RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 LSG1Q9H089 658 aaKnown RBP20.74■□□□□ 0.91
CMTM3-204ENST00000562357 JMJD4Q9H9V9 463 aa20.74■□□□□ 0.91
CMTM3-204ENST00000562357 CDC45O75419 566 aa20.73■□□□□ 0.91
CMTM3-204ENST00000562357 MCM5P33992 734 aa20.73■□□□□ 0.91
CMTM3-204ENST00000562357 MDM2Q00987 491 aaPredicted RBP20.73■□□□□ 0.91
CMTM3-204ENST00000562357 GRM4Q14833 912 aa20.73■□□□□ 0.91
CMTM3-204ENST00000562357 MB21D2Q8IYB1 491 aaPredicted RBP20.73■□□□□ 0.91
CMTM3-204ENST00000562357 STAG2Q8N3U4 1231 aa20.73■□□□□ 0.91
CMTM3-204ENST00000562357 MTA3Q9BTC8 594 aa20.73■□□□□ 0.91
CMTM3-204ENST00000562357 TAF6LQ9Y6J9 622 aa20.73■□□□□ 0.91
CMTM3-204ENST00000562357 MCM3APO60318 1980 aa20.72■□□□□ 0.91
CMTM3-204ENST00000562357 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.72■□□□□ 0.91
CMTM3-204ENST00000562357 PALM3A6NDB9 673 aaPredicted RBP20.72■□□□□ 0.91
CMTM3-204ENST00000562357 MYADML2A6NDP7 307 aa20.72■□□□□ 0.91
CMTM3-204ENST00000562357 SLC27A2O14975 620 aa20.72■□□□□ 0.91
CMTM3-204ENST00000562357 ADCY6O43306 1168 aa20.72■□□□□ 0.91
CMTM3-204ENST00000562357 PQBP1O60828 265 aaKnown RBP20.72■□□□□ 0.91
CMTM3-204ENST00000562357 ASGR1P07306 291 aa20.72■□□□□ 0.91
CMTM3-204ENST00000562357 TLE2Q04725 743 aa20.72■□□□□ 0.91
CMTM3-204ENST00000562357 NFXL1Q6ZNB6 911 aa20.72■□□□□ 0.91
CMTM3-204ENST00000562357 SKAP1Q86WV1 359 aa20.72■□□□□ 0.91
CMTM3-204ENST00000562357 MAD2L2Q9UI95 211 aa20.72■□□□□ 0.91
CMTM3-204ENST00000562357 Q9Y3F1 56 aa20.72■□□□□ 0.91
CMTM3-204ENST00000562357 DDX49Q9Y6V7 483 aaKnown RBP20.72■□□□□ 0.91
CMTM3-204ENST00000562357 ELP1O95163 1332 aa20.72■□□□□ 0.91
CMTM3-204ENST00000562357 MROH7Q68CQ1 1323 aa20.72■□□□□ 0.91
CMTM3-204ENST00000562357 DCDC2CA8MYV0 355 aa20.71■□□□□ 0.91
CMTM3-204ENST00000562357 ZBTB5O15062 677 aa20.71■□□□□ 0.91
CMTM3-204ENST00000562357 DYNC1LI2O43237 492 aaPredicted RBP20.71■□□□□ 0.91
CMTM3-204ENST00000562357 PRC1O43663 620 aa20.71■□□□□ 0.91
CMTM3-204ENST00000562357 CLTBP09497 229 aa20.71■□□□□ 0.91
CMTM3-204ENST00000562357 SMPD1P17405 629 aa20.71■□□□□ 0.91
CMTM3-204ENST00000562357 FSCN1Q16658 493 aaKnown RBP20.71■□□□□ 0.91
CMTM3-204ENST00000562357 CREB3L3Q68CJ9 461 aa20.71■□□□□ 0.91
CMTM3-204ENST00000562357 TAPT1Q6NXT6 567 aa20.71■□□□□ 0.91
CMTM3-204ENST00000562357 HOMER1Q86YM7 354 aa20.71■□□□□ 0.91
CMTM3-204ENST00000562357 TDHQ8IZJ6 230 aa20.71■□□□□ 0.91
CMTM3-204ENST00000562357 TMTC2Q8N394 836 aa20.71■□□□□ 0.91
CMTM3-204ENST00000562357 CTCFLQ8NI51 663 aaPredicted RBP20.71■□□□□ 0.91
CMTM3-204ENST00000562357 TMEM87BQ96K49 555 aa20.71■□□□□ 0.91
CMTM3-204ENST00000562357 PDGFCQ9NRA1 345 aa20.71■□□□□ 0.91
CMTM3-204ENST00000562357 GNEQ9Y223 722 aaKnown RBP20.71■□□□□ 0.91
CMTM3-204ENST00000562357 A0A0U1RQG5 324 aaPredicted RBP20.7■□□□□ 0.9
CMTM3-204ENST00000562357 CCDC69A6NI79 296 aa20.7■□□□□ 0.9
CMTM3-204ENST00000562357 CABYRO75952 493 aa20.7■□□□□ 0.9
CMTM3-204ENST00000562357 DDAH1O94760 285 aa20.7■□□□□ 0.9
CMTM3-204ENST00000562357 KIF5BP33176 963 aa20.7■□□□□ 0.9
CMTM3-204ENST00000562357 NKX3-2P78367 333 aa20.7■□□□□ 0.9
CMTM3-204ENST00000562357 BRDTQ58F21 947 aaPredicted RBP20.7■□□□□ 0.9
CMTM3-204ENST00000562357 CCSAPQ6IQ19 270 aaPredicted RBP20.7■□□□□ 0.9
CMTM3-204ENST00000562357 NSUN6Q8TEA1 469 aaKnown RBP20.7■□□□□ 0.9
CMTM3-204ENST00000562357 WDR11Q9BZH6 1224 aa20.7■□□□□ 0.9
CMTM3-204ENST00000562357 PDLIM7Q9NR12 457 aa20.7■□□□□ 0.9
CMTM3-204ENST00000562357 CFBP00751 764 aa20.69■□□□□ 0.9
CMTM3-204ENST00000562357 ANTXR2P58335 489 aa20.69■□□□□ 0.9
CMTM3-204ENST00000562357 BEX3Q00994 111 aa20.69■□□□□ 0.9
CMTM3-204ENST00000562357 TROAPQ12815 778 aa20.69■□□□□ 0.9
CMTM3-204ENST00000562357 PPP2R5BQ15173 497 aa20.69■□□□□ 0.9
CMTM3-204ENST00000562357 DUSP28Q4G0W2 176 aa20.69■□□□□ 0.9
CMTM3-204ENST00000562357 IGDCC4Q8TDY8 1250 aa20.69■□□□□ 0.9
CMTM3-204ENST00000562357 SCFD2Q8WU76 684 aa20.69■□□□□ 0.9
CMTM3-204ENST00000562357 TOX2Q96NM4 488 aa20.69■□□□□ 0.9
CMTM3-204ENST00000562357 PCDHA1Q9Y5I3 950 aa20.69■□□□□ 0.9
CMTM3-204ENST00000562357 NKRFO15226 690 aaKnown RBP eCLIP20.68■□□□□ 0.92e-6■■■□□ 16.7
CMTM3-204ENST00000562357 EDNRBP24530 442 aa20.68■□□□□ 0.9
CMTM3-204ENST00000562357 NECTIN1Q15223 517 aa20.68■□□□□ 0.9
CMTM3-204ENST00000562357 ANKRD33Q7Z3H0 272 aa20.68■□□□□ 0.9
CMTM3-204ENST00000562357 ZNF654Q8IZM8 581 aa20.68■□□□□ 0.9
CMTM3-204ENST00000562357 SYTL5Q8TDW5 730 aaPredicted RBP20.68■□□□□ 0.9
CMTM3-204ENST00000562357 MTMR8Q96EF0 704 aa20.68■□□□□ 0.9
CMTM3-204ENST00000562357 RMDN3Q96TC7 470 aa20.68■□□□□ 0.9
CMTM3-204ENST00000562357 MAP3K14Q99558 947 aa20.68■□□□□ 0.9
CMTM3-204ENST00000562357 LY9Q9HBG7 655 aa20.68■□□□□ 0.9
CMTM3-204ENST00000562357 SENP2Q9HC62 589 aa20.68■□□□□ 0.9
CMTM3-204ENST00000562357 TMEM39AQ9NV64 488 aa20.68■□□□□ 0.9
CMTM3-204ENST00000562357 TLR3O15455 904 aaKnown RBP20.67■□□□□ 0.9
CMTM3-204ENST00000562357 CALM1P0DP23 149 aa20.67■□□□□ 0.9
CMTM3-204ENST00000562357 CALM2P0DP24 149 aa20.67■□□□□ 0.9
CMTM3-204ENST00000562357 CALM3P0DP25 149 aa20.67■□□□□ 0.9
CMTM3-204ENST00000562357 RAG1P15918 1043 aa20.67■□□□□ 0.9
CMTM3-204ENST00000562357 GNAQP50148 359 aa20.67■□□□□ 0.9
CMTM3-204ENST00000562357 CPT1AP50416 773 aa20.67■□□□□ 0.9
CMTM3-204ENST00000562357 IRX5P78411 483 aaPredicted RBP20.67■□□□□ 0.9
CMTM3-204ENST00000562357 TTLL4Q14679 1199 aa20.67■□□□□ 0.9
CMTM3-204ENST00000562357 ARHGEF16Q5VV41 709 aa20.67■□□□□ 0.9
CMTM3-204ENST00000562357 CXCL17Q6UXB2 119 aa20.67■□□□□ 0.9
CMTM3-204ENST00000562357 IWS1Q96ST2 819 aa20.67■□□□□ 0.9
CMTM3-204ENST00000562357 LZTS2Q9BRK4 669 aa20.67■□□□□ 0.9
CMTM3-204ENST00000562357 RIOX1Q9H6W3 641 aa20.67■□□□□ 0.9
CMTM3-204ENST00000562357 MAP3K20Q9NYL2 800 aaKnown RBP20.67■□□□□ 0.9
CMTM3-204ENST00000562357 LRRC37A2A6NM11 1700 aa20.67■□□□□ 0.9
CMTM3-204ENST00000562357 RBM47A0AV96 593 aaKnown RBP20.66■□□□□ 0.9
CMTM3-204ENST00000562357 ARVCFO00192 962 aa20.66■□□□□ 0.9
CMTM3-204ENST00000562357 CTAGE5O15320 804 aa20.66■□□□□ 0.9
CMTM3-204ENST00000562357 STXBP2Q15833 593 aa20.66■□□□□ 0.9
CMTM3-204ENST00000562357 SAMD3Q8N6K7 520 aa20.66■□□□□ 0.9
CMTM3-204ENST00000562357 OR6J1Q8NGC5 347 aa20.66■□□□□ 0.9
CMTM3-204ENST00000562357 PIGSQ96S52 555 aa20.66■□□□□ 0.9
CMTM3-204ENST00000562357 SEZ6LQ9BYH1 1024 aa20.66■□□□□ 0.9
CMTM3-204ENST00000562357 GPHNQ9NQX3 736 aaPredicted RBP20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms