RNA–Protein interactions for RNA: ENST00000563255.1

CDH11-207, Transcript of cadherin 11, humanhuman

TSL 5

Gene CDH11, Length 545 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-207ENST00000563255 USH1GQ495M9 461 aa16.92■□□□□ 0.3
CDH11-207ENST00000563255 POTEEQ6S8J3 1075 aa16.92■□□□□ 0.3
CDH11-207ENST00000563255 DIS3L2Q8IYB7 885 aaKnown RBP16.92■□□□□ 0.3
CDH11-207ENST00000563255 BLIDQ8IZY5 108 aa16.92■□□□□ 0.3
CDH11-207ENST00000563255 CPXCR1Q8N123 301 aa16.92■□□□□ 0.3
CDH11-207ENST00000563255 SH3TC2Q8TF17 1288 aa16.92■□□□□ 0.3
CDH11-207ENST00000563255 AGBL1Q96MI9 1066 aa16.92■□□□□ 0.3
CDH11-207ENST00000563255 MAF1Q9H063 256 aa16.92■□□□□ 0.3
CDH11-207ENST00000563255 RABGAP1Q9Y3P9 1069 aa16.92■□□□□ 0.3
CDH11-207ENST00000563255 MGAMO43451 1857 aa16.92■□□□□ 0.3
CDH11-207ENST00000563255 PLXNB2O15031 1838 aa16.91■□□□□ 0.3
CDH11-207ENST00000563255 BTBD18B2RXH4 712 aa16.91■□□□□ 0.3
CDH11-207ENST00000563255 GCLCP48506 637 aaPredicted RBP16.91■□□□□ 0.3
CDH11-207ENST00000563255 ADCY7P51828 1080 aa16.91■□□□□ 0.3
CDH11-207ENST00000563255 RESTQ13127 1097 aa16.91■□□□□ 0.3
CDH11-207ENST00000563255 MCTP1Q6DN14 999 aa16.91■□□□□ 0.3
CDH11-207ENST00000563255 BRAPQ7Z569 592 aa16.91■□□□□ 0.3
CDH11-207ENST00000563255 CUL5Q93034 780 aa16.91■□□□□ 0.3
CDH11-207ENST00000563255 PARK7Q99497 189 aaKnown RBP16.91■□□□□ 0.3
CDH11-207ENST00000563255 TEX13BQ9BXU2 312 aa16.91■□□□□ 0.3
CDH11-207ENST00000563255 PSTPIP2Q9H939 334 aa16.91■□□□□ 0.3
CDH11-207ENST00000563255 BTBD7Q9P203 1132 aa16.91■□□□□ 0.3
CDH11-207ENST00000563255 CPA4Q9UI42 421 aa16.91■□□□□ 0.3
CDH11-207ENST00000563255 ATP6V1DQ9Y5K8 247 aa16.91■□□□□ 0.3
CDH11-207ENST00000563255 LCTP09848 1927 aa16.91■□□□□ 0.3
CDH11-207ENST00000563255 CNMDO75829 334 aa16.9■□□□□ 0.3
CDH11-207ENST00000563255 GNRH1P01148 92 aa16.9■□□□□ 0.3
CDH11-207ENST00000563255 STAT3P40763 770 aa16.9■□□□□ 0.3
CDH11-207ENST00000563255 CLK2P49760 499 aaKnown RBP16.9■□□□□ 0.3
CDH11-207ENST00000563255 FXR1P51114 621 aaKnown RBP eCLIP16.9■□□□□ 0.3
CDH11-207ENST00000563255 GHRHRQ02643 423 aa16.9■□□□□ 0.3
CDH11-207ENST00000563255 GNL2Q13823 731 aaKnown RBP16.9■□□□□ 0.3
CDH11-207ENST00000563255 MCTP2Q6DN12 878 aa16.9■□□□□ 0.3
CDH11-207ENST00000563255 TNFRSF25Q93038 417 aa16.9■□□□□ 0.3
CDH11-207ENST00000563255 MAP3K20Q9NYL2 800 aaKnown RBP16.9■□□□□ 0.3
CDH11-207ENST00000563255 RBPJLQ9UBG7 517 aa16.9■□□□□ 0.3
CDH11-207ENST00000563255 PLXNA1Q9UIW2 1896 aa16.9■□□□□ 0.3
CDH11-207ENST00000563255 KIF28PB7ZC32 967 aa16.89■□□□□ 0.29
CDH11-207ENST00000563255 PIK3CDO00329 1044 aa16.89■□□□□ 0.29
CDH11-207ENST00000563255 OPLAHO14841 1288 aa16.89■□□□□ 0.29
CDH11-207ENST00000563255 CYP2C8P10632 490 aa16.89■□□□□ 0.29
CDH11-207ENST00000563255 ALAS1P13196 640 aa16.89■□□□□ 0.29
CDH11-207ENST00000563255 COPB2P35606 906 aa16.89■□□□□ 0.29
CDH11-207ENST00000563255 FOXD4L5Q5VV16 416 aaPredicted RBP16.89■□□□□ 0.29
CDH11-207ENST00000563255 SNRNP48Q6IEG0 339 aaKnown RBP16.89■□□□□ 0.29
CDH11-207ENST00000563255 C17orf99Q6UX52 265 aa16.89■□□□□ 0.29
CDH11-207ENST00000563255 FERMT3Q86UX7 667 aa16.89■□□□□ 0.29
CDH11-207ENST00000563255 MCF2L2Q86YR7 1114 aa16.89■□□□□ 0.29
CDH11-207ENST00000563255 RIOX2Q8IUF8 465 aa16.89■□□□□ 0.29
CDH11-207ENST00000563255 NOSTRINQ8IVI9 506 aa16.89■□□□□ 0.29
CDH11-207ENST00000563255 CHST13Q8NET6 341 aa16.89■□□□□ 0.29
CDH11-207ENST00000563255 OXER1Q8TDS5 423 aa16.89■□□□□ 0.29
CDH11-207ENST00000563255 SMCR8Q8TEV9 937 aaPredicted RBP16.89■□□□□ 0.29
CDH11-207ENST00000563255 FOXD4L4Q8WXT5 416 aaPredicted RBP16.89■□□□□ 0.29
CDH11-207ENST00000563255 TRERF1Q96PN7 1200 aa16.89■□□□□ 0.29
CDH11-207ENST00000563255 SPATC1LQ9H0A9 340 aa16.89■□□□□ 0.29
CDH11-207ENST00000563255 PCDHA6Q9UN73 950 aa16.89■□□□□ 0.29
CDH11-207ENST00000563255 COLQQ9Y215 455 aaPredicted RBP16.89■□□□□ 0.29
CDH11-207ENST00000563255 PCDHA8Q9Y5H6 950 aa16.89■□□□□ 0.29
CDH11-207ENST00000563255 MEIS2O14770 477 aa16.88■□□□□ 0.29
CDH11-207ENST00000563255 SLC25A27O95847 323 aa16.88■□□□□ 0.29
CDH11-207ENST00000563255 PSMC4P43686 418 aa16.88■□□□□ 0.29
CDH11-207ENST00000563255 NR5A1Q13285 461 aa16.88■□□□□ 0.29
CDH11-207ENST00000563255 REXO1Q8N1G1 1221 aaKnown RBP16.88■□□□□ 0.29
CDH11-207ENST00000563255 CLEC4DQ8WXI8 215 aa16.88■□□□□ 0.29
CDH11-207ENST00000563255 TNPO1Q92973 898 aaKnown RBP16.88■□□□□ 0.29
CDH11-207ENST00000563255 MORF4L1Q9UBU8 362 aa16.88■□□□□ 0.29
CDH11-207ENST00000563255 RIPK3Q9Y572 518 aa16.88■□□□□ 0.29
CDH11-207ENST00000563255 ADAMTS3O15072 1205 aa16.87■□□□□ 0.29
CDH11-207ENST00000563255 TAL1P17542 331 aaPredicted RBP16.87■□□□□ 0.29
CDH11-207ENST00000563255 PRMT2P55345 433 aa16.87■□□□□ 0.29
CDH11-207ENST00000563255 PLS1Q14651 629 aa16.87■□□□□ 0.29
CDH11-207ENST00000563255 MUM1L1Q5H9M0 696 aa16.87■□□□□ 0.29
CDH11-207ENST00000563255 CLEC17AQ6ZS10 378 aa16.87■□□□□ 0.29
CDH11-207ENST00000563255 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.87■□□□□ 0.29
CDH11-207ENST00000563255 KRT25Q7Z3Z0 450 aa16.87■□□□□ 0.29
CDH11-207ENST00000563255 PAGR1Q9BTK6 254 aa16.87■□□□□ 0.29
CDH11-207ENST00000563255 ACAD9Q9H845 621 aa16.87■□□□□ 0.29
CDH11-207ENST00000563255 TXNRD2Q9NNW7 524 aa16.87■□□□□ 0.29
CDH11-207ENST00000563255 RNF146Q9NTX7 359 aa16.87■□□□□ 0.29
CDH11-207ENST00000563255 FBXO40Q9UH90 709 aa16.87■□□□□ 0.29
CDH11-207ENST00000563255 ADGRA2Q96PE1 1338 aa16.87■□□□□ 0.29
CDH11-207ENST00000563255 GCOM1H8Y6P7 765 aaPredicted RBP16.86■□□□□ 0.29
CDH11-207ENST00000563255 CFBP00751 764 aa16.86■□□□□ 0.29
CDH11-207ENST00000563255 FOSP01100 380 aaPredicted RBP16.86■□□□□ 0.29
CDH11-207ENST00000563255 POLR2MP0CAP2 368 aa16.86■□□□□ 0.29
CDH11-207ENST00000563255 HOXD10P28358 340 aa16.86■□□□□ 0.29
CDH11-207ENST00000563255 CTGFP29279 349 aa16.86■□□□□ 0.29
CDH11-207ENST00000563255 HSD17B4P51659 736 aa16.86■□□□□ 0.29
CDH11-207ENST00000563255 ERVK-9P63128 1117 aa16.86■□□□□ 0.29
CDH11-207ENST00000563255 ERVK-24P63145 666 aa16.86■□□□□ 0.29
CDH11-207ENST00000563255 AP3B2Q13367 1082 aa16.86■□□□□ 0.29
CDH11-207ENST00000563255 Q3C1V9 767 aa16.86■□□□□ 0.29
CDH11-207ENST00000563255 MYSM1Q5VVJ2 828 aa16.86■□□□□ 0.29
CDH11-207ENST00000563255 ATL3Q6DD88 541 aa16.86■□□□□ 0.29
CDH11-207ENST00000563255 SHCBP1Q8NEM2 672 aa16.86■□□□□ 0.29
CDH11-207ENST00000563255 GPRC5AQ8NFJ5 357 aa16.86■□□□□ 0.29
CDH11-207ENST00000563255 TRIM47Q96LD4 638 aa16.86■□□□□ 0.29
CDH11-207ENST00000563255 MOV10L1Q9BXT6 1211 aaKnown RBP16.86■□□□□ 0.29
CDH11-207ENST00000563255 BIN2Q9UBW5 565 aaPredicted RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms