RNA–Protein interactions for RNA: ENST00000561823.1

MAP1LC3B-202, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-202ENST00000561823 TLK2Q86UE8 772 aa20.24■□□□□ 0.83
MAP1LC3B-202ENST00000561823 DNERQ8NFT8 737 aa20.24■□□□□ 0.83
MAP1LC3B-202ENST00000561823 MAP4K1Q92918 833 aa20.24■□□□□ 0.83
MAP1LC3B-202ENST00000561823 VTI1AQ96AJ9 217 aa20.24■□□□□ 0.83
MAP1LC3B-202ENST00000561823 MAF1Q9H063 256 aa20.24■□□□□ 0.83
MAP1LC3B-202ENST00000561823 AP5M1Q9H0R1 490 aa20.24■□□□□ 0.83
MAP1LC3B-202ENST00000561823 E7EWF7 191 aa20.23■□□□□ 0.83
MAP1LC3B-202ENST00000561823 DYNC1LI2O43237 492 aaPredicted RBP20.23■□□□□ 0.83
MAP1LC3B-202ENST00000561823 FSCN1Q16658 493 aaKnown RBP20.23■□□□□ 0.83
MAP1LC3B-202ENST00000561823 TMEM63BQ5T3F8 832 aa20.23■□□□□ 0.83
MAP1LC3B-202ENST00000561823 KIAA1211Q6ZU35 1233 aa20.23■□□□□ 0.83
MAP1LC3B-202ENST00000561823 STAG2Q8N3U4 1231 aa20.23■□□□□ 0.83
MAP1LC3B-202ENST00000561823 JMJD4Q9H9V9 463 aa20.23■□□□□ 0.83
MAP1LC3B-202ENST00000561823 TMEM39AQ9NV64 488 aa20.23■□□□□ 0.83
MAP1LC3B-202ENST00000561823 TAF6LQ9Y6J9 622 aa20.23■□□□□ 0.83
MAP1LC3B-202ENST00000561823 ABCB11O95342 1321 aa20.23■□□□□ 0.83
MAP1LC3B-202ENST00000561823 MROH7Q68CQ1 1323 aa20.23■□□□□ 0.83
MAP1LC3B-202ENST00000561823 A0A0U1RQG5 324 aaPredicted RBP20.22■□□□□ 0.83
MAP1LC3B-202ENST00000561823 RBM47A0AV96 593 aaKnown RBP20.22■□□□□ 0.83
MAP1LC3B-202ENST00000561823 PTGS1P23219 599 aa20.22■□□□□ 0.83
MAP1LC3B-202ENST00000561823 EDNRBP24530 442 aa20.22■□□□□ 0.83
MAP1LC3B-202ENST00000561823 QRICH1Q2TAL8 776 aa20.22■□□□□ 0.83
MAP1LC3B-202ENST00000561823 DUSP28Q4G0W2 176 aa20.22■□□□□ 0.83
MAP1LC3B-202ENST00000561823 MPHOSPH6Q99547 160 aaKnown RBP20.22■□□□□ 0.83
MAP1LC3B-202ENST00000561823 VAT1LQ9HCJ6 419 aa20.22■□□□□ 0.83
MAP1LC3B-202ENST00000561823 LCTP09848 1927 aa20.21■□□□□ 0.83
MAP1LC3B-202ENST00000561823 LTBP2Q14767 1821 aa20.21■□□□□ 0.83
MAP1LC3B-202ENST00000561823 ARVCFO00192 962 aa20.21■□□□□ 0.83
MAP1LC3B-202ENST00000561823 DHX16O60231 1041 aaKnown RBP20.21■□□□□ 0.83
MAP1LC3B-202ENST00000561823 RAG1P15918 1043 aa20.21■□□□□ 0.83
MAP1LC3B-202ENST00000561823 CXCL17Q6UXB2 119 aa20.21■□□□□ 0.83
MAP1LC3B-202ENST00000561823 RALYLQ86SE5 291 aaKnown RBP20.21■□□□□ 0.83
MAP1LC3B-202ENST00000561823 FBXO11Q86XK2 927 aa20.21■□□□□ 0.83
MAP1LC3B-202ENST00000561823 NCOA7Q8NI08 942 aa20.21■□□□□ 0.83
MAP1LC3B-202ENST00000561823 WDR11Q9BZH6 1224 aa20.21■□□□□ 0.83
MAP1LC3B-202ENST00000561823 MAD2L2Q9UI95 211 aa20.21■□□□□ 0.83
MAP1LC3B-202ENST00000561823 LRRC37A2A6NM11 1700 aa20.21■□□□□ 0.83
MAP1LC3B-202ENST00000561823 PALM3A6NDB9 673 aaPredicted RBP20.2■□□□□ 0.82
MAP1LC3B-202ENST00000561823 KLRF2D3W0D1 207 aa20.2■□□□□ 0.82
MAP1LC3B-202ENST00000561823 IFIT3O14879 490 aaKnown RBP20.2■□□□□ 0.82
MAP1LC3B-202ENST00000561823 ZEB2O60315 1214 aa20.2■□□□□ 0.82
MAP1LC3B-202ENST00000561823 CABYRO75952 493 aa20.2■□□□□ 0.82
MAP1LC3B-202ENST00000561823 PDE4DQ08499 809 aa20.2■□□□□ 0.82
MAP1LC3B-202ENST00000561823 SHHQ15465 462 aa20.2■□□□□ 0.82
MAP1LC3B-202ENST00000561823 STOX1Q6ZVD7 989 aa20.2■□□□□ 0.82
MAP1LC3B-202ENST00000561823 SLC43A3Q8NBI5 491 aa20.2■□□□□ 0.82
MAP1LC3B-202ENST00000561823 TBC1D5Q92609 795 aa20.2■□□□□ 0.82
MAP1LC3B-202ENST00000561823 MRPL11Q9Y3B7 192 aaKnown RBP20.2■□□□□ 0.82
MAP1LC3B-202ENST00000561823 RBM8AQ9Y5S9 174 aaKnown RBP20.2■□□□□ 0.82
MAP1LC3B-202ENST00000561823 ERICH2A1L162 156 aa20.19■□□□□ 0.82
MAP1LC3B-202ENST00000561823 B4DLN1 442 aa20.19■□□□□ 0.82
MAP1LC3B-202ENST00000561823 MRPL12P52815 198 aaKnown RBP20.19■□□□□ 0.82
MAP1LC3B-202ENST00000561823 C9orf50Q5SZB4 431 aa20.19■□□□□ 0.82
MAP1LC3B-202ENST00000561823 CENPQQ7L2Z9 268 aaPredicted RBP20.19■□□□□ 0.82
MAP1LC3B-202ENST00000561823 MCF2L2Q86YR7 1114 aa20.19■□□□□ 0.82
MAP1LC3B-202ENST00000561823 SYTL5Q8TDW5 730 aaPredicted RBP20.19■□□□□ 0.82
MAP1LC3B-202ENST00000561823 MTMR8Q96EF0 704 aa20.19■□□□□ 0.82
MAP1LC3B-202ENST00000561823 TBX21Q9UL17 535 aa20.19■□□□□ 0.82
MAP1LC3B-202ENST00000561823 GRM4Q14833 912 aa20.18■□□□□ 0.82
MAP1LC3B-202ENST00000561823 SART3Q15020 963 aaKnown RBP20.18■□□□□ 0.82
MAP1LC3B-202ENST00000561823 CHST3Q7LGC8 479 aa20.18■□□□□ 0.82
MAP1LC3B-202ENST00000561823 FAM126BQ8IXS8 530 aa20.18■□□□□ 0.82
MAP1LC3B-202ENST00000561823 AMNQ9BXJ7 453 aa20.18■□□□□ 0.82
MAP1LC3B-202ENST00000561823 SENP2Q9HC62 589 aa20.18■□□□□ 0.82
MAP1LC3B-202ENST00000561823 COL20A1Q9P218 1284 aa20.18■□□□□ 0.82
MAP1LC3B-202ENST00000561823 TIMP1P01033 207 aa20.17■□□□□ 0.82
MAP1LC3B-202ENST00000561823 ANTXR2P58335 489 aa20.17■□□□□ 0.82
MAP1LC3B-202ENST00000561823 TROAPQ12815 778 aa20.17■□□□□ 0.82
MAP1LC3B-202ENST00000561823 WTAPQ15007 396 aa20.17■□□□□ 0.82
MAP1LC3B-202ENST00000561823 MB21D2Q8IYB1 491 aaPredicted RBP20.17■□□□□ 0.82
MAP1LC3B-202ENST00000561823 DEFB123Q8N688 67 aa20.17■□□□□ 0.82
MAP1LC3B-202ENST00000561823 IGDCC4Q8TDY8 1250 aa20.17■□□□□ 0.82
MAP1LC3B-202ENST00000561823 NSUN6Q8TEA1 469 aaKnown RBP20.17■□□□□ 0.82
MAP1LC3B-202ENST00000561823 SCFD2Q8WU76 684 aa20.17■□□□□ 0.82
MAP1LC3B-202ENST00000561823 TAAR1Q96RJ0 339 aa20.17■□□□□ 0.82
MAP1LC3B-202ENST00000561823 ESYT1Q9BSJ8 1104 aa20.17■□□□□ 0.82
MAP1LC3B-202ENST00000561823 SEZ6LQ9BYH1 1024 aa20.17■□□□□ 0.82
MAP1LC3B-202ENST00000561823 LSG1Q9H089 658 aaKnown RBP20.17■□□□□ 0.82
MAP1LC3B-202ENST00000561823 GRIN2DO15399 1336 aa20.17■□□□□ 0.82
MAP1LC3B-202ENST00000561823 ZBTB5O15062 677 aa20.16■□□□□ 0.82
MAP1LC3B-202ENST00000561823 NKRFO15226 690 aaKnown RBP eCLIP20.16■□□□□ 0.82
MAP1LC3B-202ENST00000561823 TLR3O15455 904 aaKnown RBP20.16■□□□□ 0.82
MAP1LC3B-202ENST00000561823 CD4P01730 458 aa20.16■□□□□ 0.82
MAP1LC3B-202ENST00000561823 EPHB4P54760 987 aa20.16■□□□□ 0.82
MAP1LC3B-202ENST00000561823 FPGSQ05932 587 aa20.16■□□□□ 0.82
MAP1LC3B-202ENST00000561823 ITGA7Q13683 1181 aa20.16■□□□□ 0.82
MAP1LC3B-202ENST00000561823 SLC35G1Q2M3R5 365 aa20.16■□□□□ 0.82
MAP1LC3B-202ENST00000561823 TMEM67Q5HYA8 995 aa20.16■□□□□ 0.82
MAP1LC3B-202ENST00000561823 RIOX1Q9H6W3 641 aa20.16■□□□□ 0.82
MAP1LC3B-202ENST00000561823 OPLAHO14841 1288 aa20.15■□□□□ 0.82
MAP1LC3B-202ENST00000561823 PPP1R11O60927 126 aaPredicted RBP20.15■□□□□ 0.82
MAP1LC3B-202ENST00000561823 CPT1AP50416 773 aa20.15■□□□□ 0.82
MAP1LC3B-202ENST00000561823 PPP2R5BQ15173 497 aa20.15■□□□□ 0.82
MAP1LC3B-202ENST00000561823 BMP2KLQ5H9B9 411 aa20.15■□□□□ 0.82
MAP1LC3B-202ENST00000561823 MFSD5Q6N075 450 aa20.15■□□□□ 0.82
MAP1LC3B-202ENST00000561823 Q7L0L9 218 aa20.15■□□□□ 0.82
MAP1LC3B-202ENST00000561823 OR6J1Q8NGC5 347 aa20.15■□□□□ 0.82
MAP1LC3B-202ENST00000561823 IWS1Q96ST2 819 aa20.15■□□□□ 0.82
MAP1LC3B-202ENST00000561823 RMDN3Q96TC7 470 aa20.15■□□□□ 0.82
MAP1LC3B-202ENST00000561823 POLR3EQ9NVU0 708 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms