RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 RAPGEF6Q8TEU7 1601 aa12.29□□□□□ -0.44
RPAP1-204ENST00000562303 SLC7A3Q8WY07 619 aa12.29□□□□□ -0.44
RPAP1-204ENST00000562303 FAM149B1Q96BN6 582 aa12.29□□□□□ -0.44
RPAP1-204ENST00000562303 UBN1Q9NPG3 1134 aa12.29□□□□□ -0.44
RPAP1-204ENST00000562303 CPSF3Q9UKF6 684 aaKnown RBP12.29□□□□□ -0.44
RPAP1-204ENST00000562303 ABT1Q9ULW3 272 aaKnown RBP12.29□□□□□ -0.44
RPAP1-204ENST00000562303 HMGB1P1B2RPK0 211 aaPredicted RBP12.28□□□□□ -0.44
RPAP1-204ENST00000562303 MFAP3P55082 362 aa12.28□□□□□ -0.44
RPAP1-204ENST00000562303 YWHAGP61981 247 aaKnown RBP eCLIP12.28□□□□□ -0.44
RPAP1-204ENST00000562303 PPP2R5EQ16537 467 aa12.28□□□□□ -0.44
RPAP1-204ENST00000562303 FAM26FQ5R3K3 315 aa12.28□□□□□ -0.44
RPAP1-204ENST00000562303 ATP6V1E2Q96A05 226 aa12.28□□□□□ -0.44
RPAP1-204ENST00000562303 ZNF577Q9BSK1 485 aa12.28□□□□□ -0.44
RPAP1-204ENST00000562303 XPO4Q9C0E2 1151 aaKnown RBP12.28□□□□□ -0.44
RPAP1-204ENST00000562303 KRT10P13645 584 aa12.28□□□□□ -0.44
RPAP1-204ENST00000562303 MMEL1Q495T6 779 aa12.28□□□□□ -0.44
RPAP1-204ENST00000562303 RAPH1Q70E73 1250 aa12.28□□□□□ -0.44
RPAP1-204ENST00000562303 RAB44Q7Z6P3 723 aaPredicted RBP12.28□□□□□ -0.44
RPAP1-204ENST00000562303 PSPC1Q8WXF1 523 aaKnown RBP12.28□□□□□ -0.44
RPAP1-204ENST00000562303 KLHL14Q9P2G3 628 aa12.28□□□□□ -0.44
RPAP1-204ENST00000562303 XDHP47989 1333 aa12.28□□□□□ -0.44
RPAP1-204ENST00000562303 PHKG2P15735 406 aa12.28□□□□□ -0.44
RPAP1-204ENST00000562303 ADALQ6DHV7 355 aa12.28□□□□□ -0.44
RPAP1-204ENST00000562303 SDCCAG3Q96C92 435 aa12.28□□□□□ -0.44
RPAP1-204ENST00000562303 GPC4O75487 556 aa12.28□□□□□ -0.44
RPAP1-204ENST00000562303 BPIFB4P59827 614 aa12.28□□□□□ -0.44
RPAP1-204ENST00000562303 IQCB1Q15051 598 aa12.28□□□□□ -0.44
RPAP1-204ENST00000562303 HOMER3Q9NSC5 361 aa12.28□□□□□ -0.44
RPAP1-204ENST00000562303 KIAA1024Q9UPX6 916 aa12.28□□□□□ -0.44
RPAP1-204ENST00000562303 WDR17Q8IZU2 1322 aa12.28□□□□□ -0.44
RPAP1-204ENST00000562303 CLNS1AP54105 237 aaKnown RBP12.27□□□□□ -0.44
RPAP1-204ENST00000562303 IRX4P78413 519 aa12.27□□□□□ -0.44
RPAP1-204ENST00000562303 IL1RL1Q01638 556 aa12.27□□□□□ -0.44
RPAP1-204ENST00000562303 KSR1Q8IVT5 923 aa12.27□□□□□ -0.44
RPAP1-204ENST00000562303 NT5C1BQ96P26 610 aa12.27□□□□□ -0.44
RPAP1-204ENST00000562303 NLRP7Q8WX94 980 aa12.27□□□□□ -0.44
RPAP1-204ENST00000562303 RPGRIP1Q96KN7 1286 aa12.27□□□□□ -0.44
RPAP1-204ENST00000562303 TRPC5Q9UL62 973 aaPredicted RBP12.27□□□□□ -0.44
RPAP1-204ENST00000562303 COL17A1Q9UMD9 1497 aaPredicted RBP12.27□□□□□ -0.45
RPAP1-204ENST00000562303 SEMA3EO15041 775 aa12.27□□□□□ -0.45
RPAP1-204ENST00000562303 GTPBP6O43824 516 aaPredicted RBP12.27□□□□□ -0.45
RPAP1-204ENST00000562303 RPN1P04843 607 aaKnown RBP12.27□□□□□ -0.45
RPAP1-204ENST00000562303 PCCAP05165 728 aaPredicted RBP12.27□□□□□ -0.45
RPAP1-204ENST00000562303 H2AFZP0C0S5 128 aa12.27□□□□□ -0.45
RPAP1-204ENST00000562303 MKRN3Q13064 507 aaKnown RBP12.27□□□□□ -0.45
RPAP1-204ENST00000562303 PDE1CQ14123 709 aaPredicted RBP12.27□□□□□ -0.45
RPAP1-204ENST00000562303 ME3Q16798 604 aa12.27□□□□□ -0.45
RPAP1-204ENST00000562303 H2AFVQ71UI9 128 aa12.27□□□□□ -0.45
RPAP1-204ENST00000562303 BBOF1Q8ND07 529 aa12.27□□□□□ -0.45
RPAP1-204ENST00000562303 SLC17A8Q8NDX2 589 aa12.27□□□□□ -0.45
RPAP1-204ENST00000562303 CCDC17Q96LX7 622 aa12.27□□□□□ -0.45
RPAP1-204ENST00000562303 SLC38A10Q9HBR0 1119 aa12.27□□□□□ -0.45
RPAP1-204ENST00000562303 PDE1BQ01064 536 aa12.27□□□□□ -0.45
RPAP1-204ENST00000562303 UHMK1Q8TAS1 419 aaKnown RBP12.27□□□□□ -0.45
RPAP1-204ENST00000562303 PLEKHG3A1L390 1219 aa12.27□□□□□ -0.45
RPAP1-204ENST00000562303 TRIM37O94972 964 aa12.27□□□□□ -0.45
RPAP1-204ENST00000562303 ADD1P35611 737 aaKnown RBP12.27□□□□□ -0.45
RPAP1-204ENST00000562303 TBC1D10BQ4KMP7 808 aaPredicted RBP12.26□□□□□ -0.45
RPAP1-204ENST00000562303 GANCQ8TET4 914 aa12.26□□□□□ -0.45
RPAP1-204ENST00000562303 CCND2P30279 289 aa12.26□□□□□ -0.45
RPAP1-204ENST00000562303 COG7P83436 770 aa12.26□□□□□ -0.45
RPAP1-204ENST00000562303 CDR2Q01850 454 aa12.26□□□□□ -0.45
RPAP1-204ENST00000562303 ASPHQ12797 758 aa12.26□□□□□ -0.45
RPAP1-204ENST00000562303 EXOC3L4Q17RC7 722 aa12.26□□□□□ -0.45
RPAP1-204ENST00000562303 LRRC24Q50LG9 513 aa12.26□□□□□ -0.45
RPAP1-204ENST00000562303 C17orf53Q8N3J3 647 aaPredicted RBP12.26□□□□□ -0.45
RPAP1-204ENST00000562303 CCNYQ8ND76 341 aa12.26□□□□□ -0.45
RPAP1-204ENST00000562303 CACTINQ8WUQ7 758 aaKnown RBP12.26□□□□□ -0.45
RPAP1-204ENST00000562303 IFT122Q9HBG6 1241 aa12.26□□□□□ -0.45
RPAP1-204ENST00000562303 KMT5AQ9NQR1 393 aa12.26□□□□□ -0.45
RPAP1-204ENST00000562303 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.26□□□□□ -0.45
RPAP1-204ENST00000562303 FAM8A1Q9UBU6 413 aa12.26□□□□□ -0.45
RPAP1-204ENST00000562303 MED23Q9ULK4 1368 aa12.26□□□□□ -0.45
RPAP1-204ENST00000562303 BAG2O95816 211 aa12.26□□□□□ -0.45
RPAP1-204ENST00000562303 STMN1P16949 149 aa12.26□□□□□ -0.45
RPAP1-204ENST00000562303 KCTD1Q719H9 257 aa12.26□□□□□ -0.45
RPAP1-204ENST00000562303 PI4K2BQ8TCG2 481 aa12.26□□□□□ -0.45
RPAP1-204ENST00000562303 TPCN1Q9ULQ1 816 aa12.26□□□□□ -0.45
RPAP1-204ENST00000562303 ITSN2Q9NZM3 1697 aa12.26□□□□□ -0.45
RPAP1-204ENST00000562303 LOC102724428A0A0B4J2F2 783 aa12.26□□□□□ -0.45
RPAP1-204ENST00000562303 SGK1O00141 431 aa12.26□□□□□ -0.45
RPAP1-204ENST00000562303 SMIM24O75264 130 aa12.26□□□□□ -0.45
RPAP1-204ENST00000562303 CRKLP46109 303 aaKnown RBP12.26□□□□□ -0.45
RPAP1-204ENST00000562303 SIK1P57059 783 aa12.26□□□□□ -0.45
RPAP1-204ENST00000562303 WHAMMP3Q1A5X7 153 aa12.26□□□□□ -0.45
RPAP1-204ENST00000562303 PDZD8Q8NEN9 1154 aa12.26□□□□□ -0.45
RPAP1-204ENST00000562303 MICAL1Q8TDZ2 1067 aa12.26□□□□□ -0.45
RPAP1-204ENST00000562303 TSC1Q92574 1164 aa12.26□□□□□ -0.45
RPAP1-204ENST00000562303 PGBD1Q96JS3 809 aa12.26□□□□□ -0.45
RPAP1-204ENST00000562303 GCNAQ96QF7 691 aa12.26□□□□□ -0.45
RPAP1-204ENST00000562303 TTC1Q99614 292 aa12.26□□□□□ -0.45
RPAP1-204ENST00000562303 DBNDD1Q9H9R9 158 aa12.26□□□□□ -0.45
RPAP1-204ENST00000562303 ATP8B3O60423 1300 aa12.26□□□□□ -0.45
RPAP1-204ENST00000562303 GDF11O95390 407 aa12.26□□□□□ -0.45
RPAP1-204ENST00000562303 HSPD1P10809 573 aaKnown RBP12.26□□□□□ -0.45
RPAP1-204ENST00000562303 LRRC43Q8N309 656 aa12.26□□□□□ -0.45
RPAP1-204ENST00000562303 LRGUKQ96M69 825 aa12.26□□□□□ -0.45
RPAP1-204ENST00000562303 TESK2Q96S53 571 aa12.26□□□□□ -0.45
RPAP1-204ENST00000562303 KIAA1468Q9P260 1216 aa12.26□□□□□ -0.45
RPAP1-204ENST00000562303 A0A0D9SFI3 127 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms