RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-223ENST00000561304 CWC27Q6UX04 472 aaKnown RBP8.75□□□□□ -1.01
ZEB1-223ENST00000561304 AGBL1Q96MI9 1066 aa8.75□□□□□ -1.01
ZEB1-223ENST00000561304 GDF15Q99988 308 aa8.75□□□□□ -1.01
ZEB1-223ENST00000561304 TOMM22Q9NS69 142 aa8.75□□□□□ -1.01
ZEB1-223ENST00000561304 HOMER2Q9NSB8 354 aa8.75□□□□□ -1.01
ZEB1-223ENST00000561304 ISY1Q9ULR0 285 aaKnown RBP8.75□□□□□ -1.01
ZEB1-223ENST00000561304 DDX49Q9Y6V7 483 aaKnown RBP8.75□□□□□ -1.01
ZEB1-223ENST00000561304 ASTN1O14525 1302 aa8.75□□□□□ -1.01
ZEB1-223ENST00000561304 GBF1Q92538 1859 aa8.75□□□□□ -1.01
ZEB1-223ENST00000561304 FRMPD2Q68DX3 1309 aaPredicted RBP8.74□□□□□ -1.01
ZEB1-223ENST00000561304 ZBED4O75132 1171 aa8.74□□□□□ -1.01
ZEB1-223ENST00000561304 COPB2P35606 906 aa8.74□□□□□ -1.01
ZEB1-223ENST00000561304 MAGEA10P43363 369 aaPredicted RBP8.74□□□□□ -1.01
ZEB1-223ENST00000561304 CNTN2Q02246 1040 aa8.74□□□□□ -1.01
ZEB1-223ENST00000561304 LRRC41Q15345 812 aa8.74□□□□□ -1.01
ZEB1-223ENST00000561304 MUM1L1Q5H9M0 696 aa8.74□□□□□ -1.01
ZEB1-223ENST00000561304 CCDC174Q6PII3 467 aa8.74□□□□□ -1.01
ZEB1-223ENST00000561304 TICAM2Q86XR7 235 aa8.74□□□□□ -1.01
ZEB1-223ENST00000561304 STAG1Q8WVM7 1258 aa8.74□□□□□ -1.01
ZEB1-223ENST00000561304 TMEM47Q9BQJ4 181 aa8.74□□□□□ -1.01
ZEB1-223ENST00000561304 ZKSCAN3Q9BRR0 538 aa8.74□□□□□ -1.01
ZEB1-223ENST00000561304 SLC5A4Q9NY91 659 aa8.74□□□□□ -1.01
ZEB1-223ENST00000561304 PRR12Q9ULL5 1215 aa8.74□□□□□ -1.01
ZEB1-223ENST00000561304 DIS3Q9Y2L1 958 aaKnown RBP8.74□□□□□ -1.01
ZEB1-223ENST00000561304 BAZ2BQ9UIF8 2168 aaKnown RBP8.74□□□□□ -1.01
ZEB1-223ENST00000561304 MYH7BA7E2Y1 1941 aa8.74□□□□□ -1.01
ZEB1-223ENST00000561304 SYNGAP1Q96PV0 1343 aa8.74□□□□□ -1.01
ZEB1-223ENST00000561304 MYADML2A6NDP7 307 aa8.73□□□□□ -1.01
ZEB1-223ENST00000561304 PLA2G6O60733 806 aa8.73□□□□□ -1.01
ZEB1-223ENST00000561304 PGK1P00558 417 aa8.73□□□□□ -1.01
ZEB1-223ENST00000561304 SLC16A2P36021 539 aa8.73□□□□□ -1.01
ZEB1-223ENST00000561304 OAZ1P54368 228 aa8.73□□□□□ -1.01
ZEB1-223ENST00000561304 RTP1P59025 263 aa8.73□□□□□ -1.01
ZEB1-223ENST00000561304 IKQ13123 557 aaPredicted RBP8.73□□□□□ -1.01
ZEB1-223ENST00000561304 CCDC96Q2M329 555 aa8.73□□□□□ -1.01
ZEB1-223ENST00000561304 AKNAD1Q5T1N1 836 aa8.73□□□□□ -1.01
ZEB1-223ENST00000561304 TTC22Q5TAA0 569 aa8.73□□□□□ -1.01
ZEB1-223ENST00000561304 MAMDC4Q6UXC1 1216 aa8.73□□□□□ -1.01
ZEB1-223ENST00000561304 FAM160B2Q86V87 743 aa8.73□□□□□ -1.01
ZEB1-223ENST00000561304 FERMT2Q96AC1 680 aa8.73□□□□□ -1.01
ZEB1-223ENST00000561304 PURBQ96QR8 312 aaKnown RBP8.73□□□□□ -1.01
ZEB1-223ENST00000561304 PRR14Q9BWN1 585 aa8.73□□□□□ -1.01
ZEB1-223ENST00000561304 KATNBL1Q9H079 304 aa8.73□□□□□ -1.01
ZEB1-223ENST00000561304 A1CFQ9NQ94 594 aaKnown RBP8.73□□□□□ -1.01
ZEB1-223ENST00000561304 RNF146Q9NTX7 359 aa8.73□□□□□ -1.01
ZEB1-223ENST00000561304 TCP11L1Q9NUJ3 509 aa8.73□□□□□ -1.01
ZEB1-223ENST00000561304 DOCK5Q9H7D0 1870 aa8.73□□□□□ -1.01
ZEB1-223ENST00000561304 SYNRGQ9UMZ2 1314 aa8.73□□□□□ -1.01
ZEB1-223ENST00000561304 KBTBD13C9JR72 458 aa8.73□□□□□ -1.01
ZEB1-223ENST00000561304 ADAMTS4O75173 837 aa8.73□□□□□ -1.01
ZEB1-223ENST00000561304 PDHBP11177 359 aa8.73□□□□□ -1.01
ZEB1-223ENST00000561304 TOP1P11387 765 aaKnown RBP8.73□□□□□ -1.01
ZEB1-223ENST00000561304 ALAS1P13196 640 aa8.73□□□□□ -1.01
ZEB1-223ENST00000561304 PTGS1P23219 599 aa8.73□□□□□ -1.01
ZEB1-223ENST00000561304 ADCYAP1R1P41586 468 aa8.73□□□□□ -1.01
ZEB1-223ENST00000561304 MDM2Q00987 491 aaPredicted RBP8.73□□□□□ -1.01
ZEB1-223ENST00000561304 SNX17Q15036 470 aa8.73□□□□□ -1.01
ZEB1-223ENST00000561304 MFSD6Q6ZSS7 791 aa8.73□□□□□ -1.01
ZEB1-223ENST00000561304 ARMCX2Q7L311 632 aa8.73□□□□□ -1.01
ZEB1-223ENST00000561304 ANKRD35Q8N283 1001 aa8.73□□□□□ -1.01
ZEB1-223ENST00000561304 FAM133AQ8N9E0 248 aa8.73□□□□□ -1.01
ZEB1-223ENST00000561304 CHST13Q8NET6 341 aa8.73□□□□□ -1.01
ZEB1-223ENST00000561304 DCAF4Q8WV16 495 aa8.73□□□□□ -1.01
ZEB1-223ENST00000561304 DDX11Q96FC9 970 aa8.73□□□□□ -1.01
ZEB1-223ENST00000561304 RANBP17Q9H2T7 1088 aaKnown RBP8.73□□□□□ -1.01
ZEB1-223ENST00000561304 CPVLQ9H3G5 476 aa8.73□□□□□ -1.01
ZEB1-223ENST00000561304 ACAD9Q9H845 621 aa8.73□□□□□ -1.01
ZEB1-223ENST00000561304 GPCPD1Q9NPB8 672 aa8.73□□□□□ -1.01
ZEB1-223ENST00000561304 XPNPEP3Q9NQH7 507 aa8.73□□□□□ -1.01
ZEB1-223ENST00000561304 DIAPH3Q9NSV4 1193 aa8.73□□□□□ -1.01
ZEB1-223ENST00000561304 NRBP1Q9UHY1 535 aa8.73□□□□□ -1.01
ZEB1-223ENST00000561304 ZHX1Q9UKY1 873 aaPredicted RBP8.73□□□□□ -1.01
ZEB1-223ENST00000561304 CTDP1Q9Y5B0 961 aaPredicted RBP8.73□□□□□ -1.01
ZEB1-223ENST00000561304 UNC80Q8N2C7 3258 aa8.72□□□□□ -1.01
ZEB1-223ENST00000561304 PRUNE2Q8WUY3 3088 aa8.72□□□□□ -1.01
ZEB1-223ENST00000561304 B4E1Z4 1266 aa8.72□□□□□ -1.01
ZEB1-223ENST00000561304 SNHG28P0DPA3 235 aa8.72□□□□□ -1.01
ZEB1-223ENST00000561304 RARBP10826 455 aa8.72□□□□□ -1.01
ZEB1-223ENST00000561304 AKR1A1P14550 325 aa8.72□□□□□ -1.01
ZEB1-223ENST00000561304 BMP8BP34820 402 aa8.72□□□□□ -1.01
ZEB1-223ENST00000561304 TRIM60Q495X7 471 aa8.72□□□□□ -1.01
ZEB1-223ENST00000561304 BTNL9Q6UXG8 535 aa8.72□□□□□ -1.01
ZEB1-223ENST00000561304 SLC39A5Q6ZMH5 540 aa8.72□□□□□ -1.01
ZEB1-223ENST00000561304 CCDC144CPQ8IYA2 1237 aa8.72□□□□□ -1.01
ZEB1-223ENST00000561304 MSL3Q8N5Y2 521 aaKnown RBP8.72□□□□□ -1.01
ZEB1-223ENST00000561304 ARRDC4Q8NCT1 418 aa8.72□□□□□ -1.01
ZEB1-223ENST00000561304 CHURC1Q8WUH1 139 aa8.72□□□□□ -1.01
ZEB1-223ENST00000561304 TRERF1Q96PN7 1200 aa8.72□□□□□ -1.01
ZEB1-223ENST00000561304 DSCC1Q9BVC3 393 aa8.72□□□□□ -1.01
ZEB1-223ENST00000561304 IRX2Q9BZI1 471 aaPredicted RBP8.72□□□□□ -1.01
ZEB1-223ENST00000561304 FBXO40Q9UH90 709 aa8.72□□□□□ -1.01
ZEB1-223ENST00000561304 CCPG1Q9ULG6 757 aa8.72□□□□□ -1.01
ZEB1-223ENST00000561304 PHF24Q9UPV7 400 aa8.72□□□□□ -1.01
ZEB1-223ENST00000561304 ATP11BQ9Y2G3 1177 aa8.72□□□□□ -1.01
ZEB1-223ENST00000561304 REV3LO60673 3130 aa8.71□□□□□ -1.01
ZEB1-223ENST00000561304 SCN5AQ14524 2016 aa8.71□□□□□ -1.01
ZEB1-223ENST00000561304 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.71□□□□□ -1.02
ZEB1-223ENST00000561304 A0A1W2PPC1 479 aa8.71□□□□□ -1.02
ZEB1-223ENST00000561304 A0A1W2PQ45 241 aaPredicted RBP8.71□□□□□ -1.02
ZEB1-223ENST00000561304 A0A1W2PQY0 241 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms