RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 PURBQ96QR8 312 aaKnown RBP22.05■■□□□ 1.12
NME3-204ENST00000563498 POLR3EQ9NVU0 708 aa22.05■■□□□ 1.12
NME3-204ENST00000563498 PNMA2Q9UL42 364 aa22.05■■□□□ 1.12
NME3-204ENST00000563498 YBX2Q9Y2T7 364 aaKnown RBP22.05■■□□□ 1.12
NME3-204ENST00000563498 SALL3Q9BXA9 1300 aa22.05■■□□□ 1.12
NME3-204ENST00000563498 RBM47A0AV96 593 aaKnown RBP22.04■■□□□ 1.12
NME3-204ENST00000563498 PFKMP08237 780 aa22.04■■□□□ 1.12
NME3-204ENST00000563498 ALDH5A1P51649 535 aaPredicted RBP22.04■■□□□ 1.12
NME3-204ENST00000563498 BAATQ14032 418 aaPredicted RBP22.04■■□□□ 1.12
NME3-204ENST00000563498 SLC4A7Q9Y6M7 1214 aa22.04■■□□□ 1.12
NME3-204ENST00000563498 GBF1Q92538 1859 aa22.04■■□□□ 1.12
NME3-204ENST00000563498 TOP1P11387 765 aaKnown RBP22.03■■□□□ 1.12
NME3-204ENST00000563498 CPT1AP50416 773 aa22.03■■□□□ 1.12
NME3-204ENST00000563498 PURAQ00577 322 aaKnown RBP22.03■■□□□ 1.12
NME3-204ENST00000563498 VPS53Q5VIR6 699 aa22.03■■□□□ 1.12
NME3-204ENST00000563498 SYDE2Q5VT97 1194 aa22.03■■□□□ 1.12
NME3-204ENST00000563498 TTBK2Q6IQ55 1244 aa22.03■■□□□ 1.12
NME3-204ENST00000563498 EVI5LQ96CN4 794 aa22.03■■□□□ 1.12
NME3-204ENST00000563498 VWCEQ96DN2 955 aa22.03■■□□□ 1.12
NME3-204ENST00000563498 WDR11Q9BZH6 1224 aa22.03■■□□□ 1.12
NME3-204ENST00000563498 HELLSQ9NRZ9 838 aa22.03■■□□□ 1.12
NME3-204ENST00000563498 TCP11L1Q9NUJ3 509 aa22.03■■□□□ 1.12
NME3-204ENST00000563498 MTMR7Q9Y216 660 aa22.03■■□□□ 1.12
NME3-204ENST00000563498 PCDHA11Q9Y5I1 949 aa22.03■■□□□ 1.12
NME3-204ENST00000563498 NFIBO00712 420 aa22.02■■□□□ 1.12
NME3-204ENST00000563498 IGFBP4P22692 258 aa22.02■■□□□ 1.12
NME3-204ENST00000563498 SLC16A2P36021 539 aa22.02■■□□□ 1.12
NME3-204ENST00000563498 MRPS5P82675 430 aaKnown RBP22.02■■□□□ 1.12
NME3-204ENST00000563498 PPP2R2DQ66LE6 453 aa22.01■■□□□ 1.11
NME3-204ENST00000563498 TICAM2Q86XR7 235 aa22.01■■□□□ 1.11
NME3-204ENST00000563498 SCLYQ96I15 445 aa22.01■■□□□ 1.11
NME3-204ENST00000563498 TMEM47Q9BQJ4 181 aa22.01■■□□□ 1.11
NME3-204ENST00000563498 TRMT13Q9NUP7 481 aaKnown RBP22.01■■□□□ 1.11
NME3-204ENST00000563498 TNKSO95271 1327 aa22.01■■□□□ 1.11
NME3-204ENST00000563498 PTPDC1A2A3K4 754 aa22■■□□□ 1.11
NME3-204ENST00000563498 NKRFO15226 690 aaKnown RBP eCLIP22■■□□□ 1.11
NME3-204ENST00000563498 ATP2A2P16615 1042 aaKnown RBP22■■□□□ 1.11
NME3-204ENST00000563498 RABGGTBP53611 331 aa22■■□□□ 1.11
NME3-204ENST00000563498 CCDC85BQ15834 202 aaPredicted RBP22■■□□□ 1.11
NME3-204ENST00000563498 BRDTQ58F21 947 aaPredicted RBP22■■□□□ 1.11
NME3-204ENST00000563498 CLEC4DQ8WXI8 215 aa22■■□□□ 1.11
NME3-204ENST00000563498 MPHOSPH6Q99547 160 aaKnown RBP22■■□□□ 1.11
NME3-204ENST00000563498 MTG1Q9BT17 334 aaPredicted RBP22■■□□□ 1.11
NME3-204ENST00000563498 GPHNQ9NQX3 736 aaPredicted RBP22■■□□□ 1.11
NME3-204ENST00000563498 ZMYM6O95789 1325 aa22■■□□□ 1.11
NME3-204ENST00000563498 MYO9BQ13459 2157 aa21.99■■□□□ 1.11
NME3-204ENST00000563498 CHD7Q9P2D1 2997 aa21.99■■□□□ 1.11
NME3-204ENST00000563498 FGAP02671 866 aa21.99■■□□□ 1.11
NME3-204ENST00000563498 RFC2P35250 354 aa21.99■■□□□ 1.11
NME3-204ENST00000563498 SLC30A10Q6XR72 485 aa21.99■■□□□ 1.11
NME3-204ENST00000563498 RNF207Q6ZRF8 634 aa21.99■■□□□ 1.11
NME3-204ENST00000563498 ADAMTS19Q8TE59 1207 aa21.99■■□□□ 1.11
NME3-204ENST00000563498 TSPYL2Q9H2G4 693 aaPredicted RBP21.99■■□□□ 1.11
NME3-204ENST00000563498 TOMM22Q9NS69 142 aa21.99■■□□□ 1.11
NME3-204ENST00000563498 WDR19Q8NEZ3 1342 aa21.99■■□□□ 1.11
NME3-204ENST00000563498 RAD50Q92878 1312 aa21.99■■□□□ 1.11
NME3-204ENST00000563498 ZBBXA8MT70 800 aa21.98■■□□□ 1.11
NME3-204ENST00000563498 KPNA6O60684 536 aa21.98■■□□□ 1.11
NME3-204ENST00000563498 MYL3P08590 195 aa21.98■■□□□ 1.11
NME3-204ENST00000563498 PDHBP11177 359 aa21.98■■□□□ 1.11
NME3-204ENST00000563498 CYP2C9P11712 490 aa21.98■■□□□ 1.11
NME3-204ENST00000563498 EDNRBP24530 442 aa21.98■■□□□ 1.11
NME3-204ENST00000563498 NFRKBQ6P4R8 1299 aa21.98■■□□□ 1.11
NME3-204ENST00000563498 DNERQ8NFT8 737 aa21.98■■□□□ 1.11
NME3-204ENST00000563498 OR6J1Q8NGC5 347 aa21.98■■□□□ 1.11
NME3-204ENST00000563498 SCFD2Q8WU76 684 aa21.98■■□□□ 1.11
NME3-204ENST00000563498 TTC14Q96N46 770 aa21.98■■□□□ 1.11
NME3-204ENST00000563498 GPCPD1Q9NPB8 672 aa21.98■■□□□ 1.11
NME3-204ENST00000563498 ZBTB47Q9UFB7 747 aaPredicted RBP21.98■■□□□ 1.11
NME3-204ENST00000563498 FRMPD2Q68DX3 1309 aaPredicted RBP21.98■■□□□ 1.11
NME3-204ENST00000563498 A6NJR5 290 aa21.97■■□□□ 1.11
NME3-204ENST00000563498 PITPNM1O00562 1244 aa21.97■■□□□ 1.11
NME3-204ENST00000563498 SNHG28P0DPA3 235 aa21.97■■□□□ 1.11
NME3-204ENST00000563498 PCP11498 1178 aaKnown RBP21.97■■□□□ 1.11
NME3-204ENST00000563498 ACTN1P12814 892 aa21.97■■□□□ 1.11
NME3-204ENST00000563498 MYOGP15173 224 aa21.97■■□□□ 1.11
NME3-204ENST00000563498 CALML3P27482 149 aa21.97■■□□□ 1.11
NME3-204ENST00000563498 PTPN11Q06124 597 aaPredicted RBP21.97■■□□□ 1.11
NME3-204ENST00000563498 PDE4DQ08499 809 aa21.97■■□□□ 1.11
NME3-204ENST00000563498 TTLL4Q14679 1199 aa21.97■■□□□ 1.11
NME3-204ENST00000563498 PPP2R5BQ15173 497 aa21.97■■□□□ 1.11
NME3-204ENST00000563498 MCMDC2Q4G0Z9 681 aa21.97■■□□□ 1.11
NME3-204ENST00000563498 RRP12Q5JTH9 1297 aaKnown RBP21.97■■□□□ 1.11
NME3-204ENST00000563498 SCN10AQ9Y5Y9 1956 aa21.97■■□□□ 1.11
NME3-204ENST00000563498 B4DLN1 442 aa21.96■■□□□ 1.11
NME3-204ENST00000563498 MRPL12P52815 198 aaKnown RBP21.96■■□□□ 1.11
NME3-204ENST00000563498 RPS6P62753 249 aaKnown RBP21.96■■□□□ 1.11
NME3-204ENST00000563498 ZNF543Q08ER8 600 aa21.96■■□□□ 1.11
NME3-204ENST00000563498 NBPF20Q3BBV1 942 aa21.96■■□□□ 1.11
NME3-204ENST00000563498 TMEM67Q5HYA8 995 aa21.96■■□□□ 1.11
NME3-204ENST00000563498 IL27Q8NEV9 243 aa21.96■■□□□ 1.11
NME3-204ENST00000563498 HSPD1P10809 573 aaKnown RBP21.95■■□□□ 1.1
NME3-204ENST00000563498 POU3F3P20264 500 aaPredicted RBP21.95■■□□□ 1.1
NME3-204ENST00000563498 PDE1AP54750 535 aa21.95■■□□□ 1.1
NME3-204ENST00000563498 ANKRD45Q5TZF3 282 aa21.95■■□□□ 1.1
NME3-204ENST00000563498 DEFB128Q7Z7B8 93 aa21.95■■□□□ 1.1
NME3-204ENST00000563498 RGS22Q8NE09 1264 aa21.95■■□□□ 1.1
NME3-204ENST00000563498 PHOSPHO2Q8TCD6 241 aa21.95■■□□□ 1.1
NME3-204ENST00000563498 FAM227BQ96M60 508 aa21.95■■□□□ 1.1
NME3-204ENST00000563498 SLC9A7Q96T83 725 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms