RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 MOXD1Q6UVY6 613 aa16.23■□□□□ 0.19
COMMD4-205ENST00000562310 MCF2L2Q86YR7 1114 aa16.23■□□□□ 0.19
COMMD4-205ENST00000562310 FMR1NBQ8N0W7 255 aaPredicted RBP16.23■□□□□ 0.19
COMMD4-205ENST00000562310 OTUD5Q96G74 571 aa16.23■□□□□ 0.19
COMMD4-205ENST00000562310 CLMNQ96JQ2 1002 aa16.23■□□□□ 0.19
COMMD4-205ENST00000562310 MAF1Q9H063 256 aa16.23■□□□□ 0.19
COMMD4-205ENST00000562310 HOXC10Q9NYD6 342 aa16.23■□□□□ 0.19
COMMD4-205ENST00000562310 MAP3K20Q9NYL2 800 aaKnown RBP16.23■□□□□ 0.19
COMMD4-205ENST00000562310 HPSEQ9Y251 543 aa16.23■□□□□ 0.19
COMMD4-205ENST00000562310 SMCHD1A6NHR9 2005 aa16.23■□□□□ 0.19
COMMD4-205ENST00000562310 A0A1B0GVL5 298 aa16.22■□□□□ 0.19
COMMD4-205ENST00000562310 OPLAHO14841 1288 aa16.22■□□□□ 0.19
COMMD4-205ENST00000562310 OR52Z1P0C646 297 aa16.22■□□□□ 0.19
COMMD4-205ENST00000562310 LONP1P36776 959 aaKnown RBP16.22■□□□□ 0.19
COMMD4-205ENST00000562310 USP11P51784 963 aa16.22■□□□□ 0.19
COMMD4-205ENST00000562310 NDUFA8P51970 172 aa16.22■□□□□ 0.19
COMMD4-205ENST00000562310 GHRHRQ02643 423 aa16.22■□□□□ 0.19
COMMD4-205ENST00000562310 SNW1Q13573 536 aaKnown RBP16.22■□□□□ 0.19
COMMD4-205ENST00000562310 USP17L6PQ6QN14 398 aa16.22■□□□□ 0.19
COMMD4-205ENST00000562310 C4orf32Q8N8J7 132 aa16.22■□□□□ 0.19
COMMD4-205ENST00000562310 ATG4CQ96DT6 458 aa16.22■□□□□ 0.19
COMMD4-205ENST00000562310 TIGD1Q96MW7 591 aa16.22■□□□□ 0.19
COMMD4-205ENST00000562310 PYM1Q9BRP8 204 aaKnown RBP16.22■□□□□ 0.19
COMMD4-205ENST00000562310 TNMDQ9H2S6 317 aa16.22■□□□□ 0.19
COMMD4-205ENST00000562310 ADAMTS5Q9UNA0 930 aa16.22■□□□□ 0.19
COMMD4-205ENST00000562310 SYCE3A1L190 88 aa16.21■□□□□ 0.19
COMMD4-205ENST00000562310 TRAF5O00463 557 aa16.21■□□□□ 0.19
COMMD4-205ENST00000562310 ATP2A1O14983 1001 aa16.21■□□□□ 0.19
COMMD4-205ENST00000562310 HOXA7P31268 230 aaPredicted RBP16.21■□□□□ 0.19
COMMD4-205ENST00000562310 SREBF1P36956 1147 aa16.21■□□□□ 0.19
COMMD4-205ENST00000562310 SYKP43405 635 aa16.21■□□□□ 0.19
COMMD4-205ENST00000562310 PABPC4Q13310 644 aaKnown RBP eCLIP16.21■□□□□ 0.19
COMMD4-205ENST00000562310 TKFCQ3LXA3 575 aa16.21■□□□□ 0.19
COMMD4-205ENST00000562310 LRSAM1Q6UWE0 723 aa16.21■□□□□ 0.19
COMMD4-205ENST00000562310 DTHD1Q6ZMT9 781 aa16.21■□□□□ 0.19
COMMD4-205ENST00000562310 MOB2Q70IA6 237 aa16.21■□□□□ 0.19
COMMD4-205ENST00000562310 FASTKD5Q7L8L6 764 aaKnown RBP16.21■□□□□ 0.19
COMMD4-205ENST00000562310 MB21D1Q8N884 522 aa16.21■□□□□ 0.19
COMMD4-205ENST00000562310 OPTNQ96CV9 577 aa16.21■□□□□ 0.19
COMMD4-205ENST00000562310 CLIC6Q96NY7 704 aa16.21■□□□□ 0.19
COMMD4-205ENST00000562310 CSRNP2Q9H175 543 aa16.21■□□□□ 0.19
COMMD4-205ENST00000562310 GBA2Q9HCG7 927 aaPredicted RBP16.21■□□□□ 0.19
COMMD4-205ENST00000562310 RABGAP1Q9Y3P9 1069 aa16.21■□□□□ 0.19
COMMD4-205ENST00000562310 VWA3AA6NCI4 1184 aa16.2■□□□□ 0.18
COMMD4-205ENST00000562310 IRF6O14896 467 aa16.2■□□□□ 0.18
COMMD4-205ENST00000562310 TXLNAP40222 546 aa16.2■□□□□ 0.18
COMMD4-205ENST00000562310 HSD17B4P51659 736 aa16.2■□□□□ 0.18
COMMD4-205ENST00000562310 GADL1Q6ZQY3 521 aa16.2■□□□□ 0.18
COMMD4-205ENST00000562310 RBM43Q6ZSC3 357 aaKnown RBP16.2■□□□□ 0.18
COMMD4-205ENST00000562310 C2orf69Q8N8R5 385 aa16.2■□□□□ 0.18
COMMD4-205ENST00000562310 REPS2Q8NFH8 660 aa16.2■□□□□ 0.18
COMMD4-205ENST00000562310 CNKSR2Q8WXI2 1034 aa16.2■□□□□ 0.18
COMMD4-205ENST00000562310 SLC10A4Q96EP9 437 aa16.2■□□□□ 0.18
COMMD4-205ENST00000562310 AGBL1Q96MI9 1066 aa16.2■□□□□ 0.18
COMMD4-205ENST00000562310 ZNF408Q9H9D4 720 aa16.2■□□□□ 0.18
COMMD4-205ENST00000562310 RAVER2Q9HCJ3 691 aaKnown RBP16.2■□□□□ 0.18
COMMD4-205ENST00000562310 NMRK2Q9NPI5 230 aa16.2■□□□□ 0.18
COMMD4-205ENST00000562310 KCNH3Q9ULD8 1083 aa16.2■□□□□ 0.18
COMMD4-205ENST00000562310 AGTPBP1Q9UPW5 1226 aa16.2■□□□□ 0.18
COMMD4-205ENST00000562310 CYP3A7-CYP3A51PA0A087WV96 503 aa16.19■□□□□ 0.18
COMMD4-205ENST00000562310 SPDYE16A6NNV3 312 aaPredicted RBP16.19■□□□□ 0.18
COMMD4-205ENST00000562310 ZNF202O95125 648 aa16.19■□□□□ 0.18
COMMD4-205ENST00000562310 CFBP00751 764 aa16.19■□□□□ 0.18
COMMD4-205ENST00000562310 ALAS1P13196 640 aa16.19■□□□□ 0.18
COMMD4-205ENST00000562310 CYP3A7P24462 503 aa16.19■□□□□ 0.18
COMMD4-205ENST00000562310 ARHGAP4P98171 946 aa16.19■□□□□ 0.18
COMMD4-205ENST00000562310 SNAPC2Q13487 334 aa16.19■□□□□ 0.18
COMMD4-205ENST00000562310 CALCRLQ16602 461 aa16.19■□□□□ 0.18
COMMD4-205ENST00000562310 TMEM266Q2M3C6 531 aa16.19■□□□□ 0.18
COMMD4-205ENST00000562310 CHADLQ6NUI6 762 aa16.19■□□□□ 0.18
COMMD4-205ENST00000562310 CPXCR1Q8N123 301 aa16.19■□□□□ 0.18
COMMD4-205ENST00000562310 CRYGNQ8WXF5 182 aa16.19■□□□□ 0.18
COMMD4-205ENST00000562310 CCDC34Q96HJ3 373 aa16.19■□□□□ 0.18
COMMD4-205ENST00000562310 AK8Q96MA6 479 aa16.19■□□□□ 0.18
COMMD4-205ENST00000562310 MBOAT7Q96N66 472 aa16.19■□□□□ 0.18
COMMD4-205ENST00000562310 TEX13BQ9BXU2 312 aa16.19■□□□□ 0.18
COMMD4-205ENST00000562310 DDX25Q9UHL0 483 aaKnown RBP16.19■□□□□ 0.18
COMMD4-205ENST00000562310 USP25Q9UHP3 1055 aa16.19■□□□□ 0.18
COMMD4-205ENST00000562310 MRVI1Q9Y6F6 885 aa16.19■□□□□ 0.18
COMMD4-205ENST00000562310 GOLGA6L3A6NEY3 463 aa16.18■□□□□ 0.18
COMMD4-205ENST00000562310 TDP2O95551 362 aa16.18■□□□□ 0.18
COMMD4-205ENST00000562310 CYP3A4P08684 503 aa16.18■□□□□ 0.18
COMMD4-205ENST00000562310 TAL1P17542 331 aaPredicted RBP16.18■□□□□ 0.18
COMMD4-205ENST00000562310 HOXA13P31271 388 aaPredicted RBP16.18■□□□□ 0.18
COMMD4-205ENST00000562310 IRX3P78415 501 aaPredicted RBP16.18■□□□□ 0.18
COMMD4-205ENST00000562310 GRIN1Q05586 938 aa16.18■□□□□ 0.18
COMMD4-205ENST00000562310 TREML2Q5T2D2 321 aa16.18■□□□□ 0.18
COMMD4-205ENST00000562310 LBX2Q6XYB7 198 aa16.18■□□□□ 0.18
COMMD4-205ENST00000562310 ELOA2Q8IYF1 753 aaPredicted RBP16.18■□□□□ 0.18
COMMD4-205ENST00000562310 CLEC4DQ8WXI8 215 aa16.18■□□□□ 0.18
COMMD4-205ENST00000562310 RAB34Q9BZG1 259 aa16.18■□□□□ 0.18
COMMD4-205ENST00000562310 TMEM60Q9H2L4 133 aa16.18■□□□□ 0.18
COMMD4-205ENST00000562310 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.18■□□□□ 0.18
COMMD4-205ENST00000562310 HOOK1Q9UJC3 728 aaKnown RBP16.18■□□□□ 0.18
COMMD4-205ENST00000562310 CELF2O95319 508 aaKnown RBP16.17■□□□□ 0.18
COMMD4-205ENST00000562310 CIITAP33076 1130 aa16.17■□□□□ 0.18
COMMD4-205ENST00000562310 SNRNP48Q6IEG0 339 aaKnown RBP16.17■□□□□ 0.18
COMMD4-205ENST00000562310 KANK3Q6NY19 840 aa16.17■□□□□ 0.18
COMMD4-205ENST00000562310 POTEDQ86YR6 584 aa16.17■□□□□ 0.18
COMMD4-205ENST00000562310 GTF3C2Q8WUA4 911 aaPredicted RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms