RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 IFIT1BQ5T764 474 aaKnown RBP14.1□□□□□ -0.15
CCDC187-201ENST00000563590 NAA35Q5VZE5 725 aa14.1□□□□□ -0.15
CCDC187-201ENST00000563590 NLRP10Q86W26 655 aa14.1□□□□□ -0.15
CCDC187-201ENST00000563590 OR2W6PQ8NHA6 318 aa14.1□□□□□ -0.15
CCDC187-201ENST00000563590 ZNF473Q8WTR7 871 aaKnown RBP14.1□□□□□ -0.15
CCDC187-201ENST00000563590 ZKSCAN4Q969J2 545 aaPredicted RBP14.1□□□□□ -0.15
CCDC187-201ENST00000563590 CCT8L2Q96SF2 557 aa14.1□□□□□ -0.15
CCDC187-201ENST00000563590 STRBPQ96SI9 672 aaKnown RBP14.1□□□□□ -0.15
CCDC187-201ENST00000563590 KRT12Q99456 494 aa14.1□□□□□ -0.15
CCDC187-201ENST00000563590 LIMA1Q9UHB6 759 aaKnown RBP14.1□□□□□ -0.15
CCDC187-201ENST00000563590 MYH8P13535 1937 aa14.1□□□□□ -0.15
CCDC187-201ENST00000563590 NOC4LQ9BVI4 516 aaKnown RBP14.1□□□□□ -0.15
CCDC187-201ENST00000563590 TMCO5BA8MYB1 307 aa14.1□□□□□ -0.15
CCDC187-201ENST00000563590 USP17L12C9JPN9 530 aa14.1□□□□□ -0.15
CCDC187-201ENST00000563590 USP17L21D6R901 530 aa14.1□□□□□ -0.15
CCDC187-201ENST00000563590 EPHB4P54760 987 aa14.1□□□□□ -0.15
CCDC187-201ENST00000563590 HIBCHQ6NVY1 386 aaPredicted RBP14.1□□□□□ -0.15
CCDC187-201ENST00000563590 DZIP1Q86YF9 867 aaKnown RBP14.1□□□□□ -0.15
CCDC187-201ENST00000563590 CCDC13Q8IYE1 715 aa14.1□□□□□ -0.15
CCDC187-201ENST00000563590 SPATA4Q8NEY3 305 aa14.1□□□□□ -0.15
CCDC187-201ENST00000563590 RPGRIP1Q96KN7 1286 aa14.1□□□□□ -0.15
CCDC187-201ENST00000563590 SELENOSQ9BQE4 189 aa14.1□□□□□ -0.15
CCDC187-201ENST00000563590 MCM9Q9NXL9 1143 aa14.1□□□□□ -0.15
CCDC187-201ENST00000563590 ADAMTS7Q9UKP4 1686 aa14.09□□□□□ -0.15
CCDC187-201ENST00000563590 PSMD14O00487 310 aa14.09□□□□□ -0.15
CCDC187-201ENST00000563590 PSMA7O14818 248 aa14.09□□□□□ -0.15
CCDC187-201ENST00000563590 MAGEA1P43355 309 aa14.09□□□□□ -0.15
CCDC187-201ENST00000563590 HERVK_113P62684 666 aa14.09□□□□□ -0.15
CCDC187-201ENST00000563590 TRIM14Q14142 442 aa14.09□□□□□ -0.15
CCDC187-201ENST00000563590 CAVIN4Q5BKX8 364 aa14.09□□□□□ -0.15
CCDC187-201ENST00000563590 SUSD4Q5VX71 490 aa14.09□□□□□ -0.15
CCDC187-201ENST00000563590 ZBTB38Q8NAP3 1195 aaPredicted RBP14.09□□□□□ -0.15
CCDC187-201ENST00000563590 CCDC47Q96A33 483 aaKnown RBP14.09□□□□□ -0.15
CCDC187-201ENST00000563590 SHISA4Q96DD7 197 aa14.09□□□□□ -0.15
CCDC187-201ENST00000563590 SLC40A1Q9NP59 571 aa14.09□□□□□ -0.15
CCDC187-201ENST00000563590 KIF1AQ12756 1690 aa14.09□□□□□ -0.15
CCDC187-201ENST00000563590 DDX60Q8IY21 1712 aaKnown RBP14.09□□□□□ -0.15
CCDC187-201ENST00000563590 PDE8BO95263 885 aa14.09□□□□□ -0.15
CCDC187-201ENST00000563590 CPP00450 1065 aa14.09□□□□□ -0.15
CCDC187-201ENST00000563590 PLEKP08567 350 aaPredicted RBP14.09□□□□□ -0.15
CCDC187-201ENST00000563590 TMOD1P28289 359 aa14.09□□□□□ -0.15
CCDC187-201ENST00000563590 KRT2P35908 639 aa14.09□□□□□ -0.15
CCDC187-201ENST00000563590 CARSP49589 748 aaKnown RBP14.09□□□□□ -0.15
CCDC187-201ENST00000563590 RASSF7Q02833 373 aa14.09□□□□□ -0.15
CCDC187-201ENST00000563590 UBE3CQ15386 1083 aa14.09□□□□□ -0.15
CCDC187-201ENST00000563590 PTF1AQ7RTS3 328 aa14.09□□□□□ -0.15
CCDC187-201ENST00000563590 TMC4Q7Z404 712 aa14.09□□□□□ -0.15
CCDC187-201ENST00000563590 NLRP14Q86W24 1093 aa14.09□□□□□ -0.15
CCDC187-201ENST00000563590 IFT20Q8IY31 132 aa14.09□□□□□ -0.15
CCDC187-201ENST00000563590 GPKOWQ92917 476 aaPredicted RBP eCLIP14.09□□□□□ -0.15
CCDC187-201ENST00000563590 RSRC1Q96IZ7 334 aaKnown RBP14.09□□□□□ -0.15
CCDC187-201ENST00000563590 TRIM6Q9C030 488 aaPredicted RBP14.09□□□□□ -0.15
CCDC187-201ENST00000563590 NLRC4Q9NPP4 1024 aa14.09□□□□□ -0.15
CCDC187-201ENST00000563590 STIM2Q9P246 746 aa14.09□□□□□ -0.15
CCDC187-201ENST00000563590 PACSIN2Q9UNF0 486 aaPredicted RBP14.09□□□□□ -0.15
CCDC187-201ENST00000563590 XDHP47989 1333 aa14.09□□□□□ -0.15
CCDC187-201ENST00000563590 AFF2P51816 1311 aa14.09□□□□□ -0.15
CCDC187-201ENST00000563590 ECM29Q5VYK3 1845 aa14.09□□□□□ -0.15
CCDC187-201ENST00000563590 FTCDO95954 541 aa14.08□□□□□ -0.15
CCDC187-201ENST00000563590 UBA7P41226 1012 aa14.08□□□□□ -0.15
CCDC187-201ENST00000563590 PICALMQ13492 652 aa14.08□□□□□ -0.15
CCDC187-201ENST00000563590 TTMPQ5BVD1 217 aa14.08□□□□□ -0.15
CCDC187-201ENST00000563590 TAF4BQ92750 862 aa14.08□□□□□ -0.15
CCDC187-201ENST00000563590 KIF1CO43896 1103 aaKnown RBP14.08□□□□□ -0.16
CCDC187-201ENST00000563590 EVX2Q03828 476 aa14.08□□□□□ -0.16
CCDC187-201ENST00000563590 IKQ13123 557 aaPredicted RBP14.08□□□□□ -0.16
CCDC187-201ENST00000563590 TTC38Q5R3I4 469 aa14.08□□□□□ -0.16
CCDC187-201ENST00000563590 AKNAD1Q5T1N1 836 aa14.08□□□□□ -0.16
CCDC187-201ENST00000563590 RRAGAQ7L523 313 aa14.08□□□□□ -0.16
CCDC187-201ENST00000563590 PHRF1Q9P1Y6 1649 aaKnown RBP14.08□□□□□ -0.16
CCDC187-201ENST00000563590 MAGEB6P1A0A0J9YX57 407 aa14.08□□□□□ -0.16
CCDC187-201ENST00000563590 CYP19A1P11511 503 aaPredicted RBP14.08□□□□□ -0.16
CCDC187-201ENST00000563590 RFC4P35249 363 aa14.08□□□□□ -0.16
CCDC187-201ENST00000563590 PRCPP42785 496 aa14.08□□□□□ -0.16
CCDC187-201ENST00000563590 NBPF5PQ86XG9 351 aaPredicted RBP14.08□□□□□ -0.16
CCDC187-201ENST00000563590 UHMK1Q8TAS1 419 aaKnown RBP14.08□□□□□ -0.16
CCDC187-201ENST00000563590 ZNF652Q9Y2D9 606 aa14.08□□□□□ -0.16
CCDC187-201ENST00000563590 STRCP1A6NGW2 1772 aa14.08□□□□□ -0.16
CCDC187-201ENST00000563590 RCCD1A6NED2 376 aa14.07□□□□□ -0.16
CCDC187-201ENST00000563590 MYO1EQ12965 1108 aa14.07□□□□□ -0.16
CCDC187-201ENST00000563590 NKX1-1Q15270 411 aaPredicted RBP14.07□□□□□ -0.16
CCDC187-201ENST00000563590 HEATR3Q7Z4Q2 680 aa14.07□□□□□ -0.16
CCDC187-201ENST00000563590 SCN11AQ9UI33 1791 aa14.07□□□□□ -0.16
CCDC187-201ENST00000563590 LRRC10BA6NIK2 292 aa14.07□□□□□ -0.16
CCDC187-201ENST00000563590 ENO4A6NNW6 628 aa14.07□□□□□ -0.16
CCDC187-201ENST00000563590 PPP1R37O75864 691 aa14.07□□□□□ -0.16
CCDC187-201ENST00000563590 GIGYF2Q6Y7W6 1299 aaKnown RBP14.07□□□□□ -0.16
CCDC187-201ENST00000563590 KSR1Q8IVT5 923 aa14.07□□□□□ -0.16
CCDC187-201ENST00000563590 SEPT12Q8IYM1 358 aa14.07□□□□□ -0.16
CCDC187-201ENST00000563590 MB21D1Q8N884 522 aa14.07□□□□□ -0.16
CCDC187-201ENST00000563590 FANCBQ8NB91 859 aa14.07□□□□□ -0.16
CCDC187-201ENST00000563590 GCOM1H8Y6P7 765 aaPredicted RBP14.07□□□□□ -0.16
CCDC187-201ENST00000563590 RIMBP2O15034 1052 aa14.07□□□□□ -0.16
CCDC187-201ENST00000563590 SHOX2O60902 331 aaPredicted RBP14.07□□□□□ -0.16
CCDC187-201ENST00000563590 RPN1P04843 607 aaKnown RBP14.07□□□□□ -0.16
CCDC187-201ENST00000563590 MYZAPP0CAP1 466 aa14.07□□□□□ -0.16
CCDC187-201ENST00000563590 CYP2D6P10635 497 aa14.07□□□□□ -0.16
CCDC187-201ENST00000563590 PRPF4BQ13523 1007 aaKnown RBP14.07□□□□□ -0.16
CCDC187-201ENST00000563590 PAPD7Q5XG87 772 aaKnown RBP14.07□□□□□ -0.16
CCDC187-201ENST00000563590 CATIPQ7Z7H3 387 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms