF8 634 aa20.34■□□□□ 0.85
MAP1LC3B-204ENST00000563720 STOX1Q6ZVD7 989 aa20.34■□□□□ 0.85
MAP1LC3B-204ENST00000563720 C16orf59Q7L2K0 433 aa20.34■□□□□ 0.85
MAP1LC3B-204ENST00000563720 EEPD1Q7L9B9 569 aa20.34■□□□□ 0.85
MAP1LC3B-204ENST00000563720 FBXO16Q8IX29 292 aaPredicted RBP20.34■□□□□ 0.85
MAP1LC3B-204ENST00000563720 ADGRF4Q8IZF3 695 aa20.34■□□□□ 0.85
MAP1LC3B-204ENST00000563720 MAP4K1Q92918 833 aa20.34■□□□□ 0.85
MAP1LC3B-204ENST00000563720 ASB2Q96Q27 587 aa20.34■□□□□ 0.85
MAP1LC3B-204ENST00000563720 PPP1R12CQ9BZL4 782 aa20.34■□□□□ 0.85
MAP1LC3B-204ENST00000563720 PDGFCQ9NRA1 345 aa20.34■□□□□ 0.85
MAP1LC3B-204ENST00000563720 ADD3Q9UEY8 706 aaKnown RBP20.34■□□□□ 0.85
MAP1LC3B-204ENST00000563720 GNEQ9Y223 722 aaKnown RBP20.34■□□□□ 0.85
MAP1LC3B-204ENST00000563720 LOC102724159A0A0B4J2E5 919 aa20.33■□□□□ 0.85
MAP1LC3B-204ENST00000563720 E7EWF7 191 aa20.33■□□□□ 0.85
MAP1LC3B-204ENST00000563720 ASGR1P07306 291 aa20.33■□□□□ 0.85
MAP1LC3B-204ENST00000563720 ACRP10323 421 aa20.33■□□□□ 0.85
MAP1LC3B-204ENST00000563720 CALML3P27482 149 aa20.33■□□□□ 0.85
MAP1LC3B-204ENST00000563720 CDK7P50613 346 aa20.33■□□□□ 0.85
MAP1LC3B-204ENST00000563720 RPS6P62753 249 aaKnown RBP20.33■□□□□ 0.85
MAP1LC3B-204ENST00000563720 PWP2Q15269 919 aaKnown RBP20.33■□□□□ 0.85
MAP1LC3B-204ENST00000563720 USH1GQ495M9 461 aa20.33■□□□□ 0.85
MAP1LC3B-204ENST00000563720 PSRC1Q6PGN9 363 aaPredicted RBP20.33■□□□□ 0.85
MAP1LC3B-204ENST00000563720 ZNF365Q70YC5 407 aa20.33■□□□□ 0.85
MAP1LC3B-204ENST00000563720 SKAP1Q86WV1 359 aa20.33■□□□□ 0.85
MAP1LC3B-204ENST00000563720 VTA1Q9NP79 307 aa20.33■□□□□ 0.85
MAP1LC3B-204ENST00000563720 MSRAQ9UJ68 235 aa20.33■□□□□ 0.85
MAP1LC3B-204ENST00000563720 A0A0U1RQG5 324 aaPredicted RBP20.32■□□□□ 0.84
MAP1LC3B-204ENST00000563720 ARVCFO00192 962 aa20.32■□□□□ 0.84
MAP1LC3B-204ENST00000563720 TLR3O15455 904 aaKnown RBP20.32■□□□□ 0.84
MAP1LC3B-204ENST00000563720 SMPD1P17405 629 aa20.32■□□□□ 0.84
MAP1LC3B-204ENST00000563720 IGFBP4P22692 258 aa20.32■□□□□ 0.84
MAP1LC3B-204ENST00000563720 PTGS1P23219 599 aa20.32■□□□□ 0.84
MAP1LC3B-204ENST00000563720 CCDC85BQ15834 202 aaPredicted RBP20.32■□□□□ 0.84
MAP1LC3B-204ENST00000563720 GNASQ5JWF2 1037 aa20.32■□□□□ 0.84
MAP1LC3B-204ENST00000563720 RASIP1Q5U651 963 aa20.32■□□□□ 0.84
MAP1LC3B-204ENST00000563720 CENPQQ7L2Z9 268 aaPredicted RBP20.32■□□□□ 0.84
MAP1LC3B-204ENST00000563720 STAG2Q8N3U4 1231 aa20.32■□□□□ 0.84
MAP1LC3B-204ENST00000563720 IL27Q8NEV9 243 aa20.32■□□□□ 0.84
MAP1LC3B-204ENST00000563720 JMJD4Q9H9V9 463 aa20.32■□□□□ 0.84
MAP1LC3B-204ENST00000563720 MRPS5P82675 430 aaKnown RBP20.31■□□□□ 0.84
MAP1LC3B-204ENST00000563720 RAB30Q15771 203 aa20.31■□□□□ 0.84
MAP1LC3B-204ENST00000563720 QRICH1Q2TAL8 776 aa20.31■□□□□ 0.84
MAP1LC3B-204ENST00000563720 TMEM63BQ5T3F8 832 aa20.31■□□□□ 0.84
MAP1LC3B-204ENST00000563720 IQSEC1Q6DN90 963 aa20.31■□□□□ 0.84
MAP1LC3B-204ENST00000563720 NOL8Q76FK4 1167 aaKnown RBP20.31■□□□□ 0.84
MAP1LC3B-204ENST00000563720 TLK2Q86UE8 772 aa20.31■□□□□ 0.84
MAP1LC3B-204ENST00000563720 NCOA7Q8NI08 942 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms