RNA–Protein interactions for RNA: ENST00000561377.1

HMBOX1-216, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 307 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-216ENST00000561377 TRBV23OR9-2A0A075B6M9 112 aa8.04□□□□□ -1.12
HMBOX1-216ENST00000561377 C2orf71A6NGG8 1288 aa8.04□□□□□ -1.12
HMBOX1-216ENST00000561377 LIMS1P48059 325 aa8.04□□□□□ -1.12
HMBOX1-216ENST00000561377 PRR5P85299 388 aa8.04□□□□□ -1.12
HMBOX1-216ENST00000561377 NFIXQ14938 502 aa8.04□□□□□ -1.12
HMBOX1-216ENST00000561377 C9orf131Q5VYM1 1079 aa8.04□□□□□ -1.12
HMBOX1-216ENST00000561377 HOMEZQ8IX15 550 aa8.04□□□□□ -1.12
HMBOX1-216ENST00000561377 TGIF2Q9GZN2 237 aa8.04□□□□□ -1.12
HMBOX1-216ENST00000561377 RNF38Q9H0F5 515 aa8.04□□□□□ -1.12
HMBOX1-216ENST00000561377 XYLT2Q9H1B5 865 aa8.04□□□□□ -1.12
HMBOX1-216ENST00000561377 LUC7LQ9NQ29 371 aaKnown RBP8.04□□□□□ -1.12
HMBOX1-216ENST00000561377 RTEL1Q9NZ71 1219 aa8.04□□□□□ -1.12
HMBOX1-216ENST00000561377 HCFC2Q9Y5Z7 792 aa8.04□□□□□ -1.12
HMBOX1-216ENST00000561377 ZC3H12DA2A288 527 aaKnown RBP8.03□□□□□ -1.12
HMBOX1-216ENST00000561377 ANKRD34BA5PLL1 514 aa8.03□□□□□ -1.12
HMBOX1-216ENST00000561377 KIAA1211LQ6NV74 962 aa8.03□□□□□ -1.12
HMBOX1-216ENST00000561377 VHLLQ6RSH7 139 aa8.03□□□□□ -1.12
HMBOX1-216ENST00000561377 LZTR1Q8N653 840 aa8.03□□□□□ -1.12
HMBOX1-216ENST00000561377 OTOL1A6NHN0 477 aaPredicted RBP8.02□□□□□ -1.13
HMBOX1-216ENST00000561377 GLI4P10075 376 aa8.02□□□□□ -1.13
HMBOX1-216ENST00000561377 NAT2P11245 290 aa8.02□□□□□ -1.13
HMBOX1-216ENST00000561377 SYN1P17600 705 aa8.02□□□□□ -1.13
HMBOX1-216ENST00000561377 PAMP19021 973 aa8.02□□□□□ -1.13
HMBOX1-216ENST00000561377 FBLN1P23142 703 aa8.02□□□□□ -1.13
HMBOX1-216ENST00000561377 CRACR2BQ8N4Y2 399 aaPredicted RBP8.02□□□□□ -1.13
HMBOX1-216ENST00000561377 NUDT5Q9UKK9 219 aa8.02□□□□□ -1.13
HMBOX1-216ENST00000561377 FAN1Q9Y2M0 1017 aa8.02□□□□□ -1.13
HMBOX1-216ENST00000561377 FOXD2O60548 495 aaPredicted RBP8.01□□□□□ -1.13
HMBOX1-216ENST00000561377 NCAM1P13591 858 aa8.01□□□□□ -1.13
HMBOX1-216ENST00000561377 FOXO4P98177 505 aa8.01□□□□□ -1.13
HMBOX1-216ENST00000561377 NETO2Q8NC67 525 aa8.01□□□□□ -1.13
HMBOX1-216ENST00000561377 FEZF2Q8TBJ5 459 aa8.01□□□□□ -1.13
HMBOX1-216ENST00000561377 ALG3Q92685 438 aa8.01□□□□□ -1.13
HMBOX1-216ENST00000561377 CCSER2Q9H7U1 834 aa8.01□□□□□ -1.13
HMBOX1-216ENST00000561377 SUSD2Q9UGT4 822 aa8.01□□□□□ -1.13
HMBOX1-216ENST00000561377 AKT3Q9Y243 479 aa8.01□□□□□ -1.13
HMBOX1-216ENST00000561377 INPP5FQ9Y2H2 1132 aa8.01□□□□□ -1.13
HMBOX1-216ENST00000561377 RWDD3Q9Y3V2 267 aa8.01□□□□□ -1.13
HMBOX1-216ENST00000561377 NPHP3-ACAD11A0A0J9YXS1 232 aa8□□□□□ -1.13
HMBOX1-216ENST00000561377 BUD31P41223 144 aaPredicted RBP8□□□□□ -1.13
HMBOX1-216ENST00000561377 ZNF143P52747 638 aaPredicted RBP8□□□□□ -1.13
HMBOX1-216ENST00000561377 TRIM26Q12899 539 aaPredicted RBP8□□□□□ -1.13
HMBOX1-216ENST00000561377 ERICH6BQ5W0A0 696 aa8□□□□□ -1.13
HMBOX1-216ENST00000561377 POMZP3Q6PJE2 187 aa8□□□□□ -1.13
HMBOX1-216ENST00000561377 CPNE8Q86YQ8 564 aa8□□□□□ -1.13
HMBOX1-216ENST00000561377 TSPAN17Q96FV3 270 aa8□□□□□ -1.13
HMBOX1-216ENST00000561377 PEX11GQ96HA9 241 aa8□□□□□ -1.13
HMBOX1-216ENST00000561377 APBA2Q99767 749 aa8□□□□□ -1.13
HMBOX1-216ENST00000561377 KIAA1522Q9P206 1035 aaPredicted RBP8□□□□□ -1.13
HMBOX1-216ENST00000561377 PMF1-BGLAPU3KQ54 211 aa8□□□□□ -1.13
HMBOX1-216ENST00000561377 ATF2P15336 505 aa7.99□□□□□ -1.13
HMBOX1-216ENST00000561377 TP53I13Q8NBR0 393 aaPredicted RBP7.99□□□□□ -1.13
HMBOX1-216ENST00000561377 CXorf38Q8TB03 319 aa7.99□□□□□ -1.13
HMBOX1-216ENST00000561377 ACBD3Q9H3P7 528 aa7.99□□□□□ -1.13
HMBOX1-216ENST00000561377 NOP56O00567 594 aaKnown RBP7.98□□□□□ -1.13
HMBOX1-216ENST00000561377 FFAR3O14843 346 aa7.98□□□□□ -1.13
HMBOX1-216ENST00000561377 NPHS1O60500 1241 aa7.98□□□□□ -1.13
HMBOX1-216ENST00000561377 ASGR2P07307 311 aa7.98□□□□□ -1.13
HMBOX1-216ENST00000561377 SLC9A5Q14940 896 aa7.98□□□□□ -1.13
HMBOX1-216ENST00000561377 NCAPHQ15003 741 aa7.98□□□□□ -1.13
HMBOX1-216ENST00000561377 ZDHHC14Q8IZN3 488 aa7.98□□□□□ -1.13
HMBOX1-216ENST00000561377 FAM169BQ8N8A8 192 aa7.98□□□□□ -1.13
HMBOX1-216ENST00000561377 BVESQ8NE79 360 aa7.98□□□□□ -1.13
HMBOX1-216ENST00000561377 USP33Q8TEY7 942 aa7.98□□□□□ -1.13
HMBOX1-216ENST00000561377 FNIP1Q8TF40 1166 aa7.98□□□□□ -1.13
HMBOX1-216ENST00000561377 ANAPC16Q96DE5 110 aa7.98□□□□□ -1.13
HMBOX1-216ENST00000561377 MTA3Q9BTC8 594 aa7.98□□□□□ -1.13
HMBOX1-216ENST00000561377 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.98□□□□□ -1.13
HMBOX1-216ENST00000561377 GULP1Q9UBP9 304 aa7.98□□□□□ -1.13
HMBOX1-216ENST00000561377 PLA2G2DQ9UNK4 145 aa7.98□□□□□ -1.13
HMBOX1-216ENST00000561377 EMC9Q9Y3B6 208 aa7.98□□□□□ -1.13
HMBOX1-216ENST00000561377 KCNH1O95259 989 aa7.97□□□□□ -1.13
HMBOX1-216ENST00000561377 ZBTB7AO95365 584 aa7.97□□□□□ -1.13
HMBOX1-216ENST00000561377 KCNC1P48547 511 aa7.97□□□□□ -1.13
HMBOX1-216ENST00000561377 ZNF513Q8N8E2 541 aaPredicted RBP7.97□□□□□ -1.13
HMBOX1-216ENST00000561377 SYT8Q8NBV8 401 aa7.97□□□□□ -1.13
HMBOX1-216ENST00000561377 RXFP1Q9HBX9 757 aa7.97□□□□□ -1.13
HMBOX1-216ENST00000561377 APEX2Q9UBZ4 518 aa7.97□□□□□ -1.13
HMBOX1-216ENST00000561377 C7orf72A4D263 438 aa7.96□□□□□ -1.14
HMBOX1-216ENST00000561377 PLA2G1BP04054 148 aaKnown RBP7.96□□□□□ -1.14
HMBOX1-216ENST00000561377 SLURP1P55000 103 aa7.96□□□□□ -1.14
HMBOX1-216ENST00000561377 VWA3BQ502W6 1294 aa7.96□□□□□ -1.14
HMBOX1-216ENST00000561377 WWC2Q6AWC2 1192 aa7.96□□□□□ -1.14
HMBOX1-216ENST00000561377 B3GNT8Q7Z7M8 397 aa7.96□□□□□ -1.14
HMBOX1-216ENST00000561377 COPS5Q92905 334 aa7.96□□□□□ -1.14
HMBOX1-216ENST00000561377 TEPSINQ96N21 525 aa7.96□□□□□ -1.14
HMBOX1-216ENST00000561377 MMP19Q99542 508 aa7.96□□□□□ -1.14
HMBOX1-216ENST00000561377 FBLN5Q9UBX5 448 aa7.96□□□□□ -1.14
HMBOX1-216ENST00000561377 UNCXA6NJT0 531 aa7.95□□□□□ -1.14
HMBOX1-216ENST00000561377 PMLP29590 882 aa7.95□□□□□ -1.14
HMBOX1-216ENST00000561377 MC3RP41968 323 aa7.95□□□□□ -1.14
HMBOX1-216ENST00000561377 HTRA3P83110 453 aa7.95□□□□□ -1.14
HMBOX1-216ENST00000561377 SCRN1Q12765 414 aa7.95□□□□□ -1.14
HMBOX1-216ENST00000561377 FRMD5Q7Z6J6 570 aa7.95□□□□□ -1.14
HMBOX1-216ENST00000561377 CLEC1BQ9P126 229 aa7.95□□□□□ -1.14
HMBOX1-216ENST00000561377 PPP1R11O60927 126 aaPredicted RBP7.94□□□□□ -1.14
HMBOX1-216ENST00000561377 PLS3P13797 630 aa7.94□□□□□ -1.14
HMBOX1-216ENST00000561377 ATF4P18848 351 aaPredicted RBP7.94□□□□□ -1.14
HMBOX1-216ENST00000561377 SAPCD2Q86UD0 394 aa7.94□□□□□ -1.14
HMBOX1-216ENST00000561377 TRIM59Q8IWR1 403 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms