RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 SSPNQ14714 243 aa3.84□□□□□ -1.79
CHD9-204ENST00000561869 LARP1BQ659C4 914 aaKnown RBP3.84□□□□□ -1.79
CHD9-204ENST00000561869 MBLAC2Q68D91 279 aa3.84□□□□□ -1.79
CHD9-204ENST00000561869 GTF2IRD2BQ6EKJ0 949 aa3.84□□□□□ -1.79
CHD9-204ENST00000561869 GTF2IRD2Q86UP8 949 aa3.84□□□□□ -1.79
CHD9-204ENST00000561869 CPNE8Q86YQ8 564 aa3.84□□□□□ -1.79
CHD9-204ENST00000561869 JAMLQ86YT9 394 aa3.84□□□□□ -1.79
CHD9-204ENST00000561869 TRIM59Q8IWR1 403 aa3.84□□□□□ -1.79
CHD9-204ENST00000561869 C20orf173Q96LM9 149 aa3.84□□□□□ -1.79
CHD9-204ENST00000561869 MTA3Q9BTC8 594 aa3.84□□□□□ -1.79
CHD9-204ENST00000561869 NKX2-4Q9H2Z4 354 aa3.84□□□□□ -1.79
CHD9-204ENST00000561869 EPB41L4AQ9HCS5 686 aaPredicted RBP3.84□□□□□ -1.79
CHD9-204ENST00000561869 CYP26B1Q9NR63 512 aa3.84□□□□□ -1.79
CHD9-204ENST00000561869 RAPGEFL1Q9UHV5 662 aa3.84□□□□□ -1.79
CHD9-204ENST00000561869 HCFC2Q9Y5Z7 792 aa3.84□□□□□ -1.79
CHD9-204ENST00000561869 IRS2Q9Y4H2 1338 aa3.84□□□□□ -1.79
CHD9-204ENST00000561869 C7orf72A4D263 438 aa3.83□□□□□ -1.8
CHD9-204ENST00000561869 IRS4O14654 1257 aaPredicted RBP3.83□□□□□ -1.8
CHD9-204ENST00000561869 N4BP3O15049 544 aa3.83□□□□□ -1.8
CHD9-204ENST00000561869 SUSD5O60279 629 aa3.83□□□□□ -1.8
CHD9-204ENST00000561869 NUAK1O60285 661 aa3.83□□□□□ -1.8
CHD9-204ENST00000561869 GJB6O95452 261 aa3.83□□□□□ -1.8
CHD9-204ENST00000561869 CYBBP04839 570 aa3.83□□□□□ -1.8
CHD9-204ENST00000561869 ITGAVP06756 1048 aa3.83□□□□□ -1.8
CHD9-204ENST00000561869 THBDP07204 575 aa3.83□□□□□ -1.8
CHD9-204ENST00000561869 GLI4P10075 376 aa3.83□□□□□ -1.8
CHD9-204ENST00000561869 HOXA5P20719 270 aa3.83□□□□□ -1.8
CHD9-204ENST00000561869 FBLN1P23142 703 aa3.83□□□□□ -1.8
CHD9-204ENST00000561869 TACR1P25103 407 aa3.83□□□□□ -1.8
CHD9-204ENST00000561869 SCRN1Q12765 414 aa3.83□□□□□ -1.8
CHD9-204ENST00000561869 NR1I3Q14994 352 aa3.83□□□□□ -1.8
CHD9-204ENST00000561869 FXNQ16595 210 aa3.83□□□□□ -1.8
CHD9-204ENST00000561869 PLEKHN1Q494U1 663 aaPredicted RBP3.83□□□□□ -1.8
CHD9-204ENST00000561869 CIAPIN1Q6FI81 312 aa3.83□□□□□ -1.8
CHD9-204ENST00000561869 TMC6Q7Z403 805 aa3.83□□□□□ -1.8
CHD9-204ENST00000561869 LDHDQ86WU2 507 aa3.83□□□□□ -1.8
CHD9-204ENST00000561869 ZNF227Q86WZ6 799 aa3.83□□□□□ -1.8
CHD9-204ENST00000561869 IGDCC3Q8IVU1 814 aa3.83□□□□□ -1.8
CHD9-204ENST00000561869 TMEFF1Q8IYR6 380 aa3.83□□□□□ -1.8
CHD9-204ENST00000561869 CELF2-AS1Q8N7Q2 184 aa3.83□□□□□ -1.8
CHD9-204ENST00000561869 KREMEN2Q8NCW0 462 aa3.83□□□□□ -1.8
CHD9-204ENST00000561869 NPLOC4Q8TAT6 608 aa3.83□□□□□ -1.8
CHD9-204ENST00000561869 PANK1Q8TE04 598 aa3.83□□□□□ -1.8
CHD9-204ENST00000561869 FRS2Q8WU20 508 aa3.83□□□□□ -1.8
CHD9-204ENST00000561869 BTN2A2Q8WVV5 523 aa3.83□□□□□ -1.8
CHD9-204ENST00000561869 HNRNPLLQ8WVV9 542 aaKnown RBP3.83□□□□□ -1.8
CHD9-204ENST00000561869 DPF3Q92784 378 aa3.83□□□□□ -1.8
CHD9-204ENST00000561869 MMP19Q99542 508 aa3.83□□□□□ -1.8
CHD9-204ENST00000561869 IRF2BPLQ9H1B7 796 aa3.83□□□□□ -1.8
CHD9-204ENST00000561869 GPRC5CQ9NQ84 441 aa3.83□□□□□ -1.8
CHD9-204ENST00000561869 SIRT5Q9NXA8 310 aa3.83□□□□□ -1.8
CHD9-204ENST00000561869 CLEC1BQ9P126 229 aa3.83□□□□□ -1.8
CHD9-204ENST00000561869 PLA2G2DQ9UNK4 145 aa3.83□□□□□ -1.8
CHD9-204ENST00000561869 KCTD3Q9Y597 815 aa3.83□□□□□ -1.8
CHD9-204ENST00000561869 PCDHA5Q9Y5H7 936 aa3.83□□□□□ -1.8
CHD9-204ENST00000561869 NPHP3-ACAD11A0A0J9YXS1 232 aa3.82□□□□□ -1.8
CHD9-204ENST00000561869 A0A1W2PQ27 194 aa3.82□□□□□ -1.8
CHD9-204ENST00000561869 A0A1W2PQ64 194 aa3.82□□□□□ -1.8
CHD9-204ENST00000561869 A0A1W2PQC6 194 aa3.82□□□□□ -1.8
CHD9-204ENST00000561869 A0A1W2PQD8 194 aa3.82□□□□□ -1.8
CHD9-204ENST00000561869 NOP56O00567 594 aaKnown RBP3.82□□□□□ -1.8
CHD9-204ENST00000561869 DDAH1O94760 285 aa3.82□□□□□ -1.8
CHD9-204ENST00000561869 NAT2P11245 290 aa3.82□□□□□ -1.8
CHD9-204ENST00000561869 PLS3P13797 630 aa3.82□□□□□ -1.8
CHD9-204ENST00000561869 PAMP19021 973 aa3.82□□□□□ -1.8
CHD9-204ENST00000561869 SF1Q15637 639 aaKnown RBP3.82□□□□□ -1.8
CHD9-204ENST00000561869 INF2Q27J81 1249 aa3.82□□□□□ -1.8
CHD9-204ENST00000561869 BICRALQ6AI39 1079 aa3.82□□□□□ -1.8
CHD9-204ENST00000561869 POMZP3Q6PJE2 187 aa3.82□□□□□ -1.8
CHD9-204ENST00000561869 PAQR3Q6TCH7 311 aa3.82□□□□□ -1.8
CHD9-204ENST00000561869 ANKS3Q6ZW76 656 aa3.82□□□□□ -1.8
CHD9-204ENST00000561869 CRACR2BQ8N4Y2 399 aaPredicted RBP3.82□□□□□ -1.8
CHD9-204ENST00000561869 MZB1Q8WU39 189 aa3.82□□□□□ -1.8
CHD9-204ENST00000561869 SIGLEC10Q96LC7 697 aa3.82□□□□□ -1.8
CHD9-204ENST00000561869 RWDD3Q9Y3V2 267 aa3.82□□□□□ -1.8
CHD9-204ENST00000561869 ZC3H12DA2A288 527 aaKnown RBP3.81□□□□□ -1.8
CHD9-204ENST00000561869 SCG5P05408 212 aa3.81□□□□□ -1.8
CHD9-204ENST00000561869 IGFBP6P24592 240 aaPredicted RBP3.81□□□□□ -1.8
CHD9-204ENST00000561869 HOXC12P31275 282 aa3.81□□□□□ -1.8
CHD9-204ENST00000561869 NCKAP1LP55160 1127 aa3.81□□□□□ -1.8
CHD9-204ENST00000561869 CTSWP56202 376 aa3.81□□□□□ -1.8
CHD9-204ENST00000561869 PRR5P85299 388 aa3.81□□□□□ -1.8
CHD9-204ENST00000561869 TMEM62Q0P6H9 643 aa3.81□□□□□ -1.8
CHD9-204ENST00000561869 TESK1Q15569 626 aa3.81□□□□□ -1.8
CHD9-204ENST00000561869 SLC10A6Q3KNW5 377 aa3.81□□□□□ -1.8
CHD9-204ENST00000561869 SV2CQ496J9 727 aa3.81□□□□□ -1.8
CHD9-204ENST00000561869 OLFML2BQ68BL8 750 aa3.81□□□□□ -1.8
CHD9-204ENST00000561869 DENND5AQ6IQ26 1287 aa3.81□□□□□ -1.8
CHD9-204ENST00000561869 ZC3H14Q6PJT7 736 aaKnown RBP3.81□□□□□ -1.8
CHD9-204ENST00000561869 CCDC103Q8IW40 242 aa3.81□□□□□ -1.8
CHD9-204ENST00000561869 PLEKHO2Q8TD55 490 aa3.81□□□□□ -1.8
CHD9-204ENST00000561869 DACT3Q96B18 629 aaPredicted RBP3.81□□□□□ -1.8
CHD9-204ENST00000561869 ST7Q9NRC1 585 aa3.81□□□□□ -1.8
CHD9-204ENST00000561869 GULP1Q9UBP9 304 aa3.81□□□□□ -1.8
CHD9-204ENST00000561869 TMEFF2Q9UIK5 374 aaPredicted RBP3.81□□□□□ -1.8
CHD9-204ENST00000561869 CNOT6Q9ULM6 557 aaKnown RBP3.81□□□□□ -1.8
CHD9-204ENST00000561869 TRBV23OR9-2A0A075B6M9 112 aa3.8□□□□□ -1.8
CHD9-204ENST00000561869 A0A0G2JLL6 359 aaPredicted RBP3.8□□□□□ -1.8
CHD9-204ENST00000561869 F8W031 263 aaPredicted RBP3.8□□□□□ -1.8
CHD9-204ENST00000561869 PI3P19957 117 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms