RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 ALDH5A1P51649 535 aaPredicted RBP16.13■□□□□ 0.17
TPM1-230ENST00000561266 FBXL16Q8N461 479 aa16.13■□□□□ 0.17
TPM1-230ENST00000561266 MSL3Q8N5Y2 521 aaKnown RBP16.13■□□□□ 0.17
TPM1-230ENST00000561266 SYTL5Q8TDW5 730 aaPredicted RBP16.13■□□□□ 0.17
TPM1-230ENST00000561266 MORC4Q8TE76 937 aa16.13■□□□□ 0.17
TPM1-230ENST00000561266 PAWRQ96IZ0 340 aaKnown RBP16.13■□□□□ 0.17
TPM1-230ENST00000561266 TM6SF1Q9BZW5 370 aa16.13■□□□□ 0.17
TPM1-230ENST00000561266 PDGFCQ9NRA1 345 aa16.13■□□□□ 0.17
TPM1-230ENST00000561266 PCDHA1Q9Y5I3 950 aa16.13■□□□□ 0.17
TPM1-230ENST00000561266 CNTNAP5Q8WYK1 1306 aa16.13■□□□□ 0.17
TPM1-230ENST00000561266 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.12■□□□□ 0.17
TPM1-230ENST00000561266 ZBTB43O43298 467 aa16.12■□□□□ 0.17
TPM1-230ENST00000561266 FARP2O94887 1054 aaPredicted RBP16.12■□□□□ 0.17
TPM1-230ENST00000561266 CALM1P0DP23 149 aa16.12■□□□□ 0.17
TPM1-230ENST00000561266 CALM2P0DP24 149 aa16.12■□□□□ 0.17
TPM1-230ENST00000561266 CALM3P0DP25 149 aa16.12■□□□□ 0.17
TPM1-230ENST00000561266 SMARCA1P28370 1054 aa16.12■□□□□ 0.17
TPM1-230ENST00000561266 KIF5BP33176 963 aa16.12■□□□□ 0.17
TPM1-230ENST00000561266 ADD1P35611 737 aaKnown RBP16.12■□□□□ 0.17
TPM1-230ENST00000561266 ACVR2BQ13705 512 aa16.12■□□□□ 0.17
TPM1-230ENST00000561266 EEPD1Q7L9B9 569 aa16.12■□□□□ 0.17
TPM1-230ENST00000561266 RGS22Q8NE09 1264 aa16.12■□□□□ 0.17
TPM1-230ENST00000561266 ZHX1Q9UKY1 873 aaPredicted RBP16.12■□□□□ 0.17
TPM1-230ENST00000561266 MRPL11Q9Y3B7 192 aaKnown RBP16.12■□□□□ 0.17
TPM1-230ENST00000561266 GOLGA8AA7E2F4 631 aa16.11■□□□□ 0.17
TPM1-230ENST00000561266 GOLGA8BA8MQT2 603 aa16.11■□□□□ 0.17
TPM1-230ENST00000561266 PSMA5P28066 241 aa16.11■□□□□ 0.17
TPM1-230ENST00000561266 HOXA13P31271 388 aaPredicted RBP16.11■□□□□ 0.17
TPM1-230ENST00000561266 HSD17B4P51659 736 aa16.11■□□□□ 0.17
TPM1-230ENST00000561266 RTN1Q16799 776 aa16.11■□□□□ 0.17
TPM1-230ENST00000561266 CCDC144BQ3MJ40 725 aa16.11■□□□□ 0.17
TPM1-230ENST00000561266 GJC2Q5T442 439 aaPredicted RBP16.11■□□□□ 0.17
TPM1-230ENST00000561266 TAPT1Q6NXT6 567 aa16.11■□□□□ 0.17
TPM1-230ENST00000561266 FBXO16Q8IX29 292 aaPredicted RBP16.11■□□□□ 0.17
TPM1-230ENST00000561266 IL17RAQ96F46 866 aa16.11■□□□□ 0.17
TPM1-230ENST00000561266 NRBP1Q9UHY1 535 aa16.11■□□□□ 0.17
TPM1-230ENST00000561266 PNMA2Q9UL42 364 aa16.11■□□□□ 0.17
TPM1-230ENST00000561266 NAP1L2Q9ULW6 460 aaPredicted RBP16.11■□□□□ 0.17
TPM1-230ENST00000561266 GTF3C3Q9Y5Q9 886 aa16.11■□□□□ 0.17
TPM1-230ENST00000561266 KIAA1217Q5T5P2 1943 aa16.11■□□□□ 0.17
TPM1-230ENST00000561266 MYADML2A6NDP7 307 aa16.1■□□□□ 0.17
TPM1-230ENST00000561266 DTNBO60941 627 aa16.1■□□□□ 0.17
TPM1-230ENST00000561266 PPFIA3O75145 1194 aa16.1■□□□□ 0.17
TPM1-230ENST00000561266 PGK1P00558 417 aa16.1■□□□□ 0.17
TPM1-230ENST00000561266 CFBP00751 764 aa16.1■□□□□ 0.17
TPM1-230ENST00000561266 EDNRBP24530 442 aa16.1■□□□□ 0.17
TPM1-230ENST00000561266 PDIA3P30101 505 aaKnown RBP16.1■□□□□ 0.17
TPM1-230ENST00000561266 GNAQP50148 359 aa16.1■□□□□ 0.17
TPM1-230ENST00000561266 EVCP57679 992 aa16.1■□□□□ 0.17
TPM1-230ENST00000561266 GHRHRQ02643 423 aa16.1■□□□□ 0.17
TPM1-230ENST00000561266 TYW1BQ6NUM6 668 aa16.1■□□□□ 0.17
TPM1-230ENST00000561266 RRP36Q96EU6 259 aaKnown RBP16.1■□□□□ 0.17
TPM1-230ENST00000561266 LZTS2Q9BRK4 669 aa16.1■□□□□ 0.17
TPM1-230ENST00000561266 ABHD16BQ9H3Z7 469 aa16.1■□□□□ 0.17
TPM1-230ENST00000561266 PCDH10Q9P2E7 1040 aa16.1■□□□□ 0.17
TPM1-230ENST00000561266 CNPY2Q9Y2B0 182 aa16.1■□□□□ 0.17
TPM1-230ENST00000561266 CYP46A1Q9Y6A2 500 aa16.1■□□□□ 0.17
TPM1-230ENST00000561266 DNAH12Q6ZR08 3092 aa16.1■□□□□ 0.17
TPM1-230ENST00000561266 ASB14A6NK59 587 aa16.09■□□□□ 0.17
TPM1-230ENST00000561266 COL6A1P12109 1028 aa16.09■□□□□ 0.17
TPM1-230ENST00000561266 ADCYAP1R1P41586 468 aa16.09■□□□□ 0.17
TPM1-230ENST00000561266 FGD1P98174 961 aa16.09■□□□□ 0.17
TPM1-230ENST00000561266 LRRC41Q15345 812 aa16.09■□□□□ 0.17
TPM1-230ENST00000561266 SYNE3Q6ZMZ3 975 aa16.09■□□□□ 0.17
TPM1-230ENST00000561266 GPKOWQ92917 476 aaPredicted RBP eCLIP16.09■□□□□ 0.17
TPM1-230ENST00000561266 NCOA5Q9HCD5 579 aaKnown RBP16.09■□□□□ 0.17
TPM1-230ENST00000561266 PDRG1Q9NUG6 133 aa16.09■□□□□ 0.17
TPM1-230ENST00000561266 NID2Q14112 1375 aa16.09■□□□□ 0.17
TPM1-230ENST00000561266 ADAMTS3O15072 1205 aa16.08■□□□□ 0.16
TPM1-230ENST00000561266 CTAGE5O15320 804 aa16.08■□□□□ 0.16
TPM1-230ENST00000561266 ADAMTS4O75173 837 aa16.08■□□□□ 0.16
TPM1-230ENST00000561266 AKR1A1P14550 325 aa16.08■□□□□ 0.16
TPM1-230ENST00000561266 METAP2P50579 478 aaKnown RBP eCLIP16.08■□□□□ 0.16
TPM1-230ENST00000561266 CCT2P78371 535 aaKnown RBP16.08■□□□□ 0.16
TPM1-230ENST00000561266 NTRK3Q16288 839 aa16.08■□□□□ 0.16
TPM1-230ENST00000561266 ANKLE1Q8NAG6 615 aa16.08■□□□□ 0.16
TPM1-230ENST00000561266 IL31RAQ8NI17 732 aa16.08■□□□□ 0.16
TPM1-230ENST00000561266 ZFP91Q96JP5 570 aaPredicted RBP16.08■□□□□ 0.16
TPM1-230ENST00000561266 RBM28Q9NW13 759 aaKnown RBP16.08■□□□□ 0.16
TPM1-230ENST00000561266 FAM184BQ9ULE4 1060 aa16.08■□□□□ 0.16
TPM1-230ENST00000561266 V9GY48 417 aaPredicted RBP16.08■□□□□ 0.16
TPM1-230ENST00000561266 MSCO60682 206 aa16.07■□□□□ 0.16
TPM1-230ENST00000561266 SMPD1P17405 629 aa16.07■□□□□ 0.16
TPM1-230ENST00000561266 EIF2AK2P19525 551 aaKnown RBP16.07■□□□□ 0.16
TPM1-230ENST00000561266 RCAN1P53805 252 aa16.07■□□□□ 0.16
TPM1-230ENST00000561266 ANAPC15P60006 121 aa16.07■□□□□ 0.16
TPM1-230ENST00000561266 WWC2Q6AWC2 1192 aa16.07■□□□□ 0.16
TPM1-230ENST00000561266 USP17L6PQ6QN14 398 aa16.07■□□□□ 0.16
TPM1-230ENST00000561266 MCF2L2Q86YR7 1114 aa16.07■□□□□ 0.16
TPM1-230ENST00000561266 DNERQ8NFT8 737 aa16.07■□□□□ 0.16
TPM1-230ENST00000561266 RMDN3Q96TC7 470 aa16.07■□□□□ 0.16
TPM1-230ENST00000561266 KIF2CQ99661 725 aa16.07■□□□□ 0.16
TPM1-230ENST00000561266 XPNPEP3Q9NQH7 507 aa16.07■□□□□ 0.16
TPM1-230ENST00000561266 ADD3Q9UEY8 706 aaKnown RBP16.07■□□□□ 0.16
TPM1-230ENST00000561266 GNEQ9Y223 722 aaKnown RBP16.07■□□□□ 0.16
TPM1-230ENST00000561266 SYNRGQ9UMZ2 1314 aa16.07■□□□□ 0.16
TPM1-230ENST00000561266 MYH7BA7E2Y1 1941 aa16.07■□□□□ 0.16
TPM1-230ENST00000561266 MEIS2O14770 477 aa16.06■□□□□ 0.16
TPM1-230ENST00000561266 ARIH2O95376 493 aa16.06■□□□□ 0.16
TPM1-230ENST00000561266 MYCNP04198 464 aaPredicted RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms