RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 INCENPQ9NQS7 918 aa9.92□□□□□ -0.82
PALB2-202ENST00000561514 PDGFCQ9NRA1 345 aa9.92□□□□□ -0.82
PALB2-202ENST00000561514 CXXC1Q9P0U4 656 aaPredicted RBP9.92□□□□□ -0.82
PALB2-202ENST00000561514 PNMA2Q9UL42 364 aa9.92□□□□□ -0.82
PALB2-202ENST00000561514 CCPG1Q9ULG6 757 aa9.92□□□□□ -0.82
PALB2-202ENST00000561514 GRXCR1A8MXD5 290 aa9.91□□□□□ -0.82
PALB2-202ENST00000561514 NFIBO00712 420 aa9.91□□□□□ -0.82
PALB2-202ENST00000561514 B4GALT4O60513 344 aa9.91□□□□□ -0.82
PALB2-202ENST00000561514 ACRP10323 421 aa9.91□□□□□ -0.82
PALB2-202ENST00000561514 PDHBP11177 359 aa9.91□□□□□ -0.82
PALB2-202ENST00000561514 PCP11498 1178 aaKnown RBP9.91□□□□□ -0.82
PALB2-202ENST00000561514 PTGS1P23219 599 aa9.91□□□□□ -0.82
PALB2-202ENST00000561514 NT5C2P49902 561 aa9.91□□□□□ -0.82
PALB2-202ENST00000561514 PDE1AP54750 535 aa9.91□□□□□ -0.82
PALB2-202ENST00000561514 IKQ13123 557 aaPredicted RBP9.91□□□□□ -0.82
PALB2-202ENST00000561514 HDAC1Q13547 482 aaPredicted RBP9.91□□□□□ -0.82
PALB2-202ENST00000561514 TJAP1Q5JTD0 557 aa9.91□□□□□ -0.82
PALB2-202ENST00000561514 TMEM63BQ5T3F8 832 aa9.91□□□□□ -0.82
PALB2-202ENST00000561514 SYDE2Q5VT97 1194 aa9.91□□□□□ -0.82
PALB2-202ENST00000561514 CLEC4DQ8WXI8 215 aa9.91□□□□□ -0.82
PALB2-202ENST00000561514 TMEM47Q9BQJ4 181 aa9.91□□□□□ -0.82
PALB2-202ENST00000561514 AP5M1Q9H0R1 490 aa9.91□□□□□ -0.82
PALB2-202ENST00000561514 ALDH8A1Q9H2A2 487 aaPredicted RBP9.91□□□□□ -0.82
PALB2-202ENST00000561514 MTIF3Q9H2K0 278 aaKnown RBP9.91□□□□□ -0.82
PALB2-202ENST00000561514 ADD3Q9UEY8 706 aaKnown RBP9.91□□□□□ -0.82
PALB2-202ENST00000561514 DDX49Q9Y6V7 483 aaKnown RBP9.91□□□□□ -0.82
PALB2-202ENST00000561514 MYH4Q9Y623 1939 aa9.9□□□□□ -0.82
PALB2-202ENST00000561514 A0A0D9SFI3 127 aa9.9□□□□□ -0.82
PALB2-202ENST00000561514 DYNC1LI2O43237 492 aaPredicted RBP9.9□□□□□ -0.82
PALB2-202ENST00000561514 RANBP6O60518 1105 aaKnown RBP9.9□□□□□ -0.82
PALB2-202ENST00000561514 FGAP02671 866 aa9.9□□□□□ -0.82
PALB2-202ENST00000561514 PFKMP08237 780 aa9.9□□□□□ -0.82
PALB2-202ENST00000561514 ALDH5A1P51649 535 aaPredicted RBP9.9□□□□□ -0.82
PALB2-202ENST00000561514 SNAP25P60880 206 aa9.9□□□□□ -0.82
PALB2-202ENST00000561514 PURAQ00577 322 aaKnown RBP9.9□□□□□ -0.82
PALB2-202ENST00000561514 ZNF543Q08ER8 600 aa9.9□□□□□ -0.82
PALB2-202ENST00000561514 BAATQ14032 418 aaPredicted RBP9.9□□□□□ -0.82
PALB2-202ENST00000561514 ADGRE1Q14246 886 aa9.9□□□□□ -0.82
PALB2-202ENST00000561514 TTBK2Q6IQ55 1244 aa9.9□□□□□ -0.82
PALB2-202ENST00000561514 NSMFQ6X4W1 530 aa9.9□□□□□ -0.82
PALB2-202ENST00000561514 VTI1AQ96AJ9 217 aa9.9□□□□□ -0.82
PALB2-202ENST00000561514 PURBQ96QR8 312 aaKnown RBP9.9□□□□□ -0.82
PALB2-202ENST00000561514 TRPV6Q9H1D0 765 aa9.9□□□□□ -0.82
PALB2-202ENST00000561514 PRDM6Q9NQX0 595 aa9.9□□□□□ -0.82
PALB2-202ENST00000561514 POLR3EQ9NVU0 708 aa9.9□□□□□ -0.82
PALB2-202ENST00000561514 SSUH2Q9Y2M2 353 aa9.9□□□□□ -0.82
PALB2-202ENST00000561514 YBX2Q9Y2T7 364 aaKnown RBP9.9□□□□□ -0.82
PALB2-202ENST00000561514 A6NJR5 290 aa9.89□□□□□ -0.83
PALB2-202ENST00000561514 NKRFO15226 690 aaKnown RBP eCLIP9.89□□□□□ -0.83
PALB2-202ENST00000561514 FGBP02675 491 aa9.89□□□□□ -0.83
PALB2-202ENST00000561514 HSPD1P10809 573 aaKnown RBP9.89□□□□□ -0.83
PALB2-202ENST00000561514 SLC16A2P36021 539 aa9.89□□□□□ -0.83
PALB2-202ENST00000561514 RRP1P56182 461 aaKnown RBP9.89□□□□□ -0.83
PALB2-202ENST00000561514 PSMC6P62333 389 aa9.89□□□□□ -0.83
PALB2-202ENST00000561514 CCDC96Q2M329 555 aa9.89□□□□□ -0.83
PALB2-202ENST00000561514 MCMDC2Q4G0Z9 681 aa9.89□□□□□ -0.83
PALB2-202ENST00000561514 SLC30A10Q6XR72 485 aa9.89□□□□□ -0.83
PALB2-202ENST00000561514 KIAA1211Q6ZU35 1233 aa9.89□□□□□ -0.83
PALB2-202ENST00000561514 NOL8Q76FK4 1167 aaKnown RBP9.89□□□□□ -0.83
PALB2-202ENST00000561514 ZNF589Q86UQ0 364 aaPredicted RBP9.89□□□□□ -0.83
PALB2-202ENST00000561514 RGS22Q8NE09 1264 aa9.89□□□□□ -0.83
PALB2-202ENST00000561514 DNERQ8NFT8 737 aa9.89□□□□□ -0.83
PALB2-202ENST00000561514 ATXN2LQ8WWM7 1075 aaKnown RBP9.89□□□□□ -0.83
PALB2-202ENST00000561514 FAM227BQ96M60 508 aa9.89□□□□□ -0.83
PALB2-202ENST00000561514 TTC14Q96N46 770 aa9.89□□□□□ -0.83
PALB2-202ENST00000561514 GAS2L1Q99501 681 aaPredicted RBP9.89□□□□□ -0.83
PALB2-202ENST00000561514 WDR11Q9BZH6 1224 aa9.89□□□□□ -0.83
PALB2-202ENST00000561514 MSRAQ9UJ68 235 aa9.89□□□□□ -0.83
PALB2-202ENST00000561514 MCM3APO60318 1980 aa9.88□□□□□ -0.83
PALB2-202ENST00000561514 TNKSO95271 1327 aa9.88□□□□□ -0.83
PALB2-202ENST00000561514 CCDC171Q6TFL3 1326 aa9.88□□□□□ -0.83
PALB2-202ENST00000561514 LCTP09848 1927 aa9.88□□□□□ -0.83
PALB2-202ENST00000561514 PITPNM1O00562 1244 aa9.88□□□□□ -0.83
PALB2-202ENST00000561514 SUPT20HL2P0C7V6 817 aa9.88□□□□□ -0.83
PALB2-202ENST00000561514 POU3F3P20264 500 aaPredicted RBP9.88□□□□□ -0.83
PALB2-202ENST00000561514 CPT1AP50416 773 aa9.88□□□□□ -0.83
PALB2-202ENST00000561514 RPS6P62753 249 aaKnown RBP9.88□□□□□ -0.83
PALB2-202ENST00000561514 PTPN11Q06124 597 aaPredicted RBP9.88□□□□□ -0.83
PALB2-202ENST00000561514 NFRKBQ6P4R8 1299 aa9.88□□□□□ -0.83
PALB2-202ENST00000561514 EEPD1Q7L9B9 569 aa9.88□□□□□ -0.83
PALB2-202ENST00000561514 TBC1D10CQ8IV04 446 aa9.88□□□□□ -0.83
PALB2-202ENST00000561514 RPUSD2Q8IZ73 545 aaKnown RBP9.88□□□□□ -0.83
PALB2-202ENST00000561514 ANKS1AQ92625 1134 aa9.88□□□□□ -0.83
PALB2-202ENST00000561514 PRDM12Q9H4Q4 367 aa9.88□□□□□ -0.83
PALB2-202ENST00000561514 ISY1Q9ULR0 285 aaKnown RBP9.88□□□□□ -0.83
PALB2-202ENST00000561514 PCDHA11Q9Y5I1 949 aa9.88□□□□□ -0.83
PALB2-202ENST00000561514 SCN10AQ9Y5Y9 1956 aa9.87□□□□□ -0.83
PALB2-202ENST00000561514 KPNA6O60684 536 aa9.87□□□□□ -0.83
PALB2-202ENST00000561514 RFC2P35250 354 aa9.87□□□□□ -0.83
PALB2-202ENST00000561514 CCL23P55773 120 aa9.87□□□□□ -0.83
PALB2-202ENST00000561514 GHRHRQ02643 423 aa9.87□□□□□ -0.83
PALB2-202ENST00000561514 RBL2Q08999 1139 aa9.87□□□□□ -0.83
PALB2-202ENST00000561514 NMIQ13287 307 aaPredicted RBP9.87□□□□□ -0.83
PALB2-202ENST00000561514 AAMPQ13685 434 aa9.87□□□□□ -0.83
PALB2-202ENST00000561514 GPATCH4Q5T3I0 446 aaKnown RBP9.87□□□□□ -0.83
PALB2-202ENST00000561514 ANKRD45Q5TZF3 282 aa9.87□□□□□ -0.83
PALB2-202ENST00000561514 CCDC62Q6P9F0 684 aa9.87□□□□□ -0.83
PALB2-202ENST00000561514 OTOP2Q7RTS6 562 aa9.87□□□□□ -0.83
PALB2-202ENST00000561514 SESTD1Q86VW0 696 aa9.87□□□□□ -0.83
PALB2-202ENST00000561514 DGKHQ86XP1 1220 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms