RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 CPVLQ9H3G5 476 aa19.28■□□□□ 0.68
CDT1-202ENST00000562747 SYNRGQ9UMZ2 1314 aa19.27■□□□□ 0.68
CDT1-202ENST00000562747 PQBP1O60828 265 aaKnown RBP19.27■□□□□ 0.68
CDT1-202ENST00000562747 DDAH1O94760 285 aa19.27■□□□□ 0.68
CDT1-202ENST00000562747 COL9A3Q14050 684 aaPredicted RBP19.27■□□□□ 0.68
CDT1-202ENST00000562747 CDC37Q16543 378 aaPredicted RBP19.27■□□□□ 0.68
CDT1-202ENST00000562747 ADCK5Q3MIX3 580 aa19.27■□□□□ 0.68
CDT1-202ENST00000562747 DHX32Q7L7V1 743 aaKnown RBP19.27■□□□□ 0.68
CDT1-202ENST00000562747 ZNF467Q7Z7K2 595 aaPredicted RBP19.27■□□□□ 0.68
CDT1-202ENST00000562747 RNF180Q86T96 592 aa19.27■□□□□ 0.68
CDT1-202ENST00000562747 ZNF654Q8IZM8 581 aa19.27■□□□□ 0.68
CDT1-202ENST00000562747 A1CFQ9NQ94 594 aaKnown RBP19.27■□□□□ 0.68
CDT1-202ENST00000562747 CCDC69A6NI79 296 aa19.26■□□□□ 0.67
CDT1-202ENST00000562747 KIAA0355O15063 1070 aa19.26■□□□□ 0.67
CDT1-202ENST00000562747 DHX16O60231 1041 aaKnown RBP19.26■□□□□ 0.67
CDT1-202ENST00000562747 AKR1A1P14550 325 aa19.26■□□□□ 0.67
CDT1-202ENST00000562747 IRX5P78411 483 aaPredicted RBP19.26■□□□□ 0.67
CDT1-202ENST00000562747 EXOSC10Q01780 885 aaKnown RBP19.26■□□□□ 0.67
CDT1-202ENST00000562747 MUM1L1Q5H9M0 696 aa19.26■□□□□ 0.67
CDT1-202ENST00000562747 NFXL1Q6ZNB6 911 aa19.26■□□□□ 0.67
CDT1-202ENST00000562747 RNPC3Q96LT9 517 aaKnown RBP19.26■□□□□ 0.67
CDT1-202ENST00000562747 JMJD4Q9H9V9 463 aa19.26■□□□□ 0.67
CDT1-202ENST00000562747 GPHNQ9NQX3 736 aaPredicted RBP19.26■□□□□ 0.67
CDT1-202ENST00000562747 SNX14Q9Y5W7 946 aa19.26■□□□□ 0.67
CDT1-202ENST00000562747 MCM3APO60318 1980 aa19.26■□□□□ 0.67
CDT1-202ENST00000562747 MYADML2A6NDP7 307 aa19.25■□□□□ 0.67
CDT1-202ENST00000562747 SNAI1O95863 264 aaPredicted RBP19.25■□□□□ 0.67
CDT1-202ENST00000562747 MAMDC4Q6UXC1 1216 aa19.25■□□□□ 0.67
CDT1-202ENST00000562747 SGMS1Q86VZ5 419 aa19.25■□□□□ 0.67
CDT1-202ENST00000562747 FAM133AQ8N9E0 248 aa19.25■□□□□ 0.67
CDT1-202ENST00000562747 MTMR8Q96EF0 704 aa19.25■□□□□ 0.67
CDT1-202ENST00000562747 USP26Q9BXU7 913 aa19.25■□□□□ 0.67
CDT1-202ENST00000562747 SYNGAP1Q96PV0 1343 aa19.25■□□□□ 0.67
CDT1-202ENST00000562747 PRUNE2Q8WUY3 3088 aa19.24■□□□□ 0.67
CDT1-202ENST00000562747 ADCY6O43306 1168 aa19.24■□□□□ 0.67
CDT1-202ENST00000562747 CALM1P0DP23 149 aa19.24■□□□□ 0.67
CDT1-202ENST00000562747 CALM2P0DP24 149 aa19.24■□□□□ 0.67
CDT1-202ENST00000562747 CALM3P0DP25 149 aa19.24■□□□□ 0.67
CDT1-202ENST00000562747 KIF5BP33176 963 aa19.24■□□□□ 0.67
CDT1-202ENST00000562747 FAAP100Q0VG06 881 aa19.24■□□□□ 0.67
CDT1-202ENST00000562747 QRICH1Q2TAL8 776 aa19.24■□□□□ 0.67
CDT1-202ENST00000562747 CCSAPQ6IQ19 270 aaPredicted RBP19.24■□□□□ 0.67
CDT1-202ENST00000562747 CTCFLQ8NI51 663 aaPredicted RBP19.24■□□□□ 0.67
CDT1-202ENST00000562747 NUP133Q8WUM0 1156 aa19.24■□□□□ 0.67
CDT1-202ENST00000562747 LRRC2Q9BYS8 371 aa19.24■□□□□ 0.67
CDT1-202ENST00000562747 MAF1Q9H063 256 aa19.24■□□□□ 0.67
CDT1-202ENST00000562747 RIOX1Q9H6W3 641 aa19.24■□□□□ 0.67
CDT1-202ENST00000562747 VAT1LQ9HCJ6 419 aa19.24■□□□□ 0.67
CDT1-202ENST00000562747 CYP39A1Q9NYL5 469 aa19.24■□□□□ 0.67
CDT1-202ENST00000562747 CNPY2Q9Y2B0 182 aa19.24■□□□□ 0.67
CDT1-202ENST00000562747 SLC12A7Q9Y666 1083 aa19.24■□□□□ 0.67
CDT1-202ENST00000562747 LRRC37A2A6NM11 1700 aa19.23■□□□□ 0.67
CDT1-202ENST00000562747 NFIBO00712 420 aa19.23■□□□□ 0.67
CDT1-202ENST00000562747 EIF5BO60841 1220 aaKnown RBP19.23■□□□□ 0.67
CDT1-202ENST00000562747 RAG1P15918 1043 aa19.23■□□□□ 0.67
CDT1-202ENST00000562747 ACLYP53396 1101 aa19.23■□□□□ 0.67
CDT1-202ENST00000562747 FPGSQ05932 587 aa19.23■□□□□ 0.67
CDT1-202ENST00000562747 NSMFQ6X4W1 530 aa19.23■□□□□ 0.67
CDT1-202ENST00000562747 ANKRD33Q7Z3H0 272 aa19.23■□□□□ 0.67
CDT1-202ENST00000562747 FBXO11Q86XK2 927 aa19.23■□□□□ 0.67
CDT1-202ENST00000562747 KLHDC9Q8NEP7 349 aa19.23■□□□□ 0.67
CDT1-202ENST00000562747 CLEC4DQ8WXI8 215 aa19.23■□□□□ 0.67
CDT1-202ENST00000562747 FGD4Q96M96 766 aa19.23■□□□□ 0.67
CDT1-202ENST00000562747 TMEM39AQ9NV64 488 aa19.23■□□□□ 0.67
CDT1-202ENST00000562747 ABCB11O95342 1321 aa19.23■□□□□ 0.67
CDT1-202ENST00000562747 ZBTB5O15062 677 aa19.22■□□□□ 0.67
CDT1-202ENST00000562747 PSMA5P28066 241 aa19.22■□□□□ 0.67
CDT1-202ENST00000562747 SMARCA1P28370 1054 aa19.22■□□□□ 0.67
CDT1-202ENST00000562747 GNAQP50148 359 aa19.22■□□□□ 0.67
CDT1-202ENST00000562747 USH1GQ495M9 461 aa19.22■□□□□ 0.67
CDT1-202ENST00000562747 JAKMIP1Q96N16 626 aaKnown RBP19.22■□□□□ 0.67
CDT1-202ENST00000562747 LZTS2Q9BRK4 669 aa19.22■□□□□ 0.67
CDT1-202ENST00000562747 TSEN34Q9BSV6 310 aaKnown RBP19.22■□□□□ 0.67
CDT1-202ENST00000562747 MYL10Q9BUA6 226 aa19.22■□□□□ 0.67
CDT1-202ENST00000562747 STARD7Q9NQZ5 370 aa19.22■□□□□ 0.67
CDT1-202ENST00000562747 ZHX1Q9UKY1 873 aaPredicted RBP19.22■□□□□ 0.67
CDT1-202ENST00000562747 MYH6P13533 1939 aa19.21■□□□□ 0.67
CDT1-202ENST00000562747 FOSL2P15408 326 aa19.21■□□□□ 0.67
CDT1-202ENST00000562747 CNTN2Q02246 1040 aa19.21■□□□□ 0.67
CDT1-202ENST00000562747 TRAF1Q13077 416 aa19.21■□□□□ 0.67
CDT1-202ENST00000562747 BAATQ14032 418 aaPredicted RBP19.21■□□□□ 0.67
CDT1-202ENST00000562747 KCNA10Q16322 511 aa19.21■□□□□ 0.67
CDT1-202ENST00000562747 BLOC1S2Q6QNY1 142 aa19.21■□□□□ 0.67
CDT1-202ENST00000562747 SYNE3Q6ZMZ3 975 aa19.21■□□□□ 0.67
CDT1-202ENST00000562747 RNF207Q6ZRF8 634 aa19.21■□□□□ 0.67
CDT1-202ENST00000562747 RGS22Q8NE09 1264 aa19.21■□□□□ 0.67
CDT1-202ENST00000562747 AMNQ9BXJ7 453 aa19.21■□□□□ 0.67
CDT1-202ENST00000562747 MRPL11Q9Y3B7 192 aaKnown RBP19.21■□□□□ 0.67
CDT1-202ENST00000562747 PTPDC1A2A3K4 754 aa19.2■□□□□ 0.66
CDT1-202ENST00000562747 SOWAHBA6NEL2 793 aa19.2■□□□□ 0.66
CDT1-202ENST00000562747 ASB14A6NK59 587 aa19.2■□□□□ 0.66
CDT1-202ENST00000562747 CYTH3O43739 400 aa19.2■□□□□ 0.66
CDT1-202ENST00000562747 SLC35G1Q2M3R5 365 aa19.2■□□□□ 0.66
CDT1-202ENST00000562747 TCEANC2Q96MN5 208 aa19.2■□□□□ 0.66
CDT1-202ENST00000562747 TOX2Q96NM4 488 aa19.2■□□□□ 0.66
CDT1-202ENST00000562747 SPZ1Q9BXG8 430 aa19.2■□□□□ 0.66
CDT1-202ENST00000562747 ADD3Q9UEY8 706 aaKnown RBP19.2■□□□□ 0.66
CDT1-202ENST00000562747 TBX21Q9UL17 535 aa19.2■□□□□ 0.66
CDT1-202ENST00000562747 FAM184BQ9ULE4 1060 aa19.2■□□□□ 0.66
CDT1-202ENST00000562747 TMEM265A0A087WTH1 108 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms