RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 SLC4A3P48751 1232 aa9.3□□□□□ -0.92
HERPUD1-206ENST00000563343 OAZ1P54368 228 aa9.3□□□□□ -0.92
HERPUD1-206ENST00000563343 DEFB103AP81534 67 aa9.3□□□□□ -0.92
HERPUD1-206ENST00000563343 ATP8B2P98198 1209 aa9.3□□□□□ -0.92
HERPUD1-206ENST00000563343 TCF15Q12870 199 aa9.3□□□□□ -0.92
HERPUD1-206ENST00000563343 PUS10Q3MIT2 529 aaKnown RBP9.3□□□□□ -0.92
HERPUD1-206ENST00000563343 SLFNL1Q499Z3 407 aa9.3□□□□□ -0.92
HERPUD1-206ENST00000563343 IER5LQ5T953 404 aa9.3□□□□□ -0.92
HERPUD1-206ENST00000563343 NOL8Q76FK4 1167 aaKnown RBP9.3□□□□□ -0.92
HERPUD1-206ENST00000563343 MORC4Q8TE76 937 aa9.3□□□□□ -0.92
HERPUD1-206ENST00000563343 PPP1R13LQ8WUF5 828 aa9.3□□□□□ -0.92
HERPUD1-206ENST00000563343 CTAGE1Q96RT6 745 aa9.3□□□□□ -0.92
HERPUD1-206ENST00000563343 ATP8A2Q9NTI2 1148 aa9.3□□□□□ -0.92
HERPUD1-206ENST00000563343 NYAP2Q9P242 653 aa9.3□□□□□ -0.92
HERPUD1-206ENST00000563343 PRKAG3Q9UGI9 489 aa9.3□□□□□ -0.92
HERPUD1-206ENST00000563343 IGKV6D-41A0A0C4DH26 115 aa9.29□□□□□ -0.92
HERPUD1-206ENST00000563343 ASB14A6NK59 587 aa9.29□□□□□ -0.92
HERPUD1-206ENST00000563343 USP17L12C9JPN9 530 aa9.29□□□□□ -0.92
HERPUD1-206ENST00000563343 USP17L21D6R901 530 aa9.29□□□□□ -0.92
HERPUD1-206ENST00000563343 H3BQ06 376 aaPredicted RBP9.29□□□□□ -0.92
HERPUD1-206ENST00000563343 RAD21O60216 631 aa9.29□□□□□ -0.92
HERPUD1-206ENST00000563343 ZBED4O75132 1171 aa9.29□□□□□ -0.92
HERPUD1-206ENST00000563343 BCAR3O75815 825 aa9.29□□□□□ -0.92
HERPUD1-206ENST00000563343 GJB5O95377 273 aa9.29□□□□□ -0.92
HERPUD1-206ENST00000563343 TRIM27P14373 513 aa9.29□□□□□ -0.92
HERPUD1-206ENST00000563343 OS9Q13438 667 aaPredicted RBP9.29□□□□□ -0.92
HERPUD1-206ENST00000563343 DUSP28Q4G0W2 176 aa9.29□□□□□ -0.92
HERPUD1-206ENST00000563343 BMP8AQ7Z5Y6 402 aa9.29□□□□□ -0.92
HERPUD1-206ENST00000563343 IFNLR1Q8IU57 520 aaPredicted RBP9.29□□□□□ -0.92
HERPUD1-206ENST00000563343 FBXO16Q8IX29 292 aaPredicted RBP9.29□□□□□ -0.92
HERPUD1-206ENST00000563343 MFSD14AQ96MC6 490 aa9.29□□□□□ -0.92
HERPUD1-206ENST00000563343 TGS1Q96RS0 853 aaKnown RBP9.29□□□□□ -0.92
HERPUD1-206ENST00000563343 FTOQ9C0B1 505 aaKnown RBP eCLIP9.29□□□□□ -0.92
HERPUD1-206ENST00000563343 MTUS1Q9ULD2 1270 aa9.29□□□□□ -0.92
HERPUD1-206ENST00000563343 ZFHX2Q9C0A1 2572 aaPredicted RBP9.29□□□□□ -0.92
HERPUD1-206ENST00000563343 MYH7BA7E2Y1 1941 aa9.29□□□□□ -0.92
HERPUD1-206ENST00000563343 MBD4O95243 580 aa9.28□□□□□ -0.92
HERPUD1-206ENST00000563343 CHGBP05060 677 aa9.28□□□□□ -0.92
HERPUD1-206ENST00000563343 RASA1P20936 1047 aa9.28□□□□□ -0.92
HERPUD1-206ENST00000563343 KCNJ6P48051 423 aa9.28□□□□□ -0.92
HERPUD1-206ENST00000563343 FOXK2Q01167 660 aa9.28□□□□□ -0.92
HERPUD1-206ENST00000563343 TTF1Q15361 905 aaPredicted RBP9.28□□□□□ -0.92
HERPUD1-206ENST00000563343 NBPF20Q3BBV1 942 aa9.28□□□□□ -0.92
HERPUD1-206ENST00000563343 HERC4Q5GLZ8 1057 aaPredicted RBP9.28□□□□□ -0.92
HERPUD1-206ENST00000563343 CTR9Q6PD62 1173 aa9.28□□□□□ -0.92
HERPUD1-206ENST00000563343 EEPD1Q7L9B9 569 aa9.28□□□□□ -0.92
HERPUD1-206ENST00000563343 ADHFE1Q8IWW8 467 aa9.28□□□□□ -0.92
HERPUD1-206ENST00000563343 KIFC2Q96AC6 838 aa9.28□□□□□ -0.92
HERPUD1-206ENST00000563343 PABPC5Q96DU9 382 aaKnown RBP9.28□□□□□ -0.92
HERPUD1-206ENST00000563343 MRPL38Q96DV4 380 aaKnown RBP9.28□□□□□ -0.92
HERPUD1-206ENST00000563343 RAD9AQ99638 391 aa9.28□□□□□ -0.92
HERPUD1-206ENST00000563343 C17orf80Q9BSJ5 609 aa9.28□□□□□ -0.92
HERPUD1-206ENST00000563343 ACAD9Q9H845 621 aa9.28□□□□□ -0.92
HERPUD1-206ENST00000563343 VTA1Q9NP79 307 aa9.28□□□□□ -0.92
HERPUD1-206ENST00000563343 HOMER2Q9NSB8 354 aa9.28□□□□□ -0.92
HERPUD1-206ENST00000563343 POLR3EQ9NVU0 708 aa9.28□□□□□ -0.92
HERPUD1-206ENST00000563343 CACNA1HO95180 2353 aa9.28□□□□□ -0.92
HERPUD1-206ENST00000563343 KIAA1671Q9BY89 1806 aa9.27□□□□□ -0.93
HERPUD1-206ENST00000563343 RBM47A0AV96 593 aaKnown RBP9.27□□□□□ -0.93
HERPUD1-206ENST00000563343 CXCL10P02778 98 aa9.27□□□□□ -0.93
HERPUD1-206ENST00000563343 ADD2P35612 726 aa9.27□□□□□ -0.93
HERPUD1-206ENST00000563343 LTBRP36941 435 aa9.27□□□□□ -0.93
HERPUD1-206ENST00000563343 PTPN5P54829 565 aa9.27□□□□□ -0.93
HERPUD1-206ENST00000563343 PTPN11Q06124 597 aaPredicted RBP9.27□□□□□ -0.93
HERPUD1-206ENST00000563343 LRRFIP1Q32MZ4 808 aaKnown RBP9.27□□□□□ -0.93
HERPUD1-206ENST00000563343 NFRKBQ6P4R8 1299 aa9.27□□□□□ -0.93
HERPUD1-206ENST00000563343 KIAA1211Q6ZU35 1233 aa9.27□□□□□ -0.93
HERPUD1-206ENST00000563343 SP7Q8TDD2 431 aaPredicted RBP9.27□□□□□ -0.93
HERPUD1-206ENST00000563343 DHX38Q92620 1227 aaKnown RBP9.27□□□□□ -0.93
HERPUD1-206ENST00000563343 MKL1Q969V6 931 aa9.27□□□□□ -0.93
HERPUD1-206ENST00000563343 PURBQ96QR8 312 aaKnown RBP9.27□□□□□ -0.93
HERPUD1-206ENST00000563343 MTG1Q9BT17 334 aaPredicted RBP9.27□□□□□ -0.93
HERPUD1-206ENST00000563343 RNF146Q9NTX7 359 aa9.27□□□□□ -0.93
HERPUD1-206ENST00000563343 CYP39A1Q9NYL5 469 aa9.27□□□□□ -0.93
HERPUD1-206ENST00000563343 MUTYHQ9UIF7 546 aa9.27□□□□□ -0.93
HERPUD1-206ENST00000563343 FEM1BQ9UK73 627 aa9.27□□□□□ -0.93
HERPUD1-206ENST00000563343 NBNO60934 754 aa9.26□□□□□ -0.93
HERPUD1-206ENST00000563343 MYL3P08590 195 aa9.26□□□□□ -0.93
HERPUD1-206ENST00000563343 FDX1P10109 184 aa9.26□□□□□ -0.93
HERPUD1-206ENST00000563343 RBL2Q08999 1139 aa9.26□□□□□ -0.93
HERPUD1-206ENST00000563343 BFSP2Q13515 415 aa9.26□□□□□ -0.93
HERPUD1-206ENST00000563343 MUM1L1Q5H9M0 696 aa9.26□□□□□ -0.93
HERPUD1-206ENST00000563343 CNKSR3Q6P9H4 555 aa9.26□□□□□ -0.93
HERPUD1-206ENST00000563343 AACSQ86V21 672 aa9.26□□□□□ -0.93
HERPUD1-206ENST00000563343 RETREG2Q8NC44 543 aa9.26□□□□□ -0.93
HERPUD1-206ENST00000563343 GMCL1P1Q8NEA9 526 aa9.26□□□□□ -0.93
HERPUD1-206ENST00000563343 AFAP1L1Q8TED9 768 aa9.26□□□□□ -0.93
HERPUD1-206ENST00000563343 EDAQ92838 391 aa9.26□□□□□ -0.93
HERPUD1-206ENST00000563343 C1orf115Q9H7X2 142 aa9.26□□□□□ -0.93
HERPUD1-206ENST00000563343 COG6Q9Y2V7 657 aa9.26□□□□□ -0.93
HERPUD1-206ENST00000563343 DMDP11532 3685 aa9.25□□□□□ -0.93
HERPUD1-206ENST00000563343 VPS13AQ96RL7 3174 aa9.25□□□□□ -0.93
HERPUD1-206ENST00000563343 ABHD14A-ACY1A0A1B0GW23 586 aa9.25□□□□□ -0.93
HERPUD1-206ENST00000563343 A6NJR5 290 aa9.25□□□□□ -0.93
HERPUD1-206ENST00000563343 GOLIM4O00461 696 aa9.25□□□□□ -0.93
HERPUD1-206ENST00000563343 ANP32CO43423 234 aa9.25□□□□□ -0.93
HERPUD1-206ENST00000563343 GFRA3O60609 400 aa9.25□□□□□ -0.93
HERPUD1-206ENST00000563343 CPT1AP50416 773 aa9.25□□□□□ -0.93
HERPUD1-206ENST00000563343 NUBP1P53384 320 aa9.25□□□□□ -0.93
HERPUD1-206ENST00000563343 HTRA4P83105 476 aaPredicted RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms