RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 KRT31Q15323 416 aa11.02□□□□□ -0.64
SMG1-205ENST00000561947 CDC37Q16543 378 aaPredicted RBP11.02□□□□□ -0.64
SMG1-205ENST00000561947 RBM26Q5T8P6 1007 aaKnown RBP11.02□□□□□ -0.64
SMG1-205ENST00000561947 GMCL1Q96IK5 515 aa11.02□□□□□ -0.64
SMG1-205ENST00000561947 BAG1Q99933 345 aaPredicted RBP11.02□□□□□ -0.64
SMG1-205ENST00000561947 F5H6K3 240 aa11.02□□□□□ -0.65
SMG1-205ENST00000561947 H7C1D1 291 aa11.02□□□□□ -0.65
SMG1-205ENST00000561947 CTIFO43310 598 aaKnown RBP11.02□□□□□ -0.65
SMG1-205ENST00000561947 STX10O60499 249 aa11.02□□□□□ -0.65
SMG1-205ENST00000561947 GCFC2P16383 781 aaKnown RBP11.02□□□□□ -0.65
SMG1-205ENST00000561947 ADKP55263 362 aaKnown RBP11.02□□□□□ -0.65
SMG1-205ENST00000561947 KLRC3Q07444 240 aa11.02□□□□□ -0.65
SMG1-205ENST00000561947 GRB10Q13322 594 aa11.02□□□□□ -0.65
SMG1-205ENST00000561947 PDIA5Q14554 519 aa11.02□□□□□ -0.65
SMG1-205ENST00000561947 ANKRD20A12PQ8NF67 263 aa11.02□□□□□ -0.65
SMG1-205ENST00000561947 PNMA5Q96PV4 448 aa11.02□□□□□ -0.65
SMG1-205ENST00000561947 CSRNP1Q96S65 589 aa11.02□□□□□ -0.65
SMG1-205ENST00000561947 NAP1L4Q99733 375 aaKnown RBP11.02□□□□□ -0.65
SMG1-205ENST00000561947 TMOD2Q9NZR1 351 aa11.02□□□□□ -0.65
SMG1-205ENST00000561947 STK17AQ9UEE5 414 aa11.02□□□□□ -0.65
SMG1-205ENST00000561947 DDX25Q9UHL0 483 aaKnown RBP11.02□□□□□ -0.65
SMG1-205ENST00000561947 PCDHA1Q9Y5I3 950 aa11.02□□□□□ -0.65
SMG1-205ENST00000561947 COL4A5P29400 1685 aa11.02□□□□□ -0.65
SMG1-205ENST00000561947 ITIH6Q6UXX5 1313 aa11.02□□□□□ -0.65
SMG1-205ENST00000561947 KIF13BQ9NQT8 1826 aa11.02□□□□□ -0.65
SMG1-205ENST00000561947 SPDYE2BA6NHP3 402 aa11.02□□□□□ -0.65
SMG1-205ENST00000561947 KCNJ18B7U540 433 aa11.02□□□□□ -0.65
SMG1-205ENST00000561947 AKR1B15C9JRZ8 316 aaPredicted RBP11.02□□□□□ -0.65
SMG1-205ENST00000561947 PSMA7O14818 248 aa11.02□□□□□ -0.65
SMG1-205ENST00000561947 NDUFB10O96000 172 aa11.02□□□□□ -0.65
SMG1-205ENST00000561947 GH2P01242 217 aa11.02□□□□□ -0.65
SMG1-205ENST00000561947 TUBB4AP04350 444 aa11.02□□□□□ -0.65
SMG1-205ENST00000561947 SPDYE6P0CI01 402 aa11.02□□□□□ -0.65
SMG1-205ENST00000561947 COPB1P53618 953 aaKnown RBP11.02□□□□□ -0.65
SMG1-205ENST00000561947 ASIC1P78348 528 aa11.02□□□□□ -0.65
SMG1-205ENST00000561947 JAG1P78504 1218 aa11.02□□□□□ -0.65
SMG1-205ENST00000561947 RBM10P98175 930 aaKnown RBP11.02□□□□□ -0.65
SMG1-205ENST00000561947 KCNJ12Q14500 433 aa11.02□□□□□ -0.65
SMG1-205ENST00000561947 TCP11X2Q5H9J9 407 aa11.02□□□□□ -0.65
SMG1-205ENST00000561947 KIF18AQ8NI77 898 aa11.02□□□□□ -0.65
SMG1-205ENST00000561947 TSC1Q92574 1164 aa11.02□□□□□ -0.65
SMG1-205ENST00000561947 GTPBP4Q9BZE4 634 aaKnown RBP11.02□□□□□ -0.65
SMG1-205ENST00000561947 EXOC1Q9NV70 894 aa11.02□□□□□ -0.65
SMG1-205ENST00000561947 TRIM49BA6NDI0 452 aa11.01□□□□□ -0.65
SMG1-205ENST00000561947 VIL1P09327 827 aaKnown RBP11.01□□□□□ -0.65
SMG1-205ENST00000561947 CCT6AP40227 531 aaKnown RBP11.01□□□□□ -0.65
SMG1-205ENST00000561947 RRP1BQ14684 758 aaKnown RBP11.01□□□□□ -0.65
SMG1-205ENST00000561947 PPFIBP1Q86W92 1011 aa11.01□□□□□ -0.65
SMG1-205ENST00000561947 PANX2Q96RD6 677 aa11.01□□□□□ -0.65
SMG1-205ENST00000561947 GMLQ99445 158 aa11.01□□□□□ -0.65
SMG1-205ENST00000561947 BLOC1S4Q9NUP1 217 aa11.01□□□□□ -0.65
SMG1-205ENST00000561947 HERC5Q9UII4 1024 aaKnown RBP11.01□□□□□ -0.65
SMG1-205ENST00000561947 POTEMA6NI47 508 aa11.01□□□□□ -0.65
SMG1-205ENST00000561947 PSMD14O00487 310 aa11.01□□□□□ -0.65
SMG1-205ENST00000561947 RAD17O75943 681 aa11.01□□□□□ -0.65
SMG1-205ENST00000561947 PDE4DQ08499 809 aa11.01□□□□□ -0.65
SMG1-205ENST00000561947 SV2BQ7L1I2 683 aa11.01□□□□□ -0.65
SMG1-205ENST00000561947 LARGE2Q8N3Y3 721 aa11.01□□□□□ -0.65
SMG1-205ENST00000561947 DHTKD1Q96HY7 919 aaPredicted RBP11.01□□□□□ -0.65
SMG1-205ENST00000561947 CDK5RAP3Q96JB5 506 aa11.01□□□□□ -0.65
SMG1-205ENST00000561947 TAB2Q9NYJ8 693 aa11.01□□□□□ -0.65
SMG1-205ENST00000561947 HDAC9Q9UKV0 1011 aa11.01□□□□□ -0.65
SMG1-205ENST00000561947 SYNPO2Q9UMS6 1093 aa11.01□□□□□ -0.65
SMG1-205ENST00000561947 TCP10L2B9ZVM9 353 aa11□□□□□ -0.65
SMG1-205ENST00000561947 USP17L15C9J2P7 530 aa11□□□□□ -0.65
SMG1-205ENST00000561947 USP17L13C9JLJ4 530 aa11□□□□□ -0.65
SMG1-205ENST00000561947 USP17L11C9JVI0 530 aa11□□□□□ -0.65
SMG1-205ENST00000561947 USP17L18D6R9N7 530 aa11□□□□□ -0.65
SMG1-205ENST00000561947 USP17L22D6RA61 530 aa11□□□□□ -0.65
SMG1-205ENST00000561947 USP17L17D6RBQ6 530 aa11□□□□□ -0.65
SMG1-205ENST00000561947 USP17L19D6RCP7 530 aa11□□□□□ -0.65
SMG1-205ENST00000561947 USP17L20D6RJB6 530 aa11□□□□□ -0.65
SMG1-205ENST00000561947 N4BP3O15049 544 aa11□□□□□ -0.65
SMG1-205ENST00000561947 ZSCAN12O43309 604 aa11□□□□□ -0.65
SMG1-205ENST00000561947 DPEP1P16444 411 aa11□□□□□ -0.65
SMG1-205ENST00000561947 KCNA3P22001 575 aa11□□□□□ -0.65
SMG1-205ENST00000561947 PPP1R2P41236 205 aa11□□□□□ -0.65
SMG1-205ENST00000561947 PMS1P54277 932 aaKnown RBP11□□□□□ -0.65
SMG1-205ENST00000561947 RBL2Q08999 1139 aa11□□□□□ -0.65
SMG1-205ENST00000561947 USP17L24Q0WX57 530 aa11□□□□□ -0.65
SMG1-205ENST00000561947 TMEM119Q4V9L6 283 aa11□□□□□ -0.65
SMG1-205ENST00000561947 SYDE2Q5VT97 1194 aa11□□□□□ -0.65
SMG1-205ENST00000561947 KRT79Q5XKE5 535 aa11□□□□□ -0.65
SMG1-205ENST00000561947 USP17L6PQ6QN14 398 aa11□□□□□ -0.65
SMG1-205ENST00000561947 REXO1L1PQ8IX06 675 aa11□□□□□ -0.65
SMG1-205ENST00000561947 SNX29Q8TEQ0 813 aa11□□□□□ -0.65
SMG1-205ENST00000561947 HAS1Q92839 578 aa11□□□□□ -0.65
SMG1-205ENST00000561947 NUP88Q99567 741 aaPredicted RBP11□□□□□ -0.65
SMG1-205ENST00000561947 AMNQ9BXJ7 453 aa11□□□□□ -0.65
SMG1-205ENST00000561947 ANO3Q9BYT9 981 aa11□□□□□ -0.65
SMG1-205ENST00000561947 THAP9Q9H5L6 903 aa11□□□□□ -0.65
SMG1-205ENST00000561947 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11□□□□□ -0.65
SMG1-205ENST00000561947 ZNF277Q9NRM2 450 aaPredicted RBP11□□□□□ -0.65
SMG1-205ENST00000561947 ZNF70Q9UC06 446 aaPredicted RBP11□□□□□ -0.65
SMG1-205ENST00000561947 CLRN2A0PK11 232 aa11□□□□□ -0.65
SMG1-205ENST00000561947 BMP3P12645 472 aa11□□□□□ -0.65
SMG1-205ENST00000561947 BAG6P46379 1132 aa11□□□□□ -0.65
SMG1-205ENST00000561947 AP3B2Q13367 1082 aa11□□□□□ -0.65
SMG1-205ENST00000561947 MCM6Q14566 821 aa11□□□□□ -0.65
SMG1-205ENST00000561947 DLGAP5Q15398 846 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms